CK934433

Overview
NameCK934433
Unique NameCK934433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.669e-50
Identity = 126/256 (49.22%), Postives = 162/256 (63.28%), Query Frame = 3
Query:   12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL-MEGYQVNTLQ---LNPSAEDCGYGLKPAQPQGDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLN--------NYMQGWL 737
            MGRGRVE+KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF  S  +  T+ RY +C Y     N    E  + S  QE  KLK++YE+L R+ RNLLGE+LG +  KEL++LERQL+ +L   R  +TQ M++ + +L+ KE+ L + NK LK +   EG+   T Q    N +A   G       P   S  + L+C  EP LQIG+Q      V   G S++        N++QGW+
Sbjct:    1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GSVGIESTIERYNRC-YNCSLSNNKPEETTQ-SWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAFKTFQDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQ--QHYYVQGEGSSVSKSNVAGETNFVQGWV 251          
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 8.283e-50
Identity = 116/234 (49.57%), Postives = 153/234 (65.38%), Query Frame = 3
Query:   12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPA---DPISVVTAG 704
            MGRG+V+LKRIENKINRQVTF+KRR+GLLKKA E+SVLCDAEVALIIFS +GKLYE+ + S M K L RY++  Y A +  +SA    + +   EY KLKA+ E +Q+ Q++L+GE+L  LN KEL+ LE+QL+ SLK IRS ++Q ML+++ ELQ KE+ L E NK L++ L+E  +V   Q+           +P      S F   E  PT  I   PA   + I  V AG
Sbjct:    1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSY-AEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQ------TQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAG 227          
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.196e-48
Identity = 114/234 (48.72%), Postives = 152/234 (64.96%), Query Frame = 3
Query:   12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPA---DPISVVTAG 704
            MGRG+V+LKRIEN INRQVTF+KRR+GLLKKA E+SVLCDAEVALIIFS +GKLY++ + S M K L RY++  Y A +  +SA    + +   EY KLKA+ E +Q+ Q++L+GE+L  LN KEL+ LE+QL+ SLK IRS ++Q ML+++ ELQ KE+ L E NK L++ L+E  +V   Q+           +P      S F   E  PT  I   PA   + I  V AG
Sbjct:    1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSY-AEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQ------TQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAG 227          
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.322e-47
Identity = 108/238 (45.38%), Postives = 157/238 (65.97%), Query Frame = 3
Query:   12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYG-----APEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNP-SAEDCGYGLKPAQPQGD---SFFHALECEPTLQIG--YQPADPISV 692
            MGRGRV+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS++GKL+E+ + S M K L RY++  Y      APE +V+   ++      EY +LKA+ E L+R+QR+ LGE+L  ++SKEL++LE+QLD +LK IRS + Q M D++ ELQ KE+ + E N  L +++ E  ++   Q      ++ G+ + P  P       +  + +  P L +G  YQ  DP+ +
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSM------EYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNHGHNMPPPPPPQQIQHPYMLSHQPSPFLNMGGLYQEEDPMEM 232          
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 8.571e-47
Identity = 113/242 (46.69%), Postives = 153/242 (63.22%), Query Frame = 3
Query:   12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYG-----APEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL------KQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFH------ALECEPTLQIG--YQPAD 680
            MGRGRVELKRIENKINRQVTF+KRR GLLKKA E+SVLCDAEV+LI+FS++GKL+E+ S S M K L RY++  Y      AP+ +V+A    + +   EY +LKA+ E L+R+QR+ LGEEL P++ K+L++LE+QL+ +LK IRS + Q M ++L  LQ KE+ + E N  L      ++ ++   Q    QLN S +D         PQ   F H      A +  P L +G  YQ  D
Sbjct:    1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNA----QTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQCEQLNRSVDDV--------PQPQPFQHPHLYMIAHQTSPFLNMGGLYQEED 230          
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.462e-46
Identity = 98/175 (56.00%), Postives = 132/175 (75.43%), Query Frame = 3
Query:   12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLME 536
            MGRG+V+LKRIENKINRQVTF+KRRNGLLKKA+E+SVLCDAEVA I+FS +GKLYE+ + S M K L RY++  Y A +  +SA    E +   EY KLKA+ E +Q+  ++L+GE+L  LN KEL+ LE+QL+ SLK I S ++  ML++++ELQ KE+ L E NK L++ L+E
Sbjct:    1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSY-AEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVE 174          
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 4.254e-46
Identity = 107/240 (44.58%), Postives = 158/240 (65.83%), Query Frame = 3
Query:   12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYG-----APEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNP-SAEDCGYGL-KPAQPQGDSFFH----ALECEPTLQIG--YQPADPISV 692
