CK934463

Overview
NameCK934463
Unique NameCK934463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934463_ssr7 microsatellite CK934463_ssr7:7..24. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12009 contig Csv1_Contig12009:81..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_CYAP4 (5'-nucleotidase surE OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=surE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.459e-24
Identity = 71/193 (36.79%), Postives = 104/193 (53.89%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPAD---FDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPT-DIPNNKGYKLTKQG 672
            ++++NDDGI +PG+R+L   L +     + VC PD  +SA  H +T   PI A          V A+A SGTP+DC  L +  AL  S+PD V+SGIN GSN G  ++YSGTV+ A E    G+PS+++S         V ++  AA         +LA++ +   PE   LNI++P        G  +T+QG
Sbjct:    3 LLLSNDDGIFSPGIRTLADTLAAAGHEVMVVC-PDRERSATGHGLTLFDPIRAEAVASLFHPSVKAWACSGTPSDCIKLALG-ALLDSLPDFVLSGINQGSNLGTDILYSGTVSAAMEGVIEGIPSMALSLT----SFTVREFQPAAN----FARDLLAKLDHTPLPEAMLLNINVPALPAAEIAGVAITRQG 185          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_ACAM1 (5'-nucleotidase surE OS=Acaryochloris marina (strain MBIC 11017) GN=surE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.459e-24
Identity = 78/194 (40.21%), Postives = 102/194 (52.58%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPAD---FDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 672
            I+V NDDGI APG+R+L   L   +  TV VC PD  +SA  H +T   PI A        D VTA+A SGTPADC  L +  AL  S PD V+SGIN G N G  V+YSGTV+ A E    G+ S++ SY      S+  D      A       +L  +      E   LN+++P  +P +  +G  LT+QG
Sbjct:    3 ILVGNDDGIFAPGVRALANTLAPDHEVTV-VC-PDRERSATGHGLTIHQPIRAEQVQSMFVDQVTAWACSGTPADCIKLALG-ALLDSPPDFVLSGINQGPNLGTDVLYSGTVSAAMEGVIEGITSIAFSY------SSFTDQQFQPAANFG--QQLLEHLIQHPLSEPMLLNVNVPA-VPADQIQGVALTRQG 184          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE1_THET2 (5'-nucleotidase surE 1 OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=surE1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.459e-24
Identity = 78/197 (39.59%), Postives = 105/197 (53.30%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPIS---ARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQGTSIFK 687
            I+V+NDDGI +PG+++L   + +     V V APD  +SAV H IT R P+     + A F  + AY V GTPADC  LGV        PDLV+SGIN+G N G  + +SGTVA A E    G+PS++ S D  G    V D+  AA   L I  A    +  +  P    LN++ P   P  KG  +T+  T  F+
Sbjct:    3 ILVSNDDGIFSPGIKALGLAMRALGE--VFVVAPDMEQSAVGHGITVRRPLRFKHTQSAGFGEIPAYRVDGTPADCVVLGVHLL---GRPDLVVSGINLGVNLGLDLTHSGTVAAALEGASLGIPSIAFSLDTSG---EVLDFQEAARWALAIARA----VGERGLPPGVLLNVNFPASRP--KGLLVTRLSTHRFE 185          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_SYNR3 (5'-nucleotidase surE OS=Synechococcus sp. (strain RCC307) GN=surE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.906e-24
Identity = 68/188 (36.17%), Postives = 105/188 (55.85%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPAD---FDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS---YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKG 651
            I+++NDDG+ A G+++L     +   ++V V  PD  +SA  H +T + PI A  AD    DG+ A+A +GTP+DC  L + + L  + PDLV+SGIN G N G  V+YSGTVA A E    G+P++++S   +DW         +  AA   + +  + LA      +PE   LN+++P   P+  G
Sbjct:    7 ILISNDDGVFAEGIKALAHE-AARRGHSVTVVCPDQERSATGHGLTLQSPIRAEQADGLFADGIRAWACTGTPSDCVKLALGK-LLEAPPDLVLSGINHGPNLGSDVIYSGTVAAAMEGTLEGLPALAVSSACFDW-------RQFDGAAVQAMDVAESALA----GGWPEGLLLNLNVPAVPPDRIG 181          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_CYAP7 (5'-nucleotidase surE OS=Cyanothece sp. (strain PCC 7424) GN=surE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.906e-24
Identity = 71/203 (34.98%), Postives = 109/203 (53.69%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPAD--FDG-VTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDL-PTDIPNNKGYKLTKQGTSIFKMGWRR 702
            ++++NDDGI A G+R+L   L         VC PD  +SA  H +T   PI A+  +  FD  VTA++ SGTP+DC    +S  LF   PD V+SGIN GSN G  ++YSGTV+ A E    G+ S+++S        +  D+  AA   + +I    A++     P+   LN+++ P    +  G KLT+QG   ++  + +
Sbjct:    9 LLISNDDGIFALGVRTLANTLAKAGHQVTVVC-PDRERSATGHGLTLHQPIRAQIVEGIFDPQVTAWSCSGTPSDCIKFALSAVLFTR-PDFVLSGINHGSNLGTDILYSGTVSAAMEGLIDGITSIALSLT----SFSSQDFQPAANFAVDLI----AKLARHPLPQPTLLNVNVPPVKSEDMAGVKLTRQGLRRYRENFEK 201          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_CLOBB (5'-nucleotidase surE OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=surE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.906e-24
Identity = 78/197 (39.59%), Postives = 113/197 (57.36%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVT--AYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPT-DIPNNKGYKLTKQGTSIFK 687
            I++TNDDGI A G+++L   +  + ++ + V AP   KSA SHSI+   PI  R    +G+   AY++ GTPADC   G+S  L     DLVISGIN G N G  ++YSGTV+ A E   + VPS++IS D V    +  DY+ AA     +++  LAE   +   +   LNI++P  +  + KG K+ K G S +K
Sbjct:    3 ILITNDDGISARGIKTLAEKM--SKKHNIIVVAPREQKSASSHSISINIPIKIREEKIEGLDCKAYSLVGTPADCTQAGIS--LLAKGIDLVISGINRGFNSGTDILYSGTVSAAIEGALYDVPSIAISMD-VKWDRDDEDYSKAANWVSKVVD--LAE--KKYLKKNVVLNINVPNINEEDIKGLKVCKIGKSTYK 190          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_BRUSU (5'-nucleotidase surE OS=Brucella suis GN=surE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.906e-24
Identity = 74/192 (38.54%), Postives = 106/192 (55.21%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS--YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 672
            I++TNDDGI A GL  L R+    +   V V AP++ +S ++HS+T   P+  R  D      +A+ GTP DC  +GV   L P  PDLV+SG+N G+N    V YSGTVAGA E    GV ++++S  Y++ G +  V   T  AEA  P    ++  +    +PE   LN++ P   P   KG ++T QG
Sbjct:    3 ILLTNDDGIHAEGLAVLERIARKLSD-DVWVVAPETDQSGLAHSLTLSEPLRLRQID---ARHFALRGTPTDCVIMGVRHVL-PGAPDLVLSGVNSGANMADDVTYSGTVAGAMEGTLLGVRAIALSQEYEYAGDRRIVPWET--AEAHAP---ELIGRLMEAGWPEGVLLNLNFPNCAPEEVKGVRVTAQG 184          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_BRUO2 (5'-nucleotidase surE OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=surE PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.906e-24
Identity = 74/192 (38.54%), Postives = 106/192 (55.21%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS--YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 672
            I++TNDDGI A GL  L R+    +   V V AP++ +S ++HS+T   P+  R  D      +A+ GTP DC  +GV   L P  PDLV+SG+N G+N    V YSGTVAGA E    GV ++++S  Y++ G +  V   T  AEA  P    ++  +    +PE   LN++ P   P   KG ++T QG
Sbjct:    3 ILLTNDDGIHAEGLAVLERIARKLSD-DVWVVAPETDQSGLAHSLTLSEPLRLRQID---ARHFALRGTPTDCVIMGVRHVL-PGAPDLVLSGVNSGANMADDVTYSGTVAGAMEGTLLGVRAIALSQEYEYAGDRRIVPWET--AEAHAP---ELIGRLMEAGWPEGVLLNLNFPNCAPEEVKGVRVTAQG 184          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_BRUME (5'-nucleotidase surE OS=Brucella melitensis GN=surE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.906e-24
Identity = 74/192 (38.54%), Postives = 106/192 (55.21%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS--YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 672
            I++TNDDGI A GL  L R+    +   V V AP++ +S ++HS+T   P+  R  D      +A+ GTP DC  +GV   L P  PDLV+SG+N G+N    V YSGTVAGA E    GV ++++S  Y++ G +  V   T  AEA  P    ++  +    +PE   LN++ P   P   KG ++T QG
Sbjct:    3 ILLTNDDGIHAEGLAVLERIARKLSD-DVWVVAPETDQSGLAHSLTLSEPLRLRQID---ARHFALRGTPTDCVIMGVRHVL-PGAPDLVLSGVNSGANMADDVTYSGTVAGAMEGTLLGVRAIALSQEYEYAGDRRIVPWET--AEAHAP---ELIGRLMEAGWPEGVLLNLNFPNCAPEEVKGVRVTAQG 184          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_BRUMB (5'-nucleotidase surE OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=surE PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.906e-24
Identity = 74/192 (38.54%), Postives = 106/192 (55.21%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS--YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 672
            I++TNDDGI A GL  L R+    +   V V AP++ +S ++HS+T   P+  R  D      +A+ GTP DC  +GV   L P  PDLV+SG+N G+N    V YSGTVAGA E    GV ++++S  Y++ G +  V   T  AEA  P    ++  +    +PE   LN++ P   P   KG ++T QG
Sbjct:    3 ILLTNDDGIHAEGLAVLERIARKLSD-DVWVVAPETDQSGLAHSLTLSEPLRLRQID---ARHFALRGTPTDCVIMGVRHVL-PGAPDLVLSGVNSGANMADDVTYSGTVAGAMEGTLLGVRAIALSQEYEYAGDRRIVPWET--AEAHAP---ELIGRLMEAGWPEGVLLNLNFPNCAPEEVKGVRVTAQG 184          
The following BLAST results are available for this feature:
BLAST of CK934463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_CYAP41.459e-2436.795'-nucleotidase surE OS=Cyanothece sp. (strain PCC... [more]
SURE_ACAM11.459e-2440.215'-nucleotidase surE OS=Acaryochloris marina (stra... [more]
SURE1_THET21.459e-2439.595'-nucleotidase surE 1 OS=Thermus thermophilus (st... [more]
SURE_SYNR31.906e-2436.175'-nucleotidase surE OS=Synechococcus sp. (strain ... [more]
SURE_CYAP71.906e-2434.985'-nucleotidase surE OS=Cyanothece sp. (strain PCC... [more]
SURE_CLOBB1.906e-2439.595'-nucleotidase surE OS=Clostridium botulinum (str... [more]
SURE_BRUSU1.906e-2438.545'-nucleotidase surE OS=Brucella suis GN=surE PE=3... [more]
SURE_BRUO21.906e-2438.545'-nucleotidase surE OS=Brucella ovis (strain ATCC... [more]
SURE_BRUME1.906e-2438.545'-nucleotidase surE OS=Brucella melitensis GN=sur... [more]
SURE_BRUMB1.906e-2438.545'-nucleotidase surE OS=Brucella melitensis biotyp... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_H01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934463 ID=CK934463; Name=CK934463; organism=Citrus sinensis; type=EST; length=736bp
GGGGAATTCTTCTTCTTCTTCTTCTTGGACCGAACAATCCTGTAGCCGGA
GGAAGAAATGGAGCGTCGTGGAATCGCTATTGTTAACTCCGATCACAAGC
CAACGATTATGGTCACCAACGACGACGGGATCGACGCGCCTGGTTTGCGT
TCCCTCGTCCGCGTTCTCGTCTCCACCAATCGCTACACCGTCCAAGTCTG
CGCCCCCGATTCAGGAAAATCGGCTGTTAGTCATAGTATTACTTGGCGTC
ACCCAATTTCGGCCAGACCAGCAGATTTTGATGGAGTTACAGCCTATGCC
GTGTCTGGAACTCCAGCAGATTGTGCATCGTTGGGTGTCTCGCAAGCACT
CTTTCCTTCGGTCCCTGACCTGGTAATCAGTGGCATAAACATGGGTAGCA
ACTGTGGTTATCATGTTGTTTACTCTGGGACAGTTGCAGGTGCTCGAGAG
GCTTTCTTTCATGGTGTACCGTCTGTCTCTATATCATACGACTGGGTTGG
AGGTAAGAGCAATGTTAATGATTACACACTCGCTGCTGAGGCTTGTTTAC
CTATTATAAATGCAATACTGGCCGAGATCAGGAATCAAACTTATCCTGAA
AGATGCTTTCTAAACATAGATCTACCTACAGATATTCCTAATAATAAGGG
GTATAAACTTACTAAGCAGGGTACGAGCATATTCAAAATGGGGTGGAGAC
GAGTCACTTCTGAGATGCAAGGAGGGAAGATGTTAT
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