CK934463

Overview
NameCK934463
Unique NameCK934463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_ROSDO (5'-nucleotidase surE OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=surE PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.107e-23
Identity = 66/195 (33.85%), Postives = 107/195 (54.87%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSL--VRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNV--NDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK--GYKLTKQG 672
            I++TNDDGI+APGL  L  +   ++     V   AP   +S V H I++  P+        G   +A  G+PADC   G+   +  S PDLV+SG+N G+N   + +YSGT+ GA EA   G+P++++S  + G ++N   N +  +A+  + ++  ILA    +T   R F N++ P  +P ++  G +L  QG
Sbjct:    3 ILITNDDGINAPGLMVLHEIATRLAGQDGEVWTVAPAFEQSGVGHCISYTRPMMVAQM---GPRRFAAEGSPADCVLAGLHDVMKDSPPDLVLSGVNRGNNSAENTLYSGTIGGAMEAALQGLPAIALS-QYYGPRNNAIENPFEASAQHGVDVVQRILAHTPQETGGYRLFYNVNFP-PVPGDEVLGIRLATQG 192          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_PETMO (5'-nucleotidase surE OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=surE PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.107e-23
Identity = 77/193 (39.90%), Postives = 114/193 (59.07%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADF-DGVTAYAVSGTPADCASLGVSQALFPSVP-DLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS-YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQ 669
            I+++NDDGI +PG+ +L   L    ++ V V APD  +SA  H IT R+P+ A+   F D    +AV+GTPADC  +G+  A++  +  D+VISGIN G+N G  V+YSGTV+ A E    G PS+++S  D+    SN N      E    ++  IL ++    +PE   LN+++P  IP +  KG K+TKQ
Sbjct:    3 ILLSNDDGIMSPGIITLKTYL--QQKHDVYVVAPDIERSATGHGITVRNPLWAKKVKFGDTFFGHAVNGTPADCVKIGLD-AIYKDIHFDVVISGINRGANLGTDVLYSGTVSAALEGAVGGYPSIAVSCVDF----SNPN-----FEDGAKVVLNILEKLDLNNWPEFTTLNVNIP-KIPYDEMKGIKITKQ 182          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_DESRM (5'-nucleotidase surE OS=Desulfotomaculum reducens (strain MI-1) GN=surE PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.107e-23
Identity = 71/191 (37.17%), Postives = 108/191 (56.54%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTA--YAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQG 672
            I+++NDDGI A G+  L R  + T    V V APD  +SA  H IT   P+ A+   F    A  + + GTPADC  LG+ ++L  + PDLV+SGIN+G N G  V+YSGTV+ A EA  + VP++++S   +     +N Y +AA+     +   +  ++     E   LNI++P +  N +G K+T+ G
Sbjct:    3 ILISNDDGIYADGIGQL-RKAMETIASEVYVVAPDRERSACGHGITVTRPLRAKVHPFKSGHAKGWVIDGTPADCVKLGL-ESLLENPPDLVVSGINLGPNLGTDVLYSGTVSAAYEAIINHVPAIAVS---LAAWEELN-YQVAAD----FMKDFIPMLKEHPMGEGMLLNINIPNNY-NGRGIKVTRLG 182          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_DESAD (5'-nucleotidase surE OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=surE PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.107e-23
Identity = 57/129 (44.19%), Postives = 81/129 (62.79%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 492
            I++TNDDGI A GLR+L   L       VQV AP + +SAV H+++   P+  +  + DG T   V GTP DC  LG++  L  + PD+V+SGIN G+N G  ++YSGTV+ A E    G P++++SYD
Sbjct:    3 ILLTNDDGIQAVGLRALYHGLKRAGM-NVQVVAPVAEQSAVGHAVSLSSPLRVKKFEEDGFTGLGVYGTPVDCVKLGLT-TLLETKPDIVVSGINSGANVGVDILYSGTVSAATEGALMGYPAMAVSYD 129          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_DEIRA (5'-nucleotidase surE OS=Deinococcus radiodurans GN=surE PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 73/195 (37.44%), Postives = 103/195 (52.82%), Query Frame = 1
Query:   97 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISAR---PADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQG 672
            +P ++V NDDGI APG+++L   L  +    V V APD  +SAV H IT R P+  +    A F  + AY V GTPADC  LGV        PDLV+SGIN+G N G  + +SGTVA A E    G+PS++ S       +   +Y     A     + +  E+  +  P R  LN++ P   P  +G ++T+ G
Sbjct:   16 RPRVLVANDDGIFAPGIKALGLAL--SEWADVVVVAPDVEQSAVGHGITIRRPLRFKHTAAAGFGDIPAYRVDGTPADCVVLGVHLL---GRPDLVVSGINIGPNLGEDLTHSGTVAAAIEGLTLGLPSIAFSQ----FANEAGEYDFGPSAA--YASRLAREVCCRGLPPRVLLNVNFPRVSP--RGVRVTEVG 197          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_BRASB (5'-nucleotidase surE OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=surE PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 69/207 (33.33%), Postives = 106/207 (51.21%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQGTSIFKMGWRRVTSEMQG 723
            I+ TNDDGI APGL+ +  +  + +   V + AP+  +S VSHS++   P+  R     G   +AV GTP DC  +G    L   +PDLV+SG+N G N    VVYSGT+AGA E    G+PS ++S ++     +   +  A +    I+  +L        P    +N++ P   P+  KG  +T+QG     +G+ +V     G
Sbjct:    3 ILCTNDDGIHAPGLKVIEEIARALSD-DVWIVAPELDQSGVSHSLSLNDPLRLREV---GPRHFAVRGTPTDCVIMGARHILGAKLPDLVLSGVNKGRNVAEDVVYSGTIAGALEGTILGLPSFALSQEFSIATRDKPSWDTALKFGPQIVRKVL----EAGVPRNTVINVNFPACAPDEVKGLVVTRQGKR--NLGFLKVDERRDG 199          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_BEII9 (5'-nucleotidase surE OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=surE PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 61/140 (43.57%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDW---VGGKSNV 516
            I++TNDDGI+APGL  L R+  S     V V AP+S +S V+HS++   P+  R         +AV GTP DC  +GV   L    PDLV+SG+N G N    V+YSGTVAGA E    G+PS+++S  +    GG+S +
Sbjct:    3 ILITNDDGINAPGLAVLERI-ASALSDDVFVVAPESDQSGVAHSLSLSDPLRLRKISD---RRFAVKGTPTDCVIMGVRSILIEQKPDLVLSGVNCGQNLAEDVIYSGTVAGAMEGTILGIPSIALSQCYEAGTGGRSGI 138          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_TOLAT (5'-nucleotidase surE OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=surE PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 75/191 (39.27%), Postives = 107/191 (56.02%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIP--NNKGYKLTKQG 672
            I+V+NDDG++A GL  L   L S     V V APD  +S  S+S+T  +PI  R    +    Y+V GTP DC    V++ L P  PD+V+SGIN G+N G  V+YSGTVA A E    G+P+V++S   VG     +  + A  ACL     +++ +R    P    LN+++P D+P    KG K+T+ G
Sbjct:    3 ILVSNDDGVNAQGLHCLSEALCSLGE--VIVVAPDRNRSGASNSLTLENPI--RVETLETGKRYSVKGTPTDCVHFAVNKLLDPW-PDIVVSGINHGANLGDDVIYSGTVAAATEGRHMGLPAVAVSL--VG---ETHFASAAHYACL-----LVSRLRTHPLPSDQILNVNVP-DLPLEQIKGIKVTRLG 177          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_RHOBA (5'-nucleotidase surE OS=Rhodopirellula baltica GN=surE PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 70/176 (39.77%), Postives = 98/176 (55.68%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVT-AYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPT 630
            I++TNDDG+ APGL +L + L       V   AP + +S V HSIT+  P+  +    DGV  A+AV G+PADC  L +++       DLV+SGIN G N G +V+YSGTVA A E  F GV SV++S +     S+ ND+  AA     I   ++ EI           N+++PT
Sbjct:    3 ILLTNDDGVHAPGLAALRQQLRHLGE--VITVAPATEQSGVGHSITYLTPLVPKSIHRDGVHWAWAVEGSPADCVKLSLAELFVDEPIDLVVSGINNGLNAGINVLYSGTVAAAIEGAFFGVTSVAVSLE----NSDDNDFDAAA----VIARNVIGEIVRHEESRGGLFNLNVPT 168          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_BRASO (5'-nucleotidase surE OS=Bradyrhizobium sp. (strain ORS278) GN=surE PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 69/207 (33.33%), Postives = 108/207 (52.17%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQGTSIFKMGWRRVTSEMQG 723
            I+ TNDDGI APGL+ +  +  + +   V + AP+  +S VSHS++   P+  R     G   +AV GTP DC  +G    L    PDLV+SG+N G N    VVYSGT+AGA E    G+PS ++S ++     +   +  A +    I+  +L    +   P+   +N++ P+  P+  KG  +T+QG     +G+ +V     G
Sbjct:    3 ILCTNDDGIHAPGLKVIEEIARALSD-DVWIVAPELDQSGVSHSLSLNDPLRLREV---GPRHFAVRGTPTDCVIMGARHILGEKRPDLVLSGVNKGRNVAEDVVYSGTIAGALEGTILGLPSFALSQEFSIATRDKPSWDTALKFGPQIVRKVL----DAGVPKNTVINVNFPSCAPDQVKGIVVTRQGKR--NLGFLKVDERRDG 199          
The following BLAST results are available for this feature:
BLAST of CK934463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_ROSDO2.107e-2333.855'-nucleotidase surE OS=Roseobacter denitrificans ... [more]
SURE_PETMO2.107e-2339.905'-nucleotidase surE OS=Petrotoga mobilis (strain ... [more]
SURE_DESRM2.107e-2337.175'-nucleotidase surE OS=Desulfotomaculum reducens ... [more]
SURE_DESAD2.107e-2344.195'-nucleotidase surE OS=Desulfovibrio salexigens (... [more]
SURE_DEIRA3.594e-2337.445'-nucleotidase surE OS=Deinococcus radiodurans GN... [more]
SURE_BRASB3.594e-2333.335'-nucleotidase surE OS=Bradyrhizobium sp. (strain... [more]
SURE_BEII93.594e-2343.575'-nucleotidase surE OS=Beijerinckia indica subsp.... [more]
SURE_TOLAT4.694e-2339.275'-nucleotidase surE OS=Tolumonas auensis (strain ... [more]
SURE_RHOBA4.694e-2339.775'-nucleotidase surE OS=Rhodopirellula baltica GN=... [more]
SURE_BRASO4.694e-2333.335'-nucleotidase surE OS=Bradyrhizobium sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_H01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934463 ID=CK934463; Name=CK934463; organism=Citrus sinensis; type=EST; length=736bp
GGGGAATTCTTCTTCTTCTTCTTCTTGGACCGAACAATCCTGTAGCCGGA
GGAAGAAATGGAGCGTCGTGGAATCGCTATTGTTAACTCCGATCACAAGC
CAACGATTATGGTCACCAACGACGACGGGATCGACGCGCCTGGTTTGCGT
TCCCTCGTCCGCGTTCTCGTCTCCACCAATCGCTACACCGTCCAAGTCTG
CGCCCCCGATTCAGGAAAATCGGCTGTTAGTCATAGTATTACTTGGCGTC
ACCCAATTTCGGCCAGACCAGCAGATTTTGATGGAGTTACAGCCTATGCC
GTGTCTGGAACTCCAGCAGATTGTGCATCGTTGGGTGTCTCGCAAGCACT
CTTTCCTTCGGTCCCTGACCTGGTAATCAGTGGCATAAACATGGGTAGCA
ACTGTGGTTATCATGTTGTTTACTCTGGGACAGTTGCAGGTGCTCGAGAG
GCTTTCTTTCATGGTGTACCGTCTGTCTCTATATCATACGACTGGGTTGG
AGGTAAGAGCAATGTTAATGATTACACACTCGCTGCTGAGGCTTGTTTAC
CTATTATAAATGCAATACTGGCCGAGATCAGGAATCAAACTTATCCTGAA
AGATGCTTTCTAAACATAGATCTACCTACAGATATTCCTAATAATAAGGG
GTATAAACTTACTAAGCAGGGTACGAGCATATTCAAAATGGGGTGGAGAC
GAGTCACTTCTGAGATGCAAGGAGGGAAGATGTTAT
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