CK934457

Overview
NameCK934457
Unique NameCK934457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934457_ssr457 microsatellite CK934457_ssr457:457..471. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF86_ARATH (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF086 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14
Identity = 40/61 (65.57%), Postives = 45/61 (73.77%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            E   + GVRRRPWGRYAAEIRDP  K  R WLGTF+TA EAA AYD AA  +RG++A  NF
Sbjct:   32 EPGRFLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAHEAALAYDRAALSMRGTQARTNF 91          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14
Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  485 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            K YRGVR+R WG++ AEIR P R  +R+WLGTF+TA EAA AYD  AF+LRG  A LNFP
Sbjct:  185 KLYRGVRQRHWGKWVAEIRKP-RNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFP 243          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: RAP21_ARATH (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 36/60 (60.00%), Postives = 47/60 (78.33%), Query Frame = 2
Query:  485 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            K YRG+RRR WG++ AEIR+PN++ SR+WLG++ T + AA+AYD A F LRG  A LNFP
Sbjct:   29 KPYRGIRRRKWGKWVAEIREPNKR-SRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFP 87          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            + GVRRRPWGRYAAEIRDP  K  R WLGTF+TA EAA AYD AA  +RG++A  NF
Sbjct:   20 FLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAEEAALAYDRAARSMRGTRARTNF 75          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF87_ARATH (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 41/61 (67.21%), Postives = 44/61 (72.13%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            EE  Y GVRRRPWGRYAAEIR+P  K  R WLGTF+TA EAA AYD AA  +RG  A  NF
Sbjct:   35 EEIKYVGVRRRPWGRYAAEIRNPTTK-ERYWLGTFDTAEEAALAYDRAARSIRGLTARTNF 94          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 2
Query:  485 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            K YRGVR+R WG++ AEIR P R  +R+WLGTF+TA EAA AYD AA++LRG  A LNFP
Sbjct:  150 KLYRGVRQRHWGKWVAEIRLP-RNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFP 208          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF58_ARATH (Ethylene-responsive transcription factor ERF058 OS=Arabidopsis thaliana GN=ERF058 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 2
Query:  485 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            K YRGVR+R WG++ AEIR P R  +R+WLGTF+TA EAA AYD AA++LRG  A LNFP
Sbjct:   81 KLYRGVRQRHWGKWVAEIRLP-RNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFP 139          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF57_ARATH (Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  485 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            K YRGVR+R WG++ AEIR P  + +R+WLGTFETA EAA AYD AA ++RG  A LNFP
Sbjct:  109 KLYRGVRQRQWGKWVAEIRLPKNR-TRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFP 167          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF62_ARATH (Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 2
Query:  485 KHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            K YRGVR+R WG++ AEIR P R  +RVWLGTFETA +AA AYD AA+ LRG  A LNFP
Sbjct:  230 KLYRGVRQRHWGKWVAEIRLP-RNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFP 288          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 38/61 (62.30%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  482 EKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            +K YRGVR+R WG++ AEIR P  + +R+WLGTF+TA EAA AYD AA++LRG  A LNFP
Sbjct:   90 QKLYRGVRQRHWGKWVAEIRLPKNR-TRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFP 149          
The following BLAST results are available for this feature:
BLAST of CK934457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
ERF86_ARATH1.576e-1465.57Ethylene-responsive transcription factor ERF086 OS... [more]
ERF53_ARATH1.576e-1465.00Ethylene-responsive transcription factor ERF053 OS... [more]
RAP21_ARATH2.688e-1460.00Ethylene-responsive transcription factor RAP2-1 OS... [more]
LEP_ARATH3.511e-1468.42Ethylene-responsive transcription factor LEP OS=Ar... [more]
ERF87_ARATH3.511e-1467.21Ethylene-responsive transcription factor ERF087 OS... [more]
RAP24_ARATH4.586e-1465.00Ethylene-responsive transcription factor RAP2-4 OS... [more]
ERF58_ARATH4.586e-1465.00Ethylene-responsive transcription factor ERF058 OS... [more]
ERF57_ARATH4.586e-1463.33Ethylene-responsive transcription factor ERF057 OS... [more]
ERF62_ARATH5.989e-1466.67Ethylene-responsive transcription factor ERF062 OS... [more]
ERF60_ARATH5.989e-1462.30Ethylene-responsive transcription factor ERF060 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_G07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934457 ID=CK934457; Name=CK934457; organism=Citrus sinensis; type=EST; length=685bp
GGGGAAAATACACCAAACCAATTTCCATTTACATTTCATCTCATCTTCAA
TACCAACTGTAGCTTTTCTTTTAAATATGGCATCTCTGAATGAAGCATCA
ACTTTAGAACTCATCAGCCAGTATCTTCTCGCTGATCAGTACTTTACTTC
TTCAATTGATCATACCCATAGCTTCAAAAATATCTCAAACCTTCCTCAAA
GCCCGAGCTTATTCAACAACCCAACAACAACTACAACAGCAACAACAGTT
ACTACTACAACTGATCGTGATAATATAAACAGCAGAAACAAGCCTTCAAG
CACTTTAAAACAACGGAAGCCGGCCTGTGTAAAAAACGTAACCATACCCC
AAACTACAAGCTTCAATTTGATGAGCTGCTCCAATGTTAATGATGATGCT
GATAACCCAGTTGCTGTGAAAAATAAAGATCCAGATGCTGCTGCTGATAA
TAATACTAATAATAATAATAAAAATAATGAGGAAAAGCATTACAGAGGAG
TAAGGAGACGGCCGTGGGGCAGGTATGCAGCTGAAATCCGGGACCCGAAT
AGAAAAGGGAGCCGGGTTTGGCTTGGGACTTTTGAAACTGCCGTGGAAGC
CGCCAAAGCTTATGACAACGCTGCGTTTAGGCTGCGTGGAAGCAAAGCGA
TATTGAATTTCCCTCTCGAAGTTGGCGGGACTTTG
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