CK934457

Overview
NameCK934457
Unique NameCK934457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934457_ssr457 microsatellite CK934457_ssr457:457..471. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20
Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLE 670
            E   YRGVRRRPWG+YAAEIRD  + G RVWLGTF+TA EAA+AYD AA+ +RG  AILNFP E
Sbjct:   11 EHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPHE 74          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20
Identity = 45/63 (71.43%), Postives = 52/63 (82.54%), Query Frame = 2
Query:  482 EKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLE 670
            E  YRGVR+RPWG+YAAEIRD  R G+RVWLGTF TA +AA+AYD AAF +RG +AILNFP E
Sbjct:   11 EMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHE 73          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.593e-20
Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLE 670
            E+  YRGVRRRPWG+YAAEIRD  + G RVWLGTF+TA +AA+AYD AA+ +RG  AILNFP E
Sbjct:   16 EQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHE 79          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20
Identity = 45/65 (69.23%), Postives = 52/65 (80.00%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLEV 673
            EE+ YRGVR+RPWG++AAEIRD  R G RVWLGTF+ A EAA AYD AAF  +GS A LNFP+EV
Sbjct:   82 EERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEV 146          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum GN=ERF4 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.540e-20
Identity = 47/62 (75.81%), Postives = 51/62 (82.26%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            +E HYRGVR+RPWGRYAAEIRDP +K SRVWLGTF+TA EAAKAYD AA   RG KA  NFP
Sbjct:   23 KEVHYRGVRKRPWGRYAAEIRDPGKK-SRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana GN=ERF9 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.246e-19
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPL 667
            +E H+RGVR+RPWGRYAAEIRDP +K +RVWLGTF+TA EAA+AYD AA   RGSKA  NFPL
Sbjct:   29 KEVHFRGVRKRPWGRYAAEIRDPGKK-TRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPL 90          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.776e-19
Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 2
Query:  485 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLEVG 676
            K YRGVR+RPWG++AAEIRDP+ K +RVWLGTFETA  AA+AYD AA R RGSKA LNFP  VG
Sbjct:   59 KKYRGVRQRPWGKWAAEIRDPH-KATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVG 121          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.776e-19
Identity = 45/65 (69.23%), Postives = 54/65 (83.08%), Query Frame = 2
Query:  485 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLEVGG 679
            +HYRGVR+RPWG++AAEIRDP +K +RVWLGTFETA EAA AYD AA + +G+KA LNFP  V G
Sbjct:   37 RHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQG 100          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.625e-19
Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPL 667
            +E  YRGVRRRPWGRYAAEIRDP +K  RVWLG+F T  EAA+AYD+AA R RGSKA  NFPL
Sbjct:   49 KEVRYRGVRRRPWGRYAAEIRDPVKK-KRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFPL 110          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 44/61 (72.13%), Postives = 53/61 (86.89%), Query Frame = 2
Query:  482 EKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            ++HYRGVR+RPWG++AAEIRDP +K +RVWLGTFETA  AA AYDNAA + +GSKA LNFP
Sbjct:   89 KRHYRGVRQRPWGKWAAEIRDP-QKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFP 148          
The following BLAST results are available for this feature:
BLAST of CK934457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
ERF96_ARATH4.282e-2070.31Ethylene-responsive transcription factor ERF096 OS... [more]
ERF95_ARATH4.282e-2071.43Ethylene-responsive transcription factor ERF095 OS... [more]
ERF97_ARATH5.593e-2068.75Ethylene-responsive transcription factor 14 OS=Ara... [more]
ERF93_ARATH9.540e-2069.23Ethylene-responsive transcription factor 15 OS=Ara... [more]
ERF4_TOBAC9.540e-2075.81Ethylene-responsive transcription factor 4 OS=Nico... [more]
ERF80_ARATH1.246e-1973.02Ethylene-responsive transcription factor 9 OS=Arab... [more]
RAP26_ARATH2.776e-1973.44Ethylene-responsive transcription factor RAP2-6 OS... [more]
EF113_ARATH2.776e-1969.23Ethylene-responsive transcription factor ERF113 OS... [more]
ERF77_ARATH3.625e-1973.02Ethylene-responsive transcription factor 10 OS=Ara... [more]
EF115_ARATH4.734e-1972.13Ethylene-responsive transcription factor ERF115 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_G07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934457 ID=CK934457; Name=CK934457; organism=Citrus sinensis; type=EST; length=685bp
GGGGAAAATACACCAAACCAATTTCCATTTACATTTCATCTCATCTTCAA
TACCAACTGTAGCTTTTCTTTTAAATATGGCATCTCTGAATGAAGCATCA
ACTTTAGAACTCATCAGCCAGTATCTTCTCGCTGATCAGTACTTTACTTC
TTCAATTGATCATACCCATAGCTTCAAAAATATCTCAAACCTTCCTCAAA
GCCCGAGCTTATTCAACAACCCAACAACAACTACAACAGCAACAACAGTT
ACTACTACAACTGATCGTGATAATATAAACAGCAGAAACAAGCCTTCAAG
CACTTTAAAACAACGGAAGCCGGCCTGTGTAAAAAACGTAACCATACCCC
AAACTACAAGCTTCAATTTGATGAGCTGCTCCAATGTTAATGATGATGCT
GATAACCCAGTTGCTGTGAAAAATAAAGATCCAGATGCTGCTGCTGATAA
TAATACTAATAATAATAATAAAAATAATGAGGAAAAGCATTACAGAGGAG
TAAGGAGACGGCCGTGGGGCAGGTATGCAGCTGAAATCCGGGACCCGAAT
AGAAAAGGGAGCCGGGTTTGGCTTGGGACTTTTGAAACTGCCGTGGAAGC
CGCCAAAGCTTATGACAACGCTGCGTTTAGGCTGCGTGGAAGCAAAGCGA
TATTGAATTTCCCTCTCGAAGTTGGCGGGACTTTG
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