CK934433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 7.307e-22 Identity = 68/194 (35.05%), Postives = 111/194 (57.22%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRY----QKCDYGAPEPNV--------------SAREALELSSQQEYLKLKARYEALQRSQ---RNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 530 M R R E++RIE+ RQVTF+KRR GL KKA EL+VLCDA+VAL++FS+ GKL +F +SS+M + + +Y + +P++ ++ + L Q E+ K + E L + R + GEEL L+ +EL+ +E+ L+ L+++ T+ Q + ++ELQ K L+E N L+ ++ Sbjct: 1 MARERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQF-ASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQM 193
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 103.605 bits (257), Expect = 1.628e-21 Identity = 66/183 (36.07%), Postives = 103/183 (56.28%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSS------MVKTLVRYQ----KCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 530 MGRG++E+KRIEN NRQVTF+KRR G+LKKA E+ VLCDAEV ++IFS+ GKL ++C+ + + + L +YQ K + ++SA E ++K + +Q R++ GE+L L KEL ++E L+ +R M+D + E++L + +K L R+ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSA----------EIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDEHKMLAFRV 169
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.777e-21 Identity = 67/195 (34.36%), Postives = 107/195 (54.87%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGL 596 M RG++++KRIEN+ NRQVT++KRRNGL KKA+EL+VLCDA V++I+FS+ KL+E+ S ++ K +V D +V Q+ KL L+ + LGE L L+ +EL LE +++ + K +R + + + + + + K + + K L ++ L+L AED YGL Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIV-----DLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNL---------IHELELR--AEDPHYGL 179
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.524e-19 Identity = 60/174 (34.48%), Postives = 100/174 (57.47%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 530 MGRG++E+++IENK NRQVTF+KRRNG++KKA EL+VLCDA+V+L++ S+ KL+ + S S+ K YQK + V Q+++ K+ L+R +G +L L EL +L+++++ ++ QIR+ + + + + K + L E + L L Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIE------GVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKNLEERHTDLVMEL 168
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.789e-19 Identity = 69/205 (33.66%), Postives = 110/205 (53.66%), Query Frame = 3 Query: 90 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYL---KLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQ--LNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQ-IGYQPADP 683 GLLKKA EL++LCDA++ +IIFS+ GK++EF S SM + + RYQK +S A +QQ Y ++K + LQ + R+ GE+L L E+ LE+QL++S+ ++RS + Q + L L+ KE +L E N+ L + + + + + Q ++PS D +G+ + L+ P L QPA P Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQK---------LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNRELYRVIQDHHAASMEQKMVDPSMLD-HFGVFYQDDHQAARSSMLQLSPQLHPFRLQPAQP 196
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.401e-18 Identity = 61/198 (30.81%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS--SMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLK 599 MGRGR E+KRIEN RQ TF KRR+GL KKA EL+VLCDA++ L++FS GKLY F S + S+ + + RY+ + ++ EL K+ + + L++ R + ++ LE+LE L+ +++++RS + + + + LQ+ + E L ++ + ++ ++ G LK Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELE------KVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQNIIRGRQEERYGLCDKIAHAQTLKDVECGSTSLSNGLDLK 192
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.587e-16 Identity = 42/89 (47.19%), Postives = 66/89 (74.16%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALE 278 MGR ++++ RI ++ NRQVTF KR+ G++KKAYELSVLCD E+ALIIFS+ KLY++ +S+ M + L++Y +Y P +++ + +E Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQY-ASTDMDRVLLKY--TEYNEPHESLTNKNIIE 86
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MEF2A_RAT (Myocyte-specific enhancer factor 2A OS=Rattus norvegicus GN=Mef2a PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.587e-16 Identity = 43/96 (44.79%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEY 299 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L++Y +Y P + + + +E +++E+ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKY--TEYNEPHESRTNSDIVEALNKKEH 93
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MEF2A_PIG (Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.587e-16 Identity = 43/96 (44.79%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEY 299 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L++Y +Y P + + + +E +++E+ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKY--TEYNEPHESGTNSDIVEALNKKEH 93
BLAST of CK934433 vs. ExPASy Swiss-Prot
Match: MEF2A_HUMAN (Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.587e-16 Identity = 43/96 (44.79%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 12 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLVRYQKCDYGAPEPNVSAREALELSSQQEY 299 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L++Y +Y P + + + +E +++E+ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQY-ASTDMDKVLLKY--TEYNEPHESRTNSDIVEALNKKEH 93 The following BLAST results are available for this feature:
BLAST of CK934433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934433 ID=CK934433; Name=CK934433; organism=Citrus sinensis; type=EST; length=908bpback to top |