CK934457

Overview
NameCK934457
Unique NameCK934457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934457_ssr457 microsatellite CK934457_ssr457:457..471. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 2
Query:  380 SNVNDDADNPVAVXXXXXXXXXXXXXXXXXXXXEEKHYRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLEVGGTL 685
            SNV+DD  NP +                         YRGVR R WG++ +EIR+P RK SR+WLGT+ TA  AA+A+D AA  ++G+   LNFP E+ G L
Sbjct:   59 SNVSDDNKNPTS-------------------------YRGVRMRSWGKWVSEIREP-RKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFP-ELSGLL 133          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 2
Query:  482 EKH--YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFPLEVG 676
            +KH  YRGVR R WG++ +EIR+P RK SR+WLGT+ TA  AA+A+D AA  ++G+ A LNFP   G
Sbjct:   95 DKHPTYRGVRMRSWGKWVSEIREP-RKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAG 160          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            YRG+RRR WG++ +EIR+P +K +R+WLG++ETA  AA AYD AA  LRG    LNFP
Sbjct:   20 YRGIRRRKWGKWVSEIREPGKK-TRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFP 76          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            YRGVR+R WG++ +EIR+P RK SR+WLGTF +   AA+A+D AA  ++G+ AILNFP
Sbjct:   36 YRGVRKRNWGKWVSEIREP-RKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFP 92          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            YRGVR R WG++ +EIR+P RK SR+WLGTF T   AA+A+D AA  ++G+ AILNFP
Sbjct:   51 YRGVRMRNWGKWVSEIREP-RKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFP 107          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DRE2F_ARATH (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana GN=DREB2F PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNFP 664
            YRGVR+R WG++ AEIR+P +K +R+WLG+F TA EAA AYD AA +L G  A LN P
Sbjct:   28 YRGVRQRTWGKWVAEIREP-KKRARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNLP 84          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ERF84_ARATH (Ethylene-responsive transcription factor ERF084 OS=Arabidopsis thaliana GN=ERF084 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            + GVR+RPWGR++AEIRD   +  R WLGTF+TA EAA+AYD AA RLRG+KA  NF
Sbjct:  116 FMGVRKRPWGRWSAEIRDRIGR-CRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNF 171          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DRE2A_ORYSJ (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica GN=DREB2A PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            YRGVR+R WG++ AEIR+PNR G R+WLG+F TA+EAA AYD AA  + G  A +NF
Sbjct:   76 YRGVRQRTWGKWVAEIREPNR-GRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNF 131          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: DRE2A_ORYSI (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica GN=DREB2A PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 35/57 (61.40%), Postives = 44/57 (77.19%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILNF 661
            YRGVR+R WG++ AEIR+PNR G R+WLG+F TA+EAA AYD AA  + G  A +NF
Sbjct:   76 YRGVRQRTWGKWVAEIREPNR-GRRLWLGSFPTALEAAHAYDEAARAMYGPTARVNF 131          
BLAST of CK934457 vs. ExPASy Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.927e-12
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 2
Query:  491 YRGVRRRPWGRYAAEIRDPNRKGSRVWLGTFETAVEAAKAYDNAAFRLRGSKAILN 658
            YRGVR+R WG++ AEIR+P RK +R WLGTF TA +AA+AYD AA  L GS+A LN
Sbjct:   55 YRGVRQRSWGKWVAEIREP-RKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLN 109          
The following BLAST results are available for this feature:
BLAST of CK934457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
ERF35_ARATH6.622e-1342.16Ethylene-responsive transcription factor ERF035 OS... [more]
ERF34_ARATH6.622e-1355.22Ethylene-responsive transcription factor ERF034 OS... [more]
ERF22_ARATH6.622e-1358.62Ethylene-responsive transcription factor ERF022 OS... [more]
TINY_ARATH8.648e-1358.62Ethylene-responsive transcription factor TINY OS=A... [more]
DREB3_ARATH8.648e-1360.34Dehydration-responsive element-binding protein 3 O... [more]
DRE2F_ARATH1.129e-1260.34Dehydration-responsive element-binding protein 2F ... [more]
ERF84_ARATH1.475e-1264.91Ethylene-responsive transcription factor ERF084 OS... [more]
DRE2A_ORYSJ1.475e-1261.40Dehydration-responsive element-binding protein 2A ... [more]
DRE2A_ORYSI1.475e-1261.40Dehydration-responsive element-binding protein 2A ... [more]
ABI4_ARATH1.927e-1264.29Ethylene-responsive transcription factor ABI4 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_G07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934457 ID=CK934457; Name=CK934457; organism=Citrus sinensis; type=EST; length=685bp
GGGGAAAATACACCAAACCAATTTCCATTTACATTTCATCTCATCTTCAA
TACCAACTGTAGCTTTTCTTTTAAATATGGCATCTCTGAATGAAGCATCA
ACTTTAGAACTCATCAGCCAGTATCTTCTCGCTGATCAGTACTTTACTTC
TTCAATTGATCATACCCATAGCTTCAAAAATATCTCAAACCTTCCTCAAA
GCCCGAGCTTATTCAACAACCCAACAACAACTACAACAGCAACAACAGTT
ACTACTACAACTGATCGTGATAATATAAACAGCAGAAACAAGCCTTCAAG
CACTTTAAAACAACGGAAGCCGGCCTGTGTAAAAAACGTAACCATACCCC
AAACTACAAGCTTCAATTTGATGAGCTGCTCCAATGTTAATGATGATGCT
GATAACCCAGTTGCTGTGAAAAATAAAGATCCAGATGCTGCTGCTGATAA
TAATACTAATAATAATAATAAAAATAATGAGGAAAAGCATTACAGAGGAG
TAAGGAGACGGCCGTGGGGCAGGTATGCAGCTGAAATCCGGGACCCGAAT
AGAAAAGGGAGCCGGGTTTGGCTTGGGACTTTTGAAACTGCCGTGGAAGC
CGCCAAAGCTTATGACAACGCTGCGTTTAGGCTGCGTGGAAGCAAAGCGA
TATTGAATTTCCCTCTCGAAGTTGGCGGGACTTTG
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