CK934436

Overview
NameCK934436
Unique NameCK934436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14
Identity = 50/134 (37.31%), Postives = 67/134 (50.00%), Query Frame = 2
Query:  203 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 601
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAG   NGSQFF T      L+ +H +FGKV    D VY +
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTVYNM 141          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.639e-14
Identity = 59/169 (34.91%), Postives = 80/169 (47.34%), Query Frame = 2
Query:  158 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGT--PKSKVVIAD 655
            I NK Y  +E      G + + L  +  PK   NF  L   EKG        +Y+   FHR I +FM+Q             SI+G+ F DE      H+  G++SMAN G +TN SQFFIT    S LD +H +F KV+ G D           +G+  P +K+VI D
Sbjct:  326 IKNKGYVRMETN---LGPLTLELLPEFAPKAVWNFLRL--SEKG--------YYRDVAFHRSIRNFMIQGGDPSGTGRGG-SSIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKVIEGQDTTLTAMENVATDGSDRPLNKIVIKD 480          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: CWC27_RHIOR (Peptidyl-prolyl isomerase cwc27 OS=Rhizopus oryzae GN=cwc27 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14
Identity = 57/175 (32.57%), Postives = 81/175 (46.29%), Query Frame = 2
Query:  116 SSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG--MDVVYKVEAEGRQNGTP 631
            S+I A +   N K I +    D+EI           L+GK  P+   NF  LC             +Y  + FHRI+P F++Q            ES+Y + FPDE + +L+    GL+ +AN G + NGSQFFIT      L  RH +FG+V      +V+   E E  +N  P
Sbjct:    2 SNIYALEPHTNAKVILHTTSGDIEIE----------LWGKEAPRATRNFIQLCLEG----------YYDNTIFHRIVPGFLVQGGDPTGTGQGG-ESVYEDGFPDEFHSRLRFNRRGLVGVANTGQNDNGSQFFITLDRADELTKRHTLFGRVAGDTLFNVMKMTELEIDENERP 155          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13
Identity = 64/180 (35.56%), Postives = 81/180 (45.00%), Query Frame = 2
Query:  206 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT---------------------------TSWLDGRHVVFGKVLSG-----MDVVYKVEAEGRQNGTPKSKVVI 649
            G + + LF    PKT  NF        G+ K G   +Y G  FHRIIP FM+Q            +SIYGE F DE     +   G LSMANAGP+TNGSQFFI   +                           T  LD RH VFG+++       +D++  VE  G Q+  PK  V+I
Sbjct:  297 GDMTLVLFPDHAPKTVANFL-------GLAKEG---YYDGIIFHRIIPEFMIQGGDPTGTGMGG-QSIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLVDETSFQVLDLIAGVET-GAQD-KPKEDVII 463          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.655e-13
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 2
Query:  314 HYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIAD 655
            +Y+ + FHR I  FM+Q            +SI+G+ F DE    LKH   G++SMAN G +TNGSQFFI       LD +H +FG+V+ G++V+  +E      N  PK  + + D
Sbjct:  311 YYRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIKLED 425          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.234e-13
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = 2
Query:  206 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMD 586
            G I + +F  A P+ AENF   C              Y    +HR I SFM+Q            +SI+G+ F DE    LK    G+++ ANAGPDTN SQFFIT      LDG++ + GKV+ G +
Sbjct:   10 GDIKVEVFCDATPRAAENFLGHCAAGT----------YNDVKWHRNIKSFMIQTGDPTGTGKGG-QSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVIDGAE 126          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPI1_STAES (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0648 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13
Identity = 55/153 (35.95%), Postives = 66/153 (43.14%), Query Frame = 2
Query:  206 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVLSG 580
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMANAGP+TNGSQFFI  +                             T WLD +H VFG+++ G
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTH-------SKNG---YYDGVTFHRVINDFMVQGGDPTATGMGG-ESIYGSAFEDEFSLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQLIEG 166          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPI1_STAEQ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0540 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13
Identity = 55/153 (35.95%), Postives = 66/153 (43.14%), Query Frame = 2
Query:  206 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVLSG 580
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMANAGP+TNGSQFFI  +                             T WLD +H VFG+++ G
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTH-------SKNG---YYDGVTFHRVINDFMVQGGDPTATGMGG-ESIYGSAFEDEFSLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQLIEG 166          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPI1_STAHJ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1997 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 54/153 (35.29%), Postives = 66/153 (43.14%), Query Frame = 2
Query:  206 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVLSG 580
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMANAGP+TNGSQFF+  +                             T WLD +H VFG+++ G
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGSFEDEFSLEAFNLYGALSMANAGPNTNGSQFFVVQMKEVPESMVNQLVDGGWPEPIAKAYADNGGTPWLDQKHTVFGQLIEG 166          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: CWC27_CRYNE (Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus neoformans GN=CWC27 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12
Identity = 49/126 (38.89%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  203 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGP-DTNGSQFFITTVTTSWLDGRHVVFGKVL 574
            AG I + L+GK  PK   NF AL              +Y G  FHR++P F++Q            ES YGE F DE + +LK    GLL MAN G  ++N SQFFIT      L  +H +FGK++
Sbjct:   21 AGEIEVELWGKECPKAVRNFLALTMEG----------YYDGVIFHRVVPGFIIQSGDPTGTGMGG-ESFYGEPFEDEIHGRLKFNRRGLLGMANNGSRNSNTSQFFITLDAAPELTNKHTMFGKIV 135          
The following BLAST results are available for this feature:
BLAST of CK934436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
SDC10_HUMAN3.306e-1437.31Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
PPIL2_NEUCR5.639e-1434.91Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]
CWC27_RHIOR9.618e-1432.57Peptidyl-prolyl isomerase cwc27 OS=Rhizopus oryzae... [more]
BPPI_STRP61.641e-1335.56Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
PPIL2_SCHPO3.655e-1337.93Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
PPIL3_USTMA6.234e-1337.50Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]
PPI1_STAES8.142e-1335.95Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAEQ8.142e-1335.95Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAHJ1.063e-1235.29Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
CWC27_CRYNE1.389e-1238.89Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus ne... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_B07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934436 ID=CK934436; Name=CK934436; organism=Citrus sinensis; type=EST; length=770bp
GGGGGGAACCCCAAAGTGAGTGACTGCGAAACGAGAAACAACGAAGTGAT
ACATGGCTTCGACAAATTTGCTTCCACTCACGATGCTATGGGCTGTTGTC
CTGTTGGCCACTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTT
GAAAGAAATCACAAACAAAGTTTACTTTGACGTTGAGATTGCCGGAAAAC
CTGCCGGACGTATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACT
GCAGAAAATTTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAG
TGGGAAGCCACTCCACTACAAGGGAAGTACGTTTCATAGGATTATTCCCA
GCTTTATGCTTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGA
GAGTCAATTTATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCA
CACCGGCCCAGGGCTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATG
GTTCACAATTCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGG
CATGTTGTATTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGT
TGAAGCTGAAGGGAGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCATTG
CAGACAGCGGTGAACTTCCTCTGTGATTTCCCCCATAATTATATAATTAC
GCTATACACCTTTTTAATCCTCTCGTCTTTTCAACCTTCATGAAGATACT
CTTAATTTGCCTATTTATCA
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