CK934467

Overview
NameCK934467
Unique NameCK934467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.357e-56
Identity = 103/180 (57.22%), Postives = 126/180 (70.00%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 707
            +G I+ R++F+ LL +RND  CPARGFYTY+AF+ AA AFP FG +GN   RKRE+AAF  QT HETTGGWP AP G ++WGYCF  E +PPSDYC P+  +PC    KY GRGPIQLS+N+NY              +NPDL+ATD  +SFK+A+WFWMT Q  KPS H+VI   W PS
Sbjct:   89 VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNY--GPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPS 266          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.024e-56
Identity = 100/178 (56.18%), Postives = 126/178 (70.79%), Query Frame = 3
Query:  189 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 710
            ++S+E+F+ LL +RND  CPARGFYTYDA + AA AFP F  +G++  RKRE+AAF  QT HETTGGW  AP G Y+WGYCF  E+   + YC P+  +PC    KY GRGPIQLS+NYNY              NNP+L+A+DPV+SFK+A+WFWMT Q PKPSCH+VI  +W PS+
Sbjct:   89 VVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNY--GPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSS 264          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.949e-56
Identity = 101/181 (55.80%), Postives = 127/181 (70.17%), Query Frame = 3
Query:  177 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDP-NYPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 710
            ++G+++   +FD +L+YRND RC   GFYTYDAFI AA++F GFG +G++  +K+E+AAF AQT HETTGGWP AP G YAWGYCF+SE +    YC P ++PC    KY GRGPIQL+ NYNY              NNPDLL+T+P +SFK+AIWFWMT Q  KPS H+VI   W PSA
Sbjct:   79 DVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNY--GLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSA 257          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.703e-55
Identity = 105/180 (58.33%), Postives = 124/180 (68.89%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 707
            +  I+SR +FD +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   RKRE+AAF AQT HETTGGW  AP G +AWGYCF  E    S+YC P+  +PC  GK Y GRGPIQLS NYNY               NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS
Sbjct:   80 VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPS 257          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.270e-54
Identity = 103/180 (57.22%), Postives = 121/180 (67.22%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 707
            +  I+SR  FD +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   +KRE+AAF AQT HETTGGW  AP G +AWGYCF  E    SDYC P+  +PC    +Y GRGPIQLS NYNY               NPDL+ATD  + FK+AIWFWMTAQPPKPS H VI  +W PS
Sbjct:   25 VSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPS 202          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.697e-54
Identity = 102/180 (56.67%), Postives = 121/180 (67.22%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 707
            +  IIS   FD +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   RKR++AAF AQT HETTGGW  AP G +AWGYCF  E    +DYC P+  +PC    +Y GRGPIQLS NYNY               NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS
Sbjct:   25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPS 202          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 211.075 bits (536), Expect = 4.828e-54
Identity = 104/180 (57.78%), Postives = 122/180 (67.78%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 707
            +  I+SR +FD +L +RND  C A+GFYTYDAF+ AA AF GFG +G    RKRE+AAF AQT HETTGGW  AP G +AWGYCF  E    S+YC P+  +PC  GK Y GRGPIQLS NYNY               NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS
Sbjct:   77 VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNY--GPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPS 254          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.189e-52
Identity = 98/184 (53.26%), Postives = 121/184 (65.76%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISE--VSPPSDYC--DPNYPCRG--KYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAN 713
            +  I+SR +FD +L +RND  CPA+ FYTYDAF+ AA AFP F  +G+   RKRE+AAF AQT HETTGGW  AP G Y+WGYCF  E   +  SDYC     +PC    KY GRGPIQ+S+NYNY              +NPDL+A+D  +SFK+A WFWMT Q PKPSCH V+  +W P+ N
Sbjct:   79 VASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNY--GPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGN 260          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.028e-52
Identity = 98/183 (53.55%), Postives = 123/183 (67.21%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCD--PNYPCRG--KYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAN 713
            +  IIS  +FD +L +RND+ C A+GFYTYDAF+ AA A+P F  +G+    KRE+AAF AQT HETTGGWP AP G Y+WGYCF  E +  +  YC+  P +PC    KY GRGPIQ+++NYNY              NNPDL+A+D  +SFK+A WFWMT Q PKPSCH VI  +W PSA+
Sbjct:   76 VASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNY--GPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSAD 256          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.007e-51
Identity = 95/180 (52.78%), Postives = 118/180 (65.56%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 707
            +  +IS+ +F+ +L +RND  C A+GFYTY+AFI A + F  FG +G+   R +EIAAF AQT HETTGGW  AP G Y+WGYC+  E   P DYC     +PC    KY GRGPIQ+S+NYNY              NNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI   W PS
Sbjct:    5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNY--GAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPS 182          
The following BLAST results are available for this feature:
BLAST of CK934467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI2_ORYSJ1.357e-5657.22Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI9_ORYSJ3.024e-5656.18Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIX_PEA3.949e-5655.80Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHIA_SECCE5.703e-5558.33Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI2_HORVU1.270e-5457.2226 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHIC_SECCE3.697e-5456.67Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHI1_HORVU4.828e-5457.7826 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHI1_ORYSJ1.189e-5253.26Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI3_ORYSJ2.028e-5253.55Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHID_SOLLC1.007e-5152.78Basic endochitinase (Fragment) OS=Solanum lycopers... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_F10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934467 ID=CK934467; Name=CK934467; organism=Citrus sinensis; type=EST; length=715bp
GGGGGAACCAAGCAGAGGATAATTGATATCATAACTNNNNCTTTCAAATG
AGGCTTATTGGGTCCTTACTAATTTTCTCTCTAGTTTTATCTTTTGTACT
AGGAGGCTCAGCACAGAACTGTGGAAGCGGCGTTGTGTACGGTGGACGTG
ATACCGGCCATGGGACGCATGGCGGTGAACTGGGCAAGATCATCTCAAGG
GAGATGTTTGATGACTTGCTTGAGTATAGAAATGATGAACGATGCCCTGC
CAGAGGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCCAAGCTTTTC
CAGGCTTTGGTAACTCTGGAAATGAAACCATGCGTAAAAGAGAAATCGCT
GCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCCCGATGC
ACCTGGTGGCGAATATGCTTGGGGATATTGCTTTATAAGCGAAGTTAGCC
CTCCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGAAGTACTGT
GGCCGAGGTCCAATTCAACTCTCTTGGAATTACAATTACTTACGGTGCGG
AGAAGGCCTAGGGCTAGGAGAGGAGTTGTTGAACAATCCAGACCTTCTTG
CTACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGATGACT
GCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGACGAATGGAA
ACCATCAGCAAATGA
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