CK934471

Overview
NameCK934471
Unique NameCK934471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDPKT_ARATH (Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.956e-14
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGI--KCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            +++ F   D ++ G I+  EL   L  +GS   E E+ ++ME  D DK G I   EF T          E  L EAF  +D+D++G I+ +EL   +   G+    ++D    +I  VD D DG +N+EEF +MM
Sbjct:  390 LKQTFKNMDTDESGTITFDELRNGLHRLGSKLTESEIKQLMEAADVDKSGTIDYIEFVTATMHRHRLEKEENLIEAFKYFDKDRSGFITRDELKHSMTEYGMGDDATID---EVINDVDTDNDGRINYEEFVAMM 521          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: TNNC2_MELGA (Troponin C, skeletal muscle OS=Meleagris gallopavo GN=TNNC2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.861e-14
Identity = 43/138 (31.16%), Postives = 72/138 (52.17%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI----CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E +  F+ FD +  G IS  EL TV++ +G +  +EEL  ++E++D D  G I   EF  +     +  +    E EL   F ++D++ +G I  EEL  +L   G   + +    ++K  D + DG ++F+EF  MM
Sbjct:   21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEEIEDLMKDSDKNNDGRIDFDEFLKMM 158          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: TNNC2_HUMAN (Troponin C, skeletal muscle OS=Homo sapiens GN=TNNC2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.861e-14
Identity = 43/138 (31.16%), Postives = 74/138 (53.62%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI----CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E +  F+ FD +  G IS+ EL TV++ +G +  +EEL  ++E++D D  G I   EF  +     +  +    E EL E F ++D++ +G I  EEL  +    G   + +   +++K  D + DG ++F+EF  MM
Sbjct:   19 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 156          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML39_ARATH (Calcium-binding protein CML39 OS=Arabidopsis thaliana GN=CML39 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.861e-14
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELR---EAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            +++ +F   D N+DG+IS  EL    K++G    +EE    ++  D D DG + ++EF  + + +     E + R   EAF +Y  D    I+   L ++L +LG   + D C  MI+  D + DG ++F+EF  MM
Sbjct:   22 DLEAVFAYMDANRDGRISAEELKKSFKTLGEQMSDEEAEAAVKLSDIDGDGMLDINEFALLIKGNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDLNADGVLSFDEFALMM 158          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.861e-14
Identity = 50/144 (34.72%), Postives = 79/144 (54.86%), Query Frame = 1
Query:  109 VSPEEMQKI---FNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVL-NRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 528
            +S EE   I   F   D ++ GKI++ EL   L+ +G +  +++L  +M+  D D+DG++   EF  I         +  L++AF  +DQ+ NG I  EEL   L + LG   S +   A+I+ VD D DG +++EEF +MM T
Sbjct:  361 LSDEEASGIREGFQIMDTSQRGKINIDELKIGLQKLGHAIPQDDLQILMDAGDIDRDGYLDCDEFIAISVHLRKMGNDEHLKKAFAFFDQNNNGYIEIEELREALSDELG--TSEEVVDAIIRDVDTDKDGRISYEEFVTMMKT 502          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: TNNCA_HOMAM (Troponin C, isoform 2A OS=Homarus americanus PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14
Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT----SSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            +QK F+ FD +  G I+   +  +L+ MG    E+ L  V+ + D D  G +   EF  +           A + ELREAF +YD++ NG I+ + L  +L  L  + + +   ++I+ VD DG G ++F EF  MM
Sbjct:   12 LQKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQEVIAETDEDGSGELEFEEFVELAAKFLIEEDEEALKTELREAFRVYDKEGNGYITTDVLKEILRELDNRLTEEDLDSIIEEVDEDGSGTLDFNEFMEMM 148          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: TNNC1_PONLE (Troponin C, isotype alpha OS=Pontastacus leptodactylus PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14
Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEA---ELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            +QK F+ FD +  G I+   +  +L+ MG    E  L +V+ + D D  G I   EF E   +  S    EA   EL+EAF +YD+  +G I+ + L  +L  L  + + D    +I+ +D DG G ++F EF  MMT
Sbjct:   12 LQKAFDSFDTDSKGFITPETVGIILRMMGVKISERHLQQVISETDEDGSGEIEFEEFAELAAKFLSEEDEEALKKELKEAFRIYDRGGDGYITTQVLREILKELDNRLTEDNLDEIIEEIDEDGSGTIDFMEFMKMMT 149          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CETN1_BOVIN (Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.586e-14
Identity = 46/141 (32.62%), Postives = 77/141 (54.61%), Query Frame = 1
Query:  118 EEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAG-EAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF-RSMMTTSL 534
            +E+++ F+ FD +  G I + EL   ++++G   ++EE+ R++ D+D +  G IS ++F  +          + E+ +AF L+D D+ G IS + L  V   LG   + +    MI   D DGDG VN +EF R M  T+L
Sbjct:   31 QEVREAFDLFDADGSGTIDVKELKVAMRALGFEPRKEEMKRMIADVDKEGTGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEDEFLRIMKKTNL 171          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML15_ARATH (Probable calcium-binding protein CML15 OS=Arabidopsis thaliana GN=CML15 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14
Identity = 45/143 (31.47%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEA------ELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 531
            +++ IF++FD + DG +++ ELA +L+S+G     +++  ++  +D++ +GF+   EF+ +  T      E       +L E F  +D+D NG ISA EL   + ++G   +      MIK  D +GDG ++F EF S+M  S
Sbjct:    7 QLKDIFDRFDMDADGSLTILELAALLRSLGLKPSGDQIHVLLASMDSNGNGFV---EFDELVGTILPDLNEEVLINSEQLLEIFKSFDRDGNGFISAAELAGAMAKMGQPLTYKELTEMIKEADTNGDGVISFGEFASIMAKS 146          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML12_ARATH (Calmodulin-like protein 12 OS=Arabidopsis thaliana GN=CML12 PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14
Identity = 49/153 (32.03%), Postives = 74/153 (48.37%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEA------------------ELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            E ++ F  FD+N DG I+  EL TV+ S+G +  + +L  +M ++D D DG I   EF  +   + G                       E REAF ++D++ +G I+  EL   +  LG   +      MI   DADGDG ++F EF  +MT
Sbjct:  101 EYRESFRLFDKNGDGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLMAKNQGHDQAPRHTKKTMVDYQLTDDQILEFREAFRVFDKNGDGYITVNELRTTMRSLGETQTKAELQDMINEADADGDGTISFSEFVCVMT 253          

HSP 2 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGE-----------------AELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLKPGPAP 552
            E ++ F  FD+N DG I+  EL T+++S+G    + +L  +M + D D DG I   EF  +   + G                      E RE+F L+D++ +G I+ +EL  V+  LG   +      M+  VD DGDG ++F EF  +M  +     AP
Sbjct:   12 EYRESFRLFDKNGDGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDGDGTIDFPEFLCVMAKNQGHDQAPRHTKKTMADKLTDDQITEYRESFRLFDKNGDGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLMAKNQGHDQAP 172          
The following BLAST results are available for this feature:
BLAST of CK934471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 316
Match NameE-valueIdentityDescription
CDPKT_ARATH2.956e-1434.07Calcium-dependent protein kinase 29 OS=Arabidopsis... [more]
TNNC2_MELGA3.861e-1431.16Troponin C, skeletal muscle OS=Meleagris gallopavo... [more]
TNNC2_HUMAN3.861e-1431.16Troponin C, skeletal muscle OS=Homo sapiens GN=TNN... [more]
CML39_ARATH3.861e-1431.39Calcium-binding protein CML39 OS=Arabidopsis thali... [more]
CDPKW_ARATH3.861e-1434.72Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
TNNCA_HOMAM5.043e-1432.12Troponin C, isoform 2A OS=Homarus americanus PE=1 ... [more]
TNNC1_PONLE5.043e-1434.06Troponin C, isotype alpha OS=Pontastacus leptodact... [more]
CETN1_BOVIN6.586e-1432.62Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1[more]
CML15_ARATH8.602e-1431.47Probable calcium-binding protein CML15 OS=Arabidop... [more]
CML12_ARATH8.602e-1432.03Calmodulin-like protein 12 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_G02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934471 ID=CK934471; Name=CK934471; organism=Citrus sinensis; type=EST; length=725bp
GGGGATACCGTGGTCTCTTAAATTATCTTTTCCCCCAAACAGAACTAAAG
AAAAAGAAAAGCAATGGCAGCAACGACGGAGGCAGATTCGAATAGGAAAC
AGCTAATAGTGAGCCCGGAGGAGATGCAGAAGATCTTCAACCAGTTCGAC
GAGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGAA
ATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAGG
ATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAACG
ATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGGC
GTTTGGTCTCTACGATCAGGACAAGAACGGTTTGATTTCGGCGGAGGAGT
TGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATGT
GTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATTT
TGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCGC
CGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATCA
ACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTCT
ACTACTTTTAATGTTAATAAACTCCGATGCATTTTCAATGGTTTACAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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