            MGRGRV+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS++GKL+E+ + S M K L RY++  Y      APE +V+   ++      EY +LKA+ E L+R+QR+ LGE+L  ++ KEL++LE+QLD +LK IR+ + Q M +++ ELQ KE+ + E N  L +++ E  ++   Q      ++ G+ +  P  PQ     H    + +  P L +G  YQ  DP+++
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSM------EYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPMAM 234          
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.023e-45
Identity = 100/193 (51.81%), Postives = 133/193 (68.91%), Query Frame = 3
Query:   12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDY---GAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED 581
            MGRG V+L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+FS +GKLYEF S SSM   L RYQ+  +      EPN   +E    +   EY  LK++ +ALQ+SQR LLGE+L  L  KEL+ LE QL+ SLK IRS + Q + ++++ELQ KE+ L   N  L++ +    + N   +N + E+
Sbjct:    1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQE----NWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAIINTNREE 189          
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 8.023e-45
Identity = 100/193 (51.81%), Postives = 133/193 (68.91%), Query Frame = 3
Query:   12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDY---GAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAED 581
            MGRG V+L+RIENKINRQVTF+KRRNGLLKKA+E+SVLCDA+VALI+FS +GKLYEF S SSM   L RYQ+  +      EPN   +E    +   EY  LK++ +ALQ+SQR LLGE+L  L  KEL+ LE QL+ SLK IRS + Q + ++++ELQ KE+ L   N  L++ +    + N   +N + E+
Sbjct:    1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQE----NWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAIINTNREE 189          
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.581e-43
Identity = 98/204 (48.04%), Postives = 138/204 (67.65%), Query Frame = 3
Query:   12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPE---PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQ 614
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVAL+IFS++GKL+E+ + S M K L RY +  Y   +    ++S  E   L    E+ KLKAR E L++++RN +GE+L  L+ KEL+SLE QL  ++K IRS + Q M ++++ LQ K+++L + N  L +++ E  + NT+        C       QPQ
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVL----EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKE-REKNTVHQEVQLIQCSNNSSILQPQ 199          
The following BLAST results are available for this feature:
BLAST of CK934433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
AGL6_ARATH1.669e-5049.22Agamous-like MADS-box protein AGL6 OS=Arabidopsis ... [more]
MAD14_ORYSJ8.283e-5049.57MADS-box transcription factor 14 OS=Oryza sativa s... [more]
MAD14_ORYSI1.196e-4848.72MADS-box transcription factor 14 OS=Oryza sativa s... [more]
AP1_SINAL1.322e-4745.38Floral homeotic protein APETALA 1 OS=Sinapis alba ... [more]
CAL_ARATH8.571e-4746.69Transcription factor CAULIFLOWER OS=Arabidopsis th... [more]
MAD15_ORYSJ1.462e-4656.00MADS-box transcription factor 15 OS=Oryza sativa s... [more]
AP1_ARATH4.254e-4644.58Floral homeotic protein APETALA 1 OS=Arabidopsis t... [more]
MAD18_ORYSJ8.023e-4551.81MADS-box transcription factor 18 OS=Oryza sativa s... [more]
MAD18_ORYSI8.023e-4551.81MADS-box transcription factor 18 OS=Oryza sativa s... [more]
AGL8_SINAL2.581e-4348.04Agamous-like MADS-box protein AGL8 homolog OS=Sina... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_B02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934433 ID=CK934433; Name=CK934433; organism=Citrus sinensis; type=EST; length=908bp
GGGGGAAGAAAATGGGAAGGGGTAGGGTTGAGTTGAAGAGGATAGAGAAC
AAGATCAACAGGCAAGTGACCTTTGCAAAGAGAAGAAATGGCCTTTTGAA
GAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCTGAGGTTGCTCTCATCA
TTTTCTCCAATAGAGGAAAGCTGTACGAGTTTTGCAGTAGTTCAAGCATG
GTCAAAACGCTTGTGAGGTACCAGAAGTGCGACTATGGAGCACCAGAACC
GAATGTGTCCGCAAGGGAGGCCCTGGAGCTAAGTAGCCAGCAAGAATATC
TGAAGCTTAAAGCACGATATGAAGCCCTACAGAGATCCCAAAGGAATCTC
CTTGGAGAAGAACTTGGCCCTCTAAACAGCAAAGAGCTTGAGTCACTTGA
AAGGCAGCTTGATATGTCATTGAAGCAGATTAGATCAACAAGAACTCAGT
ACATGCTGGATACCCTTACTGAACTGCAACATAAGGAACAGTTGCTGAGC
GAAGCAAATAAGACCCTCAAACAAAGGTTGATGGAGGGATACCAAGTGAA
CACACTTCAATTGAATCCTAGTGCAGAAGATTGTGGTTATGGGCTTAAAC
CAGCTCAACCTCAGGGCGATAGCTTCTTTCACGCCTTGGAATGTGAACCC
ACATTGCAAATTGGATACCAGCCTGCGGACCCAATATCGGTTGTCACAGC
AGGCCCGAGTCTGAATAATTACATGCAAGGATGGCTACCATGCTAAGAGA
GCGGCGGGCATTACCAGTCAATGTATTGTAGTTGATCCATAAGAATCAGC
AACTTTGTATCCCTTTGTAAGCAACCCTATTCAGTGGCTAGGAAACACGC
ATCATAAGGATTTATTATAATAACTCTANAGTGATCCTGCACTTTAGGGA
AACTGATG
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