CK934467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23 Identity = 64/167 (38.32%), Postives = 90/167 (53.89%), Query Frame = 3 Query: 180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR-GK-YCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPP 662 +G I+++ F+ ++ C + FYT D+FI AA FP F NS + +REIA FA HET +C+I E++ S DYCD N YPC GK Y GRGPIQLSWNYNY C P+L++++P ++F++ +WFWM + P Sbjct: 72 VGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHET-------------GHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGAC--GQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.675e-22 Identity = 67/162 (41.36%), Postives = 81/162 (50.00%), Query Frame = 3 Query: 189 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPP--SDYCDPN----YPCRG--KYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMT 650 I+S+ FD ++ + CP + FYT AF+ A P FGN G+ KREIAAFFA HETT C I E YCD + YPC KY GRGP+QLSWNYNY NP+ +ATD SFK+A+WFWMT Sbjct: 90 IVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETT-------------NLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.187e-22 Identity = 60/155 (38.71%), Postives = 82/155 (52.90%), Query Frame = 3 Query: 201 EMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 647 E F + ++ + C + FYT +F+ AA ++ GF KREIAAFFA HET C+I+E++ S DYCD N +PC+ KY GRGP+Q+SWNYNY +PD +A DP +SFK+A+WFWM Sbjct: 93 EAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM 232
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.312e-22 Identity = 58/155 (37.42%), Postives = 84/155 (54.19%), Query Frame = 3 Query: 201 EMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 647 E F + ++ + C + FYT +F+ AA+++ GF N KREIAAFFA HET C+I+E++ + DYCD + +PC+ KY GRGP+Q+SWN+NY +PD +A DP +SFK+A+WFWM Sbjct: 90 EAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHET-------------GHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM 229
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21 Identity = 59/160 (36.88%), Postives = 83/160 (51.88%), Query Frame = 3 Query: 189 IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCD----PNYPCRGK--YCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWM 647 I++ + + +++ + D C + FYT DAF+ A ++ FG G+E KREIAA FA HET +C+I E+ S DYCD YPC Y GRGPIQLSWN+NY P+ ++ D V+SFK+A+W+WM Sbjct: 71 ILTADFLNGIID-QADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHET-------------GHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNY--GPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM 214 The following BLAST results are available for this feature:
BLAST of CK934467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934467 ID=CK934467; Name=CK934467; organism=Citrus sinensis; type=EST; length=715bpback to top |