CK934463

Overview
NameCK934463
Unique NameCK934463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_CAUCR (5'-nucleotidase surE OS=Caulobacter crescentus GN=surE PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23
Identity = 68/190 (35.79%), Postives = 101/190 (53.16%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 672
            I++TNDDGI APGL++L ++  + +   V +CAP+  +S  S ++T   PI  R  D      +AV GTP DC  + V   +    PDLV+SG+N G N    V  SGTVAGA E    G+PS+++S         +  +   AEA  P I   L E+    +P    +N++ P   P + K  ++T+QG
Sbjct:    3 ILLTNDDGIHAPGLQALEKIARALSD-DVWICAPEYEQSGASRALTLADPIRVRKLDS---RRFAVEGTPTDCVMMAVQHLIEGGRPDLVLSGVNRGQNIAEDVTLSGTVAGAIEGMAMGIPSIALSQSMNYFHDEIVAHWETAEAFAPGIIQRLLEV---GWPADVVMNVNFPALPPESVKAVEVTRQG 185          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_CAUCN (5'-nucleotidase surE OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=surE PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23
Identity = 68/190 (35.79%), Postives = 101/190 (53.16%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 672
            I++TNDDGI APGL++L ++  + +   V +CAP+  +S  S ++T   PI  R  D      +AV GTP DC  + V   +    PDLV+SG+N G N    V  SGTVAGA E    G+PS+++S         +  +   AEA  P I   L E+    +P    +N++ P   P + K  ++T+QG
Sbjct:    3 ILLTNDDGIHAPGLQALEKIARALSD-DVWICAPEYEQSGASRALTLADPIRVRKLDS---RRFAVEGTPTDCVMMAVQHLIEGGRPDLVLSGVNRGQNIAEDVTLSGTVAGAIEGMAMGIPSIALSQSMNYFHDEIVAHWETAEAFAPGIIQRLLEV---GWPADVVMNVNFPALPPESVKAVEVTRQG 185          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_XANAC (5'-nucleotidase surE OS=Xanthomonas axonopodis pv. citri GN=surE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.046e-22
Identity = 69/193 (35.75%), Postives = 107/193 (55.44%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP----TDIPNNKGYKLTKQG 672
            ++V+NDDG+DAPG++ L   L     + V V APD  +S  S+S+T   PI  R  D       AV+GTP DC  L ++  +    PD+V+SGIN  +N G  V+YSGTV+ A E  F G+P+V++S   V      ++Y  AA A + I+    A ++    P    LN+++P    +D+    G+++T+ G
Sbjct:    3 VLVSNDDGVDAPGIQVLAEALRHAG-HEVMVVAPDRDRSGASNSLTLDVPIRTRRID---AQTCAVAGTPTDCVHLALT-GMLDYDPDIVVSGINNSANLGDDVIYSGTVSAAMEGRFLGLPAVAVSL--VTHNHQAHNYDTAARAAVEIV----ARLKADPLPADTILNVNVPDLAWSDV---LGFEVTRLG 181          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_MAGSA (5'-nucleotidase surE OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=surE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.046e-22
Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS 486
            I+++NDDGI+APG++ L R+  + ++  V V AP++ +SA  HS+T R P+  R         YAV GTP D   LGV+  L    PDLV+SGIN G+N G  V YSGTVA A E    G+P++++S
Sbjct:   14 ILISNDDGINAPGIKVLERIARTLSK-DVWVVAPETEQSAAGHSLTIRRPLRVRKVS---ARRYAVDGTPTDSVLLGVNHVLKGKKPDLVLSGINRGANLGEDVTYSGTVAAAMEGTILGIPAIALS 136          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_GEMAT (5'-nucleotidase surE OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=surE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.046e-22
Identity = 78/200 (39.00%), Postives = 110/200 (55.00%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPI-INAILAEIRNQT----YPERCFLNIDLPTDIPNN--KGYKLTKQGTSIF 684
            I+++NDDGI A GL  L R   S     + V APD  +SA SHS+T  HP+  RP    G   + V GTP DC  L   +AL  + PD V+SGIN G N G  V+YSGTVA A E    G+P++++S+       NV    L A+A L   + AI + + + T    +P    LN++LP  +P +  +G +LT+ G  +F
Sbjct:    3 ILLSNDDGILAKGLGVLERAAESLGE--LHVVAPDREQSATSHSLTLHHPL--RPVRL-GERRWQVDGTPTDCVMLAC-EALLEARPDFVLSGINHGPNMGEDVLYSGTVAAAMEGLALGIPAIALSF-----AGNV----LRADALLDTQVGAIRSLLHHLTGLPAFPADTLLNVNLPA-VPGDEIRGIRLTRLGRRVF 186          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_XANC5 (5'-nucleotidase surE OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=surE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.366e-22
Identity = 69/193 (35.75%), Postives = 106/193 (54.92%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP----TDIPNNKGYKLTKQG 672
            ++V+NDDG+DAPG++ L   L     + V V APD  +S  S+S+T   PI  R  D       AV+GTP DC  L ++  +    PD+V+SGIN  +N G  V+YSGTV+ A E  F G+P+V++S   V      + Y  AA A + I+    A ++    P    LN+++P    +D+    G+++T+ G
Sbjct:    3 VLVSNDDGVDAPGIQILAEALRHAG-HEVMVVAPDRDRSGASNSLTLDVPIRTRRVD---AQTCAVAGTPTDCVHLALT-GMLDYDPDIVVSGINNSANLGDDVIYSGTVSAAMEGRFLGLPAVAVSL--VTHNHQAHHYDTAARAAVEIV----ARLKADPLPADTILNVNVPDLAWSDV---LGFEVTRLG 181          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_SYNY3 (5'-nucleotidase surE OS=Synechocystis sp. (strain PCC 6803) GN=surE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.366e-22
Identity = 68/194 (35.05%), Postives = 103/194 (53.09%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPAD--FDG-VTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNK--GYKLTKQG 672
            ++V+NDDGI + G+R+L   LV+       VC PD  +SA  H +T   PI A   +  FD  + A++ SGTPADC    +  A+ P  PD V+SG+N G+N G  V+YSGTV+ A E    G+PS+++S           D+  AA+      N  +  +      E    +I++P  +P  +  G +LT+QG
Sbjct:    9 LLVSNDDGIFSQGVRTLANTLVAAGHEVTVVC-PDRERSATGHGLTLHRPIRAGIVEDVFDPRIKAWSCSGTPADCVKFAL-HAVMPRYPDFVLSGVNHGANLGTDVLYSGTVSAAMEGLIEGIPSIALSL----VSFTATDFQPAAD----FANCFVQHLWRSPLTEPTLFSINIPA-VPAEQIAGVRLTRQG 191          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_RHOPS (5'-nucleotidase surE OS=Rhodopseudomonas palustris (strain BisB5) GN=surE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.366e-22
Identity = 74/207 (35.75%), Postives = 104/207 (50.24%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQGTSIFKMGWRRVTSEMQG 723
            I+ TNDDGI APGL+ +V  +       V V AP+  +S VSHS++   P+  R     G   +AV GTP DC  +G    L    PDLV+SG+N G N    VVYSGT+AGA E    G+PS ++S ++     N   +   A+A  P    IL +      P+   +NI+ P   P+   G  +T+QG      G+ R+     G
Sbjct:    3 ILCTNDDGIHAPGLK-VVEEIARALSDDVWVVAPELDQSGVSHSLSLNDPLRLREV---GPRHFAVRGTPTDCVIMGARHILADKAPDLVLSGVNRGRNVAEDVVYSGTIAGALEGTILGLPSFALSQEFTLETRNAPLWD-TAKAHGP---EILRKAIKAGVPKNTVININFPACAPDEVAGVMVTRQGKR--NQGFLRIDERHDG 199          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_PROM1 (5'-nucleotidase surE OS=Prochlorococcus marinus (strain NATL1A) GN=surE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.366e-22
Identity = 63/180 (35.00%), Postives = 95/180 (52.78%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADF---DGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSI---SYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLP 627
            I+++NDDG+ A G+R+L     S       VC PD  +SA  H +T   PI A  AD     G+ A+  +GTPADC  L +++ L    PDL++SGIN G N G  +  SGTVA A E    G+PS+++   S+ W        +++ A +  L I    +     Q +P+   LN+++P
Sbjct:    6 ILISNDDGVFAEGIRTLATSAASRGHKVTVVC-PDQERSATGHGLTLHSPIRAEKADELFGGGIKAWGCTGTPADCVKLALNE-LLDQKPDLILSGINHGPNLGTDIFCSGTVAAALEGTLDGIPSIAVSVASFQW-------KNFSFAGKLSLDIAEKAI----QQNWPKNLLLNLNIP 172          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_CHLAD (5'-nucleotidase surE OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=surE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.366e-22
Identity = 71/196 (36.22%), Postives = 101/196 (51.53%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADF-DGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQGTSIFK 687
            I+VTNDDG  +PGL +L  VL       V V APD   SA  H      P+ A      DG  A    GTPADC +L +   L    PDLV+SGIN+G+N G  ++YSGTVA A E    GVP +++S   +  K    D+  A  A    +  ++  IR +  P    LN+++P   P   +G K+++ G  +++
Sbjct:    3 ILVTNDDGYQSPGLAALRAVLSEIGE--VAVVAPDRNWSAAGHYRKLFDPLRAWEGTLSDGSPALICDGTPADCVALAIL-GLLDRKPDLVVSGINLGANLGTDLLYSGTVAAAMEGIVFGVPGLAVSQ--IRPKDGQWDFRAAQVA----VRRLVMLIRERGLPPELLLNLNIPAVTPETLRGIKVSRLGRRVYR 189          
The following BLAST results are available for this feature:
BLAST of CK934463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_CAUCR8.007e-2335.795'-nucleotidase surE OS=Caulobacter crescentus GN=... [more]
SURE_CAUCN8.007e-2335.795'-nucleotidase surE OS=Caulobacter crescentus (st... [more]
SURE_XANAC1.046e-2235.755'-nucleotidase surE OS=Xanthomonas axonopodis pv.... [more]
SURE_MAGSA1.046e-2244.885'-nucleotidase surE OS=Magnetospirillum magneticu... [more]
SURE_GEMAT1.046e-2239.005'-nucleotidase surE OS=Gemmatimonas aurantiaca (s... [more]
SURE_XANC51.366e-2235.755'-nucleotidase surE OS=Xanthomonas campestris pv.... [more]
SURE_SYNY31.366e-2235.055'-nucleotidase surE OS=Synechocystis sp. (strain ... [more]
SURE_RHOPS1.366e-2235.755'-nucleotidase surE OS=Rhodopseudomonas palustris... [more]
SURE_PROM11.366e-2235.005'-nucleotidase surE OS=Prochlorococcus marinus (s... [more]
SURE_CHLAD1.366e-2236.225'-nucleotidase surE OS=Chloroflexus aggregans (st... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_H01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934463 ID=CK934463; Name=CK934463; organism=Citrus sinensis; type=EST; length=736bp
GGGGAATTCTTCTTCTTCTTCTTCTTGGACCGAACAATCCTGTAGCCGGA
GGAAGAAATGGAGCGTCGTGGAATCGCTATTGTTAACTCCGATCACAAGC
CAACGATTATGGTCACCAACGACGACGGGATCGACGCGCCTGGTTTGCGT
TCCCTCGTCCGCGTTCTCGTCTCCACCAATCGCTACACCGTCCAAGTCTG
CGCCCCCGATTCAGGAAAATCGGCTGTTAGTCATAGTATTACTTGGCGTC
ACCCAATTTCGGCCAGACCAGCAGATTTTGATGGAGTTACAGCCTATGCC
GTGTCTGGAACTCCAGCAGATTGTGCATCGTTGGGTGTCTCGCAAGCACT
CTTTCCTTCGGTCCCTGACCTGGTAATCAGTGGCATAAACATGGGTAGCA
ACTGTGGTTATCATGTTGTTTACTCTGGGACAGTTGCAGGTGCTCGAGAG
GCTTTCTTTCATGGTGTACCGTCTGTCTCTATATCATACGACTGGGTTGG
AGGTAAGAGCAATGTTAATGATTACACACTCGCTGCTGAGGCTTGTTTAC
CTATTATAAATGCAATACTGGCCGAGATCAGGAATCAAACTTATCCTGAA
AGATGCTTTCTAAACATAGATCTACCTACAGATATTCCTAATAATAAGGG
GTATAAACTTACTAAGCAGGGTACGAGCATATTCAAAATGGGGTGGAGAC
GAGTCACTTCTGAGATGCAAGGAGGGAAGATGTTAT
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