CK934436

Overview
NameCK934436
Unique NameCK934436
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:21..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 1.018e-47
Identity = 99/167 (59.28%), Postives = 114/167 (68.26%), Query Frame = 2
Query:  167 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 664
            +V+FDV+I G+  GRIV+ LF   VPKTAENFRALCTGEKG G + GKPLH+KG  FHRII  FM+Q            ESIYGEKF DENF  KH   GLLSMANAGP+TNGSQFFITTV T  LDG+HVVFG+V+ G+ V   +E        P    VIA+ GE
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENVEVNGEKPAKLCVIAECGE 183          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.018e-47
Identity = 95/165 (57.58%), Postives = 112/165 (67.88%), Query Frame = 2
Query:  170 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 664
            VYFDV   G+  G+I   L+   VPKTAENFRALCTGEKG G       YKGS FHR+IP FMLQ            +SIYG KF DENF  +H  PGLLSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V  G+D+V K+E+ G  +G    K+VI +SG+
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFGSGSGATSKKIVIEESGQ 161          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.330e-47
Identity = 99/170 (58.24%), Postives = 118/170 (69.41%), Query Frame = 2
Query:  158 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIADSGE 664
            I NKV+F ++    P GR+V  L+   VPKTAENFRALCTGEKGIGKSGKPLHYKGS+FHR+I +FM+Q            ESIYG  F DENF +KH   G LSMANAG +TNGSQFFITT  T  L+G H VFG+V+ G D+V KVE AE  ++  PK+  VI D G+
Sbjct:    5 IRNKVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVENAETDRSDRPKAACVIEDCGQ 173          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.268e-47
Identity = 98/167 (58.68%), Postives = 115/167 (68.86%), Query Frame = 2
Query:  164 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 664
            ++VY D++I    AGRI + L G  VPKTAENFRALCTGE G G       YK S+FHRIIP FM Q            +SIYG KF DENF LKHTGPG LSMANAG +TNGSQFFI T  T+WLDG+HVVFG+V+SGM+VV ++E  G  +G P  +VVI D GE
Sbjct:  155 SRVYLDIQIGNTLAGRIEIELRGDVVPKTAENFRALCTGEAGFG-------YKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASGKPSKRVVIVDCGE 314          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.268e-47
Identity = 107/200 (53.50%), Postives = 124/200 (62.00%), Query Frame = 2
Query:   68 LLPLTMLWAVVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ-NGTPKSKVVIADSGE 664
            LLPL +   V L A   S  A    +    +T KV+FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKVL GM VV+ +E +    +  P +   I +SG+
Sbjct:    8 LLPLVL--CVGLSALVPSAGASGFRKRGPSVTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPFTDCSIVNSGK 198          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.268e-47
Identity = 99/166 (59.64%), Postives = 112/166 (67.47%), Query Frame = 2
Query:  167 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 664
            K +FD+ I GKPAGRIV  LF   VPKT ENFRALCTGEKG G       YKGS FHRIIP FM Q            +SIYG KF DENF  KH+ P +LSMANAG +TNGSQFFITT  TSWLDG+HVVFG+V SG DVV  +EA G  +G    +V+I D G+
Sbjct:    4 KCFFDISIGGKPAGRIVFALFDD-VPKTVENFRALCTGEKGFG-------YKGSKFHRIIPGFMCQGGDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDGKHVVFGEVESGEDVVKDMEAVGSSSGKTSQEVLITDCGQ 161          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 188.734 bits (478), Expect = 2.962e-47
Identity = 104/183 (56.83%), Postives = 122/183 (66.67%), Query Frame = 2
Query:  119 SIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 664
            S QAK S+ +      +V+FDV+I G+  GRIV+ LF   VPKTAENFRALCTGEKGIG + GKPLH+KG  FHRII  FM+Q            ESIYGEKF DENF  KH   GLLSMANAG +TNGSQFFITTV T  LDG+HVVFG+V+ G+ V   +E    +   P    VIA+ GE
Sbjct:    5 SPQAKPSNPS----NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGE 183          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPIC_MOUSE (Peptidyl-prolyl cis-trans isomerase C OS=Mus musculus GN=Ppic PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.869e-47
Identity = 104/201 (51.74%), Postives = 125/201 (62.19%), Query Frame = 2
Query:   74 PLTMLWAVVLLATFSSIQAKKSDQNLKE---ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ-NGTPKSKVVIADSGE 664
            P  +L AV+ L   + + +  S    K    +T+KV+FDV I  K  GRIV+GLFG  VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKVL GM VV+ +E +    +  P +   I +SG+
Sbjct:    5 PRLLLPAVLCLGLGALVSSSGSSGVRKRGPSVTDKVFFDVRIGDKDVGRIVIGLFGNVVPKTVENFVALATGEKGYG-------YKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPLTDCTIVNSGK 198          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.053e-47
Identity = 106/200 (53.00%), Postives = 125/200 (62.50%), Query Frame = 2
Query:   68 LLPLTMLWAVVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ-NGTPKSKVVIADSGE 664
            LLPL +   V L A   S  A+   +    +T KV+FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKV+ GM VV+ +E +    +  P +   I +SG+
Sbjct:    8 LLPLVL--CVGLGALVFSSGAEGFRKRGPSVTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSIINSGK 198          
BLAST of CK934436 vs. ExPASy Swiss-Prot
Match: CYP6_CAEEL (Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhabditis elegans GN=cyn-6 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.053e-47
Identity = 100/188 (53.19%), Postives = 125/188 (66.49%), Query Frame = 2
Query:  101 LLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVIADSG 661
            LL    +I A  ++     +T+KV+FD+EI G+P G+IV+GLFG+ VPKT +NF  L    +G G       Y GS FHR+I +FM+Q             SIYGE+F DENFKL+H GPG LSMANAG DTNGSQFFITT  TSWLDG+HVVFGK+L GMDVV ++EA  +  G  P   VVIA++G
Sbjct:    5 LLFFVLAILALSAEARGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEG-------YVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIEDVVIANAG 185          
The following BLAST results are available for this feature:
BLAST of CK934436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPID_RAT1.018e-4759.2840 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPIA_CANAL1.018e-4757.58Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPID_DICDI1.330e-4758.24Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
PPIE_RHIOR2.268e-4758.68Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIC_BOVIN2.268e-4753.50Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPIA_ECHGR2.268e-4759.64Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]
PPID_HUMAN2.962e-4756.8340 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPIC_MOUSE3.869e-4751.74Peptidyl-prolyl cis-trans isomerase C OS=Mus muscu... [more]
PPIC_HUMAN5.053e-4753.00Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
CYP6_CAEEL5.053e-4753.19Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004259_B07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934436 ID=CK934436; Name=CK934436; organism=Citrus sinensis; type=EST; length=770bp
GGGGGGAACCCCAAAGTGAGTGACTGCGAAACGAGAAACAACGAAGTGAT
ACATGGCTTCGACAAATTTGCTTCCACTCACGATGCTATGGGCTGTTGTC
CTGTTGGCCACTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTT
GAAAGAAATCACAAACAAAGTTTACTTTGACGTTGAGATTGCCGGAAAAC
CTGCCGGACGTATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACT
GCAGAAAATTTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAG
TGGGAAGCCACTCCACTACAAGGGAAGTACGTTTCATAGGATTATTCCCA
GCTTTATGCTTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGA
GAGTCAATTTATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCA
CACCGGCCCAGGGCTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATG
GTTCACAATTCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGG
CATGTTGTATTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGT
TGAAGCTGAAGGGAGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCATTG
CAGACAGCGGTGAACTTCCTCTGTGATTTCCCCCATAATTATATAATTAC
GCTATACACCTTTTTAATCCTCTCGTCTTTTCAACCTTCATGAAGATACT
CTTAATTTGCCTATTTATCA
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