CK934471

Overview
NameCK934471
Unique NameCK934471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM3_PETHY (Calmodulin-related protein OS=Petunia hybrida GN=CAM53 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM2_SOYBN (Calmodulin-2 OS=Glycine max GN=CAM-2 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CAM1-1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1-1 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.261e-21
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 101.679 bits (252), Expect = 4.259e-21
Identity = 56/135 (41.48%), Postives = 83/135 (61.48%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF ++  R       E EL EAF ++D+D NGLISA EL  V+  LG K + +    MI+  D DGDG++N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMM 146          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM_ORYLA (Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.259e-21
Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 510
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF
Sbjct:    5 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 135          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.259e-21
Identity = 55/135 (40.74%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC-RTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D  G I   EF T+  R       E E++EAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMSRKMHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146          
The following BLAST results are available for this feature:
BLAST of CK934471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 316
Match NameE-valueIdentityDescription
CALM7_ARATH3.261e-2140.00Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 ... [more]
CALM3_PETHY3.261e-2140.00Calmodulin-related protein OS=Petunia hybrida GN=C... [more]
CALM2_SOYBN3.261e-2140.00Calmodulin-2 OS=Glycine max GN=CAM-2 PE=1 SV=2[more]
CALM1_PETHY3.261e-2140.00Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=2 SV=2[more]
CALM1_ORYSJ3.261e-2140.00Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ORYSI3.261e-2140.00Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1... [more]
CALM1_DAUCA3.261e-2140.00Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 ... [more]
CALM_TETPY4.259e-2141.48Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_ORYLA4.259e-2141.98Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm... [more]
CALM_EUGGR4.259e-2140.74Calmodulin OS=Euglena gracilis PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_G02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934471 ID=CK934471; Name=CK934471; organism=Citrus sinensis; type=EST; length=725bp
GGGGATACCGTGGTCTCTTAAATTATCTTTTCCCCCAAACAGAACTAAAG
AAAAAGAAAAGCAATGGCAGCAACGACGGAGGCAGATTCGAATAGGAAAC
AGCTAATAGTGAGCCCGGAGGAGATGCAGAAGATCTTCAACCAGTTCGAC
GAGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGAA
ATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAGG
ATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAACG
ATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGGC
GTTTGGTCTCTACGATCAGGACAAGAACGGTTTGATTTCGGCGGAGGAGT
TGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATGT
GTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATTT
TGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCGC
CGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATCA
ACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTCT
ACTACTTTTAATGTTAATAAACTCCGATGCATTTTCAATGGTTTACAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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