CK934463

Overview
NameCK934463
Unique NameCK934463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_SULSY (5'-nucleotidase surE OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=surE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.080e-27
Identity = 81/199 (40.70%), Postives = 111/199 (55.78%), Query Frame = 1
Query:   97 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQGTSIFK 687
            K  + +TNDDG  + GL+++   L+  N + V   APD   S  SHS+T+  P+     + D    Y V GTPADC  LG++  L    PDL+ISGIN G N G  V YSGTV  ARE     +PSV+ S   VG   N N +   ++  + I+ A+L  I+N   P+  FLN+++PT IP    KG+ LTKQG   +K
Sbjct:    2 KKIVFLTNDDGYQSKGLQAIRNRLIEEN-FRVITVAPDRNMSGTSHSLTFTRPLKIEKIEEDFY--YIVDGTPADCVHLGLNVILQNQKPDLLISGINTGPNIGNDVFYSGTVGAAREGTLFCIPSVAFS---VGSSKNPN-FEDVSKVAVKIVKALL--IKN--LPKGTFLNVNIPT-IPAEKIKGFLLTKQGRGAYK 188          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_DEIGD (5'-nucleotidase surE OS=Deinococcus geothermalis (strain DSM 11300) GN=surE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.842e-27
Identity = 80/198 (40.40%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   88 SDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISAR---PADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQG 672
            S  +P I+V NDDGI +PG+++L   L       V V APD  +SAV H IT R P+  +    A F  + AY V GTPADC  LGV        PDLV+SGIN+GSN G  + +SGTVA A E    G+PS++ S    GG      +T  A     +  A+LA    +  P R  LN++ P  +P  +G ++TK G
Sbjct:    6 SPDRPRILVANDDGIFSPGIKALALALADVG--DVVVVAPDVEQSAVGHGITIRRPLRFKHTASAGFGTLPAYRVDGTPADCVVLGVHLL---GRPDLVVSGINLGSNLGDDLTHSGTVAAAIEGLALGLPSIAFSQQGNGG--GEYSFTAGAAYAARLARAVLA----KGLPPRVLLNVNFPAGLP--RGVRITKVG 190          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_PELCD (5'-nucleotidase surE OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=surE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27
Identity = 76/192 (39.58%), Postives = 110/192 (57.29%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISA---RPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQG 672
            I+VTNDDG+ APG+ +L   L    +  V V APD  +SA+ H++T   P+ A   RP  F      AV GTP DC +LG+   L  SVPDLV++GIN G+N G  + YSGTV  A EA   GVP++++S +  G     ++Y  AA+A L     +  ++  +  P   FLN+++P      +G +LT+QG
Sbjct:    3 ILVTNDDGVHAPGIAALADSLHGLGQ--VVVVAPDRDRSAIGHALTLHAPLRADELRPGVF------AVDGTPTDCVNLGI-HGLLSSVPDLVVAGINRGANLGDDITYSGTVCAAMEATLMGVPALAVSLE--GDTFASSEYRQAADAAL----FLAQKVSEEGLPSDTFLNVNVPAG--RIRGIRLTRQG 177          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_DESVV (5'-nucleotidase surE OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=surE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27
Identity = 76/208 (36.54%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGG 726
            I +TNDDGI APGLR++ + L+    +TV V AP + +SAV H++T   P+  +    +G   + V GTP DC  LG+S +L    P+LV+SGIN G+N G  ++YSGTV+ A EA   G  +V++SYD      +++ +   A A LP        I     PERC +NI+ P   + + KG ++  Q  +++   W    ++ +GG
Sbjct:    3 IALTNDDGIQAPGLRAIYKALIEAG-HTVDVVAPVTEQSAVGHAVTIAMPLRVKVFHENGFRGHGVYGTPTDCMKLGLS-SLLEHKPELVVSGINAGANVGPDILYSGTVSAATEAAHMGYRAVALSYDSF-RPEDISAHARHAAALLP-------HIEWAGLPERCVVNINYPAVPVESIKGVRVCPQTRAVWH-DWYEHRTDPRGG 199          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_DESVH (5'-nucleotidase surE OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=surE PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.358e-27
Identity = 76/208 (36.54%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGG 726
            I +TNDDGI APGLR++ + L+    +TV V AP + +SAV H++T   P+  +    +G   + V GTP DC  LG+S +L    P+LV+SGIN G+N G  ++YSGTV+ A EA   G  +V++SYD      +++ +   A A LP        I     PERC +NI+ P   + + KG ++  Q  +++   W    ++ +GG
Sbjct:    3 IALTNDDGIQAPGLRAIYKALIEAG-HTVDVVAPVTEQSAVGHAVTIAMPLRVKVFHENGFRGHGVYGTPTDCMKLGLS-SLLEHKPELVVSGINAGANVGPDILYSGTVSAATEAAHMGYRAVALSYDSF-RPEDISAHARHAAALLP-------HIEWAGLPERCVVNINYPAVPVESIKGVRVCPQTRAVWH-DWYEHRTDPRGG 199          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_DESVM (5'-nucleotidase surE OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=surE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.998e-27
Identity = 74/208 (35.58%), Postives = 115/208 (55.29%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGG 726
            + +TNDDGI APGLR++ + L+    + V V AP + +SAV H++T   P+  +    +G     V GTP DC  LG+S  L    PD+V+SGIN G+N G  ++YSGTV+ A EA   G P++++SYD      +     L+ +A       +LA +  Q  P RC +N++ P   +P  KG +   Q  +++K  W    ++ +GG
Sbjct:    3 VALTNDDGIQAPGLRAMYKALLDAG-HEVHVVAPVTEQSAVGHAVTISLPLRVKEFHENGFRGRGVYGTPTDCVKLGLS-CLLDKKPDVVVSGINAGANVGPDILYSGTVSAATEAAHMGYPALAVSYD------SFRPADLSGQAAHAA--GLLATLDWQALPARCVVNLNYPAVPMPEVKGVRACPQTRAVWK-DWYDHRTDPRGG 199          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_DESOH (5'-nucleotidase surE OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=surE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.194e-26
Identity = 77/183 (42.08%), Postives = 104/183 (56.83%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFD-GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLA-AEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK 648
            I++TNDDGIDA GL +L RV    +R  V V AP++ +SAV H I+   P+     +   G   YAVSGTPADC  LG+   L P  PDLVISGIN G N G ++ YSGTVA AREA  +GVPS+++S D          Y  A  +    +   ++  +     P   FLN+++P D+P  +
Sbjct:    3 IVLTNDDGIDAEGLLALYRVFSRDHR--VVVVAPEAERSAVGHGISLHQPLRVNQRNHPAGGEWYAVSGTPADCVKLGILALLDPR-PDLVISGINAGLNHGAYMHYSGTVAAAREACVYGVPSIAVSMD---------GYPPAYFDEGASLTQTLVERLAEMEMPANTFLNVNMP-DLPRER 172          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_CLOB8 (5'-nucleotidase surE OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=surE PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.559e-26
Identity = 75/209 (35.89%), Postives = 120/209 (57.42%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVT--AYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPT-DIPNNKGYKLTKQGTSIFKMGWRRVTSEMQG 723
            I++TNDDGI+APG+ +L + +  +  + V + AP   KSA SHSI+   PI  +    +G+   AY+VSGTPADC  +G+S        +LVISGIN G N G  ++YSGTV+ A E   +G+PS+++S D   GK +  DY+ A +  + +++      + +       LN+++P  +  + KG K+ K G S +K  +  + S  +G
Sbjct:    3 ILITNDDGINAPGIIALAKEI--SKEHKVTIVAPKDQKSASSHSISIHSPIKIKEEFIEGLDCKAYSVSGTPADCTQVGLS--FLKENIELVISGINKGPNVGTDILYSGTVSAAIEGTIYGIPSIAVSMDVEYGKDD-EDYSKAVKWAIKVLDI----AKEEYLKSDVVLNLNIPNFNERDIKGIKVCKIGRSTYKTEYILLESNEEG 202          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_THEEB (5'-nucleotidase surE OS=Thermosynechococcus elongatus (strain BP-1) GN=surE PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.036e-26
Identity = 73/194 (37.63%), Postives = 106/194 (54.64%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPAD---FDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK--GYKLTKQG 672
            +++ NDDG+ APG+R+L   L       V VC PD  +SA  HS+T   PI A          + A+A SGTP+DC  L +  AL    PD V+SGIN GSN G  ++YSGTV+ A E    G+PS++IS         V+D+  AA+      N +L  + N   P +  LN+++P  +P ++  G  +T+QG
Sbjct:    3 LLIANDDGVFAPGIRTLADTLAIAGHEVVVVC-PDRERSATGHSLTVFDPIRAEVVSDRFHPRIKAWACSGTPSDCVKLALG-ALLEQPPDFVVSGINQGSNLGTDILYSGTVSAAMEGVIEGIPSIAISL----ASFTVHDFQPAAD----FTNRLLKALENAPLPPKVLLNVNVPA-LPASEIAGVVITRQG 185          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_BREBN (5'-nucleotidase surE OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=surE PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.659e-26
Identity = 73/178 (41.01%), Postives = 95/178 (53.37%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDG--VTAYAVSGTPADCASLGVSQALFP--SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP 627
            I+VTNDDGIDA G++ LV  L++     V + AP   KS V H IT+R  +S    DF G  V A+AV+G PADC        LF     PD+V SGIN+G+N G  + YSGT +GAREA   GVP V++SYD    + N  D     E   P++                F NI++P
Sbjct:    3 ILVTNDDGIDALGIKRLVEALLTLEGAEVSIVAPVEEKSGVGHGITYRSALSPEQRDFYGMPVKAWAVNGNPADCVKAAY-HLLFEHGKKPDIVFSGINVGTNLGRDIYYSGTCSGAREAVILGVPGVALSYDNWFDQDNYGD---VVEMIRPLVKEFSDRAIKGELASEVFWNINIP 176          
The following BLAST results are available for this feature:
BLAST of CK934463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_SULSY1.080e-2740.705'-nucleotidase surE OS=Sulfurihydrogenibium sp. (... [more]
SURE_DEIGD1.842e-2740.405'-nucleotidase surE OS=Deinococcus geothermalis (... [more]
SURE_PELCD5.358e-2739.585'-nucleotidase surE OS=Pelobacter carbinolicus (s... [more]
SURE_DESVV5.358e-2736.545'-nucleotidase surE OS=Desulfovibrio vulgaris sub... [more]
SURE_DESVH5.358e-2736.545'-nucleotidase surE OS=Desulfovibrio vulgaris (st... [more]
SURE_DESVM6.998e-2735.585'-nucleotidase surE OS=Desulfovibrio vulgaris (st... [more]
SURE_DESOH1.194e-2642.085'-nucleotidase surE OS=Desulfococcus oleovorans (... [more]
SURE_CLOB81.559e-2635.895'-nucleotidase surE OS=Clostridium beijerinckii (... [more]
SURE_THEEB2.036e-2637.635'-nucleotidase surE OS=Thermosynechococcus elonga... [more]
SURE_BREBN2.659e-2641.015'-nucleotidase surE OS=Brevibacillus brevis (stra... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004258_H01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934463 ID=CK934463; Name=CK934463; organism=Citrus sinensis; type=EST; length=736bp
GGGGAATTCTTCTTCTTCTTCTTCTTGGACCGAACAATCCTGTAGCCGGA
GGAAGAAATGGAGCGTCGTGGAATCGCTATTGTTAACTCCGATCACAAGC
CAACGATTATGGTCACCAACGACGACGGGATCGACGCGCCTGGTTTGCGT
TCCCTCGTCCGCGTTCTCGTCTCCACCAATCGCTACACCGTCCAAGTCTG
CGCCCCCGATTCAGGAAAATCGGCTGTTAGTCATAGTATTACTTGGCGTC
ACCCAATTTCGGCCAGACCAGCAGATTTTGATGGAGTTACAGCCTATGCC
GTGTCTGGAACTCCAGCAGATTGTGCATCGTTGGGTGTCTCGCAAGCACT
CTTTCCTTCGGTCCCTGACCTGGTAATCAGTGGCATAAACATGGGTAGCA
ACTGTGGTTATCATGTTGTTTACTCTGGGACAGTTGCAGGTGCTCGAGAG
GCTTTCTTTCATGGTGTACCGTCTGTCTCTATATCATACGACTGGGTTGG
AGGTAAGAGCAATGTTAATGATTACACACTCGCTGCTGAGGCTTGTTTAC
CTATTATAAATGCAATACTGGCCGAGATCAGGAATCAAACTTATCCTGAA
AGATGCTTTCTAAACATAGATCTACCTACAGATATTCCTAATAATAAGGG
GTATAAACTTACTAAGCAGGGTACGAGCATATTCAAAATGGGGTGGAGAC
GAGTCACTTCTGAGATGCAAGGAGGGAAGATGTTAT
back to top