CK934433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 1.188e-72 Identity = 158/254 (62.20%), Postives = 182/254 (71.65%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSARE-ALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGY------GLKPAQPQ-GDSFFHALE--CEPTLQIGYQPAD-PISVVTAGPSLNNYMQGWLP 740 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS SM +TL RYQK YG P+ + +E L SS+ EYLKLKAR E LQR+QRNLLGE+LG L KELE LE+QLD SL+ IRSTRTQ+MLD LT+LQ +EQ+L EANK L+++L E Q++ A GY ++ P G+ FFH+LE EPTLQIG+ P S VTA +M WLP Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRKLEESNQLHGQVWEHGATLLGYERQSPHAVQQVPPHGGNGFFHSLEAAAEPTLQIGFTPEQMNNSCVTA------FMPTWLP 248
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 4.671e-69 Identity = 144/246 (58.54%), Postives = 177/246 (71.95%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFH--ALECEPTLQIGYQPA--DPISVVTAGPSLNNYMQGWL 737 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCS+S M KTL RYQ+C YG+ E + ++E SS QEYLKLKA+ + LQRS RNLLGE+LG L++KELE LE QLD SL+QIRS +TQ+MLD L +LQ KE++L E+N+ LK +L E + P+ + + GD FF L C LQIGY A D ++ T+ +++ + QGW+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYGSLETSQPSKET--ESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEE----SCASFRPNWD--------VRQPGDGFFEPLPLPCNNNLQIGYNEATQDQMNATTSAQNVHGFAQGWM 232
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 7.222e-62 Identity = 129/220 (58.64%), Postives = 160/220 (72.73%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQ 671 MGRG+VELKRIENKI+RQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RG+L+EF +SS M KTL RY+ C+Y SA ELS+ QEYLKLK R E LQ +QRNLLGE+L PL+ KELE LE Q+++SL IRS++ Q +LD + EL+ KEQ L +ANK LK+++ E N L + S +D G ++ + HA+ C+P+L IGYQ Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGENMLHI--SCQDVGPSGHASEANQEFLHHAI-CDPSLHIGYQ 217
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 7.222e-62 Identity = 129/220 (58.64%), Postives = 160/220 (72.73%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQ 671 MGRG+VELKRIENKI+RQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RG+L+EF +SS M KTL RY+ C+Y SA ELS+ QEYLKLK R E LQ +QRNLLGE+L PL+ KELE LE Q+++SL IRS++ Q +LD + EL+ KEQ L +ANK LK+++ E N L + S +D G ++ + HA+ C+P+L IGYQ Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKIQETSGENMLHI--SCQDVGPSGHASEANQEFLHHAI-CDPSLHIGYQ 217
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 1.275e-58 Identity = 129/259 (49.81%), Postives = 170/259 (65.64%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS-SSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME----------GYQVNTLQLNPSAEDCGYGLKPAQP--QGDSFFHALECEPTLQI----GYQPADPISVVTAGPSLNNYMQGWL 737 MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+AL+IFSNRGKLYEFCSS S M +T+ +Y+K Y +PN SA++ + Q+YLKLK+R E LQ SQR+LLGEEL ++ ELE LERQ+D SL+QIRST+ + MLD L++L+ KE++L E N+ L+++L + G Q + G + P Q FF L+ LQ+ + PA+ + T ++N + GW+ Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAKDLQD--KYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAALTQSFWGSSAAEQQQQHQQQQQGMSSYQSNPPIQEAGFFKPLQGNVALQMSSHYNHNPANATNSATTSQNVNGFFPGWM 257
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.410e-57 Identity = 135/254 (53.15%), Postives = 171/254 (67.32%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL-MEGYQVNTLQLNPSAEDCG----YGLKPAQPQGDSFFHALECEPTLQIGYQ----PADPISV---VTAGPSLNNYMQGWL 737 MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+ + KTL RYQ C Y A + N + E S E KLKA++EALQR+QR+LLGE+LGPL+ KEL+ LE+QL+ +L Q R +TQ M++ + EL+ KE+ L E N+ LK +L +EG N + ++ G G QP S A++ EPTLQIGY PA+ ++ + NN+M GW+ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSAGITKTLERYQHCCYNAQDSNNALSET--QSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYRAMQQASWAQGAVVENGAAYVQPPPHS--AAMDSEPTLQIGYPHQFVPAEANTIQRSTAPAGAENNFMLGWV 249
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 5.356e-57 Identity = 130/255 (50.98%), Postives = 165/255 (64.71%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED--------CGYGLKPAQPQGDSFFHALECEPTLQIGY------QPADPISVVTAGPSLNNYMQGW 734 MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S+ + KTL +Y C Y A N + S QE +LK + E LQRSQR++LGE+LGPL+ KEL+ LE+QL+ SL Q R +TQ M++ + +L+ KE+ L E NK LK +L + ++ + +D G + AQP D ++CEPTLQIGY + A+P S G NN++ GW Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKLEA--EADSSNCRSAIQDSWVHGTVVSGGRVLNAQPPPD-----IDCEPTLQIGYYQFVRPEAANPRSNGGGGDQNNNFVMGW 247
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 6.996e-57 Identity = 124/225 (55.11%), Postives = 155/225 (68.89%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLN------PSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGY 668 MGRG+VELKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF SSS M KTL RY+ C+Y + + E + QEYLKLK R E LQ +QRN+LGE+LGPL+ KELE LE Q+++SLKQIRS + Q +LD L +L+ KEQ L + NK L+++L E N L ++ S +P QG H + + +LQIGY Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEI----NYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQIGY 221
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 6.996e-57 Identity = 124/225 (55.11%), Postives = 155/225 (68.89%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLN------PSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGY 668 MGRG+VELKRIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVALIIFS RG+L+EF SSS M KTL RY+ C+Y + + E + QEYLKLK R E LQ +QRN+LGE+LGPL+ KELE LE Q+++SLKQIRS + Q +LD L +L+ KEQ L + NK L+++L E N L ++ S +P QG H + + +LQIGY Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEI----NYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKLQETSAENVLHMSWQDGGGHSGSSTVLADQPHHHQGLLHPHPDQGDHSLQIGY 221
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 6.128e-53 Identity = 117/231 (50.65%), Postives = 155/231 (67.10%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYG-------LKPAQPQGDSFFHALECEPTLQIGYQPADP 683 MGRG+V L+RIENKI+RQVTFAKRRNGLLKKAYELS+LCDAEVAL++FS+ G+LY+F SSS+M+KTL RYQ+ Y + + + ++ ++ QEY+ LKA E LQ+SQRNLLGE+L PL + ELE LE Q+ +LKQIRS +TQ +LD L +L+ KEQ+L +AN+ LK++L E P +C G PQ + FF AL + + PA P Sbjct: 1 MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQ-NNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEAAPPQPPWNGNCSNGHGGGGGVFSSEPPQPEHFFQALGLH-AVDVNQPPAPP 229 The following BLAST results are available for this feature:
BLAST of CK934433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934433 ID=CK934433; Name=CK934433; organism=Citrus sinensis; type=EST; length=908bpback to top |