CK934457

Overview
NameCK934457
Unique NameCK934457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934457_ssr457 microsatellite CK934457_ssr457:457..471. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DRE2G_ARATH (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DREB2G PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13
Identity = 36/56 (64.29%), Postives = 46/56 (82.14%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILN 658
            +RGVR+R WG++ AEIR+PNR G+R+WLGTF T+VEAA AYD AA +L G +A LN
Sbjct:   34 FRGVRQRTWGKWVAEIREPNR-GTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAKLN 88          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF88_ARATH (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF088 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            +E  Y GVRRRPWGRYAAEIR+P  K  R WLGTF+TA EAA AYD AA  + GS A  NF
Sbjct:   17 QEGKYLGVRRRPWGRYAAEIRNPFTK-ERHWLGTFDTAEEAAFAYDVAARSISGSLATTNF 76          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            YRGVR R WG++ +EIR+P RK SR+WLGTF T   AA+A+D AA  ++G+ A+LNFP
Sbjct:   43 YRGVRMRTWGKWVSEIREP-RKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFP 99          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = 2
Query:  482 EKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            E+ ++G+R R WG++ AEIR+PN++ SR+WLG++ T   AA+AYD A F LRG  A LNFP
Sbjct:   18 ERPFKGIRMRKWGKWVAEIREPNKR-SRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP 77          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLEVG 676
            +RGVR+R WG++ AEIR+P + G+R+WLGTF TA +AA AYD AA  + GS A LNFP  VG
Sbjct:   78 FRGVRQRIWGKWVAEIREP-KIGTRLWLGTFPTAEKAASAYDEAATAMYGSLARLNFPQSVG 138          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            YRGVR R WG++ +EIR+P RK SR+WLGTF TA  A +A+D AA  ++G+ AILNFP
Sbjct:   19 YRGVRMRSWGKWVSEIREP-RKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFP 75          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            YRGVR R WG++ +EIR P RK +R+WLGTF TA  AA+A+D AA  ++GS A+LNFP
Sbjct:   79 YRGVRMRSWGKWVSEIRQP-RKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFP 135          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF21_ARATH (Ethylene-responsive transcription factor ERF021 OS=Arabidopsis thaliana GN=ERF021 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            YRGVR+R WG++ +EIR+P  K +R+WLG+FET   AA AYD AAF  RG +A LNFP
Sbjct:   24 YRGVRKRKWGKWVSEIREPGTK-NRIWLGSFETPEMAATAYDVAAFHFRGREARLNFP 80          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF10_ARATH (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana GN=ERF010 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13
Identity = 33/61 (54.10%), Postives = 46/61 (75.41%), Query Frame = 2
Query:  482 EKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            ++ Y+G+R R WG++ AEIR+PN++ SR+WLG++ T   AA+AYD A F LRG  A LNFP
Sbjct:   18 DRPYKGIRMRKWGKWVAEIREPNKR-SRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFP 77          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 2
Query:  479 EEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLEVGGT 682
            + K +RGVR+R WG + AEIR P  K  R+WLGTFETA EAA+AYD AA  + G  A  NFPL    T
Sbjct:    3 QTKKFRGVRQRHWGSWVAEIRHPLLK-RRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNT 69          
The following BLAST results are available for this feature:
BLAST of CK934457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
DRE2G_ARATH2.276e-1364.29Dehydration-responsive element-binding protein 2G ... [more]
ERF88_ARATH3.882e-1365.57Ethylene-responsive transcription factor ERF088 OS... [more]
ERF37_ARATH3.882e-1358.62Ethylene-responsive transcription factor ERF037 OS... [more]
ERF11_ARATH3.882e-1354.10Ethylene-responsive transcription factor ERF011 OS... [more]
DRE2B_ARATH3.882e-1359.68Dehydration-responsive element-binding protein 2B ... [more]
ERF43_ARATH5.070e-1360.34Ethylene-responsive transcription factor ERF043 OS... [more]
ERF36_ARATH5.070e-1360.34Ethylene-responsive transcription factor ERF036 OS... [more]
ERF21_ARATH5.070e-1360.34Ethylene-responsive transcription factor ERF021 OS... [more]
ERF10_ARATH5.070e-1354.10Ethylene-responsive transcription factor ERF010 OS... [more]
WIN1_ARATH6.622e-1355.88Ethylene-responsive transcription factor WIN1 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_G07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934457 ID=CK934457; Name=CK934457; organism=Citrus sinensis; type=EST; length=685bp
GGGGAAAATACACCAAACCAATTTCCATTTACATTTCATCTCATCTTCAA
TACCAACTGTAGCTTTTCTTTTAAATATGGCATCTCTGAATGAAGCATCA
ACTTTAGAACTCATCAGCCAGTATCTTCTCGCTGATCAGTACTTTACTTC
TTCAATTGATCATACCCATAGCTTCAAAAATATCTCAAACCTTCCTCAAA
GCCCGAGCTTATTCAACAACCCAACAACAACTACAACAGCAACAACAGTT
ACTACTACAACTGATCGTGATAATATAAACAGCAGAAACAAGCCTTCAAG
CACTTTAAAACAACGGAAGCCGGCCTGTGTAAAAAACGTAACCATACCCC
AAACTACAAGCTTCAATTTGATGAGCTGCTCCAATGTTAATGATGATGCT
GATAACCCAGTTGCTGTGAAAAATAAAGATCCAGATGCTGCTGCTGATAA
TAATACTAATAATAATAATAAAAATAATGAGGAAAAGCATTACAGAGGAG
TAAGGAGACGGCCGTGGGGCAGGTATGCAGCTGAAATCCGGGACCCGAAT
AGAAAAGGGAGCCGGGTTTGGCTTGGGACTTTTGAAACTGCCGTGGAAGC
CGCCAAAGCTTATGACAACGCTGCGTTTAGGCTGCGTGGAAGCAAAGCGA
TATTGAATTTCCCTCTCGAAGTTGGCGGGACTTTG
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