CK934471

Overview
NameCK934471
Unique NameCK934471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: TNNC2_PONLE (Troponin C, isotype gamma OS=Pontastacus leptodactylus PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.123e-13
Identity = 43/138 (31.16%), Postives = 73/138 (52.90%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT----SSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            ++K F+ FD +  G I+   +  +L+ MG    E+ L +V+ + D D  G +   EF  +           A +AEL+EAF +YD+  +G I+ + L  +L  L  + + D    +I+ VD DG G ++F+EF  MM+
Sbjct:   12 LKKAFDSFDTDSKGFITPETVGVILRMMGVKISEKNLQQVIAETDEDGSGELEFEEFVELAAKFLIEEDEEALKAELKEAFRIYDKGGDGYITTDVLREILRELDNRLTEDDLDGIIEEVDEDGSGTLDFDEFMEMMS 149          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CABP1_MOUSE (Calcium-binding protein 1 OS=Mus musculus GN=Cabp1 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.123e-13
Identity = 48/163 (29.45%), Postives = 86/163 (52.76%), Query Frame = 1
Query:   55 RKAMAATTEADSNRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-----ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            RK  A   + D + +   +  EE+++ F +FD++KDG I+  +L   +++MG    E EL+ + + ++ +  G +   +F       +   ++   G  ELR+AF  +D + +G IS  EL   + + LG +        +I+ VD +GDG V+FEEF  MM+
Sbjct:   66 RKGFAENRQPDRSLRPEEI--EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 226          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CABP1_BOVIN (Calcium-binding protein 1 OS=Bos taurus GN=CABP1 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.123e-13
Identity = 48/163 (29.45%), Postives = 86/163 (52.76%), Query Frame = 1
Query:   55 RKAMAATTEADSNRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-----ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            RK  A   + D + +   +  EE+++ F +FD++KDG I+  +L   +++MG    E EL+ + + ++ +  G +   +F       +   ++   G  ELR+AF  +D + +G IS  EL   + + LG +        +I+ VD +GDG V+FEEF  MM+
Sbjct:   65 RKGFAENRQPDRSLRPEEI--EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 225          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CAST_SOLTU (Calcium-binding protein CAST OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 49/158 (31.01%), Postives = 84/158 (53.16%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG-----------------AAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIK--CSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLKP 540
            +++IF+ FD N D  IS+ EL+  L  +G      E+  +++     ++  +   +FET+ R+ +                  A  E++L+EAF ++D++ +G ISA+EL +VL +LG+     +D    MI  V+ D DG V+F EF+ MM T + P
Sbjct:   41 LRRIFDVFDRNHDCLISVEELSQALNLLGLDADLSEIESMVKLHIKPENTGLRFEDFETLHRSLNDVFFGSKCEDKLGLNPDPAQDESDLKEAFDVFDENGDGFISAKELQVVLEKLGLPEGSEIDRVEMMISSVEQDHDGRVDFFEFKDMMRTVIVP 198          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: TNNC_PATYE (Troponin C OS=Patinopecten yessoensis PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 43/154 (27.92%), Postives = 84/154 (54.55%), Query Frame = 1
Query:   73 TTEADSNRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 531
            T E  ++ KQ++    + ++ F   D+ K+G +S  +L  + KS+G   K++++    +++D +  G ++   + +   R       E EL+EAF + D++K G+I  + L  +L+ LG + + +    MI   D DG G V++EEF+ +M +S
Sbjct:    1 TEEFRASEKQIL----DAKQAFCNVDKKKEGTVSCKDLGAIFKSLGLLVKDDKIKDWSDEMDEEATGRLNCDAWIQLFERKLKEDLDERELKEAFRVLDKEKKGVIKVDVLRWILSSLGDELTEEEIENMIAETDTDGSGTVDYEEFKCLMMSS 150          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 50/160 (31.25%), Postives = 84/160 (52.50%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT-------------------SSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIK--CSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLKP 540
            +Q+IF+ FD+N DG I++ EL+  L  +G +    +L   +E      +  ++  +F ++ +T                   SS A  E++L EAF ++D++ +G ISA EL  VL +LG+     ++    MI  VD + DG V+F EF++MM T + P
Sbjct:   30 LQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDDFSSLHKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTVLKKLGLPEGGEMERVEKMIVSVDRNQDGRVDFFEFKNMMRTVVIP 189          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDPKY_ARATH (Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLKPGPAP 552
            ++++F   D +  G I+L EL   L   G+   E E+ ++ME  D D +G I   EF       +    E  L  AF  +D+D +G I+ EEL   L   G+    D    +I  VD D DG +N+EEF +MM     P P P
Sbjct:  374 LKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALREFGMNDGRD-IKEIISEVDGDNDGRINYEEFVAMