CK934463

Overview
NameCK934463
Unique NameCK934463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_GLOVI (5'-nucleotidase surE OS=Gloeobacter violaceus GN=surE PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24
Identity = 75/203 (36.95%), Postives = 114/203 (56.16%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPAD--FD-GVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVN-DYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQGTSIFKMGWRR 702
            I+V+NDDGI A G+R+L   L     +TV V  PD  +SA  H++T   P+ A   +  F+ G+ A+A++GTP+D   LG+  AL    PDLV+SGIN G+N G  V+YSGTV+ A E    G+PS+++S       S V  D+  AA+  +  + A    +  Q  PE   LN+++P  +P ++       G  + ++G RR
Sbjct:    3 ILVSNDDGILAQGIRTLANTLHRAG-HTVTVVCPDRERSATGHALTMHKPLRAEAVENLFEPGLAAWAINGTPSDSVKLGLD-ALLGERPDLVVSGINCGANLGSDVLYSGTVSAAMEGTIEGLPSIAVSL-----ASRVRCDFQPAADFLVRFVRA----LEVQPLPEAFLLNVNVPA-LPESE-----ILGARVCRLGMRR 188          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_BRUSI (5'-nucleotidase surE OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=surE PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24
Identity = 73/192 (38.02%), Postives = 106/192 (55.21%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS--YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 672
            I++TNDDGI A GL  L R+    +   V V AP++ +S ++HS+T   P+  R  D      +A+ GTP DC  +GV   L P  P+LV+SG+N G+N    V YSGTVAGA E    GV ++++S  Y++ G +  V   T  AEA  P    ++  +    +PE   LN++ P   P   KG ++T QG
Sbjct:    3 ILLTNDDGIHAEGLAVLERIARKLSD-DVWVVAPETDQSGLAHSLTLSEPLRLRQID---ARHFALRGTPTDCVIMGVRHVL-PGAPNLVLSGVNSGANMADDVTYSGTVAGAMEGTLLGVRAIALSQEYEYAGDRRIVPWET--AEAHAP---ELIGRLMEAGWPEGVLLNLNFPNCAPEEVKGVRVTAQG 184          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_LEGPC (5'-nucleotidase surE OS=Legionella pneumophila (strain Corby) GN=surE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.458e-24
Identity = 73/192 (38.02%), Postives = 113/192 (58.85%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQGT 675
            I+V+NDDG+ APG++ L   L +     V+V APD  +S  S+S+T   P+  +  D +G   Y+V GTP DC  L ++  L P + D+V+SGIN G+N G  V+YSGTVA A E  + G+P+++IS   VG   N+  Y  AA     I   ++ ++     P +  LN+++P D+P N  +G ++T+ GT
Sbjct:    3 ILVSNDDGVLAPGIKILANELSTLGE--VKVVAPDRNRSGASNSLTLTQPLRVKQLD-NGY--YSVDGTPTDCVHLALTGFLEP-IADIVVSGINEGANLGDDVLYSGTVAAAMEGRYLGLPAIAIS--MVG--DNIQHYETAA----IIAKQLVIKLSANKLPSQTILNVNVP-DLPLNQIRGMQVTRLGT 179          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_STRMK (5'-nucleotidase surE OS=Stenotrophomonas maltophilia (strain K279a) GN=surE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23
Identity = 73/191 (38.22%), Postives = 109/191 (57.07%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN--KGYKLTKQG 672
            I+V+NDDG+DA G+R L  VL     + V V APD  +S  S+S+T   PI  +  D   V+   V+GTP DC  L ++  L    PD+V+SGIN  +N G  V+YSGTV+ A E  F G+P+V++S   V    +   +  AA A + I+    A ++    P    LN+++P D+P N  KG+++T+ G
Sbjct:    3 ILVSNDDGVDAAGIRMLASVLREAG-HEVTVVAPDRDRSGASNSLTLDLPIRLKRIDHYTVS---VAGTPTDCVHLALT-GLLEFEPDIVVSGINNAANLGDDVIYSGTVSAAMEGRFLGLPAVAVSL--VTRNHDPKHFETAARAAVEIV----ARLKADPLPADTILNVNVP-DLPWNEVKGFEVTRLG 181          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_RHOPT (5'-nucleotidase surE OS=Rhodopseudomonas palustris (strain TIE-1) GN=surE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23
Identity = 70/190 (36.84%), Postives = 102/190 (53.68%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 672
            I+ TNDDGI APGL+++ ++  + +   V V AP+  +S VSHS++   P+  R     G   +AV GTP DC  +G    L    PDLV+SG+N G N    VVYSGT+AGA E    G+PS ++S ++     N   +  A      II  ++A       P+   +NI+ P   P+  KG  +T+QG
Sbjct:    3 ILCTNDDGIHAPGLKTVEQIARAISD-DVWVVAPELDQSGVSHSLSLNDPLRLREV---GPRHFAVRGTPTDCVIMGSRFILKDKAPDLVLSGVNRGRNVAEDVVYSGTIAGALEGTILGLPSFALSQEFTIETRNAPLWETARTHAPDIIRKVMA----AGVPKNTVVNINFPACTPDKVKGVVVTRQG 184          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_RHOPA (5'-nucleotidase surE OS=Rhodopseudomonas palustris GN=surE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23
Identity = 70/190 (36.84%), Postives = 102/190 (53.68%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 672
            I+ TNDDGI APGL+++ ++  + +   V V AP+  +S VSHS++   P+  R     G   +AV GTP DC  +G    L    PDLV+SG+N G N    VVYSGT+AGA E    G+PS ++S ++     N   +  A      II  ++A       P+   +NI+ P   P+  KG  +T+QG
Sbjct:    3 ILCTNDDGIHAPGLKTVEQIARAISD-DVWVVAPELDQSGVSHSLSLNDPLRLREV---GPRHFAVRGTPTDCVIMGSRFILKDKAPDLVLSGVNRGRNVAEDVVYSGTIAGALEGTILGLPSFALSQEFTIETRNAPLWETARTHAPDIIRKVMA----AGVPKNTVVNINFPACTPDKVKGVVVTRQG 184          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_RHILO (5'-nucleotidase surE OS=Rhizobium loti GN=surE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23
Identity = 73/198 (36.87%), Postives = 105/198 (53.03%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSIS--YDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQGTSIFKM 690
            I++TNDDGI A GL SL RV   T    V V AP+  +S  +HS++   P+  R     G   +AV GTP DC  +GV + L P  PD+++SGIN G+N    V YSGTVAGA E    G+ S+++S  Y +VG      D  +  E    +  A+L ++     P+   LN++ P  +P    G  +T QG  +  +
Sbjct:    3 ILLTNDDGIHAEGLASLERV-ARTLSDDVWVVAPEQDQSGYAHSLSISEPLRLRKI---GEKHFAVRGTPTDCVIMGVKKIL-PGAPDVILSGINSGANIADDVTYSGTVAGAMEGALLGIRSIALSQGYSYVG-----EDRIVPYETTEALAPALLKKLVATPLPDGVLLNVNFPNCLPEEVVGTVVTMQGKLVHSL 190          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_PARUW (5'-nucleotidase surE OS=Protochlamydia amoebophila (strain UWE25) GN=surE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23
Identity = 75/196 (38.27%), Postives = 109/196 (55.61%), Query Frame = 1
Query:   97 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTA--YAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLP-IINAILAEIRNQTYPERCFLNIDLP-TDIPNNKGYKLTKQG 672
            KP I+VTNDDG+ A G+R L + +   +   + + AP   +SAVS SIT R P+     D+    A  ++V+GTPADC  L ++  L P  P L++SGIN G+N G ++ YSGTVA   E    G+P ++ SY   G   N + + +  E+ +P I+N  L         E  FLN++ P T+    KG +LT QG
Sbjct:    4 KPLILVTNDDGVHAKGIRHLWQSI--QDLADLIIVAPQQEQSAVSLSITVRRPLHIEKVDWLNAQADVWSVNGTPADCVKLALNVVL-PKRPQLIVSGINRGTNAGRNIFYSGTVAAIMEGVMQGIPGIAFSY---GDYFNPSYHLI--ESFIPGIVNYAL----QNAMQEGTFLNVNFPKTEHGPIKGIRLTTQG 187          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_GEOSM (5'-nucleotidase surE OS=Geobacter sp. (strain M21) GN=surE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23
Identity = 66/178 (37.08%), Postives = 101/178 (56.74%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIP 639
            I++TNDDG+ +PGL +L++ +       V V APD  +SAVSH++T  HP+ A          ++V GTP DC +LG+  +L    PDLVISG+N G+N    V YSGTVA A EA   G+P++++S        +  ++  AA AC      +   +  +  P   +LN+++P D+P
Sbjct:    3 ILLTNDDGVHSPGLAALIKKVSEVAE--VVVVAPDREQSAVSHALTLHHPLRAARIR---ANVFSVEGTPTDCVNLGI-HSLLSYRPDLVISGVNRGANIADDVTYSGTVAAALEATLMGIPAIAVSL----VTRSAGEHFEAAAACAA---KLAVTVHQKGLPRDTYLNVNVP-DLP 166          
BLAST of CK934463 vs. ExPASy Swiss-Prot
Match: SURE_CYAA5 (5'-nucleotidase surE OS=Cyanothece sp. (strain ATCC 51142) GN=surE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23
Identity = 71/193 (36.79%), Postives = 107/193 (55.44%), Query Frame = 1
Query:  106 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSGKSAVSHSITWRHPISARPAD--FDG-VTAYAVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEIRNQTYPERCFLNIDLPTDIPNN-KGYKLTKQG 672
            I+++NDDGI A G+R+L   L     Y V V  PD  +SA  H +T   PI A   +  FD  +TA++ SGTP+DC  L +S +L  + PD ++SGIN GSN G  V+YSGTV+ A E    G+PS+++S   +   S+      A  AC      ++ ++ +   P+   LN+++P    +   G  LT+QG
Sbjct:    9 ILISNDDGIFALGVRTLANTLAQAG-YQVTVVCPDRERSATGHGLTLHRPIRADIVEDFFDPKITAWSCSGTPSDCVKLALS-SLIENRPDFIVSGINHGSNLGTDVLYSGTVSAAMEGIIEGIPSIAMS---LASFSSRQFQPGADFAC-----GLIQQLYDHPLPDSTLLNVNIPPVTADAIAGVMLTRQG 191          
The following BLAST results are available for this feature:
BLAST of CK934463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SURE_GLOVI7.242e-2436.955'-nucleotidase surE OS=Gloeobacter violaceus GN=s... [more]
SURE_BRUSI7.242e-2438.025'-nucleotidase surE OS=Brucella suis (strain ATCC... [more]
SURE_LEGPC9.458e-2438.025'-nucleotidase surE OS=Legionella pneumophila (st... [more]
SURE_STRMK1.235e-2338.225'-nucleotidase surE OS=Stenotrophomonas maltophil... [more]
SURE_RHOPT1.235e-2336.845'-nucleotidase surE OS=Rhodopseudomonas palustris... [more]
SURE_RHOPA1.235e-2336.845'-nucleotidase surE OS=Rhodopseudomonas palustris... [more]
SURE_RHILO1.235e-2336.875'-nucleotidase surE OS=Rhizobium loti GN=surE PE=... [more]
SURE_PARUW1.235e-2338.275'-nucleotidase surE OS=Protochlamydia amoebophila... [more]
SURE_GEOSM1.235e-2337.085'-nucleotidase surE OS=Geobacter sp. (strain M21)... [more]
SURE_CYAA51.235e-2336.795'-nucleotidase surE OS=Cyanothece sp. (strain ATC... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_H01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934463 ID=CK934463; Name=CK934463; organism=Citrus sinensis; type=EST; length=736bp
GGGGAATTCTTCTTCTTCTTCTTCTTGGACCGAACAATCCTGTAGCCGGA
GGAAGAAATGGAGCGTCGTGGAATCGCTATTGTTAACTCCGATCACAAGC
CAACGATTATGGTCACCAACGACGACGGGATCGACGCGCCTGGTTTGCGT
TCCCTCGTCCGCGTTCTCGTCTCCACCAATCGCTACACCGTCCAAGTCTG
CGCCCCCGATTCAGGAAAATCGGCTGTTAGTCATAGTATTACTTGGCGTC
ACCCAATTTCGGCCAGACCAGCAGATTTTGATGGAGTTACAGCCTATGCC
GTGTCTGGAACTCCAGCAGATTGTGCATCGTTGGGTGTCTCGCAAGCACT
CTTTCCTTCGGTCCCTGACCTGGTAATCAGTGGCATAAACATGGGTAGCA
ACTGTGGTTATCATGTTGTTTACTCTGGGACAGTTGCAGGTGCTCGAGAG
GCTTTCTTTCATGGTGTACCGTCTGTCTCTATATCATACGACTGGGTTGG
AGGTAAGAGCAATGTTAATGATTACACACTCGCTGCTGAGGCTTGTTTAC
CTATTATAAATGCAATACTGGCCGAGATCAGGAATCAAACTTATCCTGAA
AGATGCTTTCTAAACATAGATCTACCTACAGATATTCCTAATAATAAGGG
GTATAAACTTACTAAGCAGGGTACGAGCATATTCAAAATGGGGTGGAGAC
GAGTCACTTCTGAGATGCAAGGAGGGAAGATGTTAT
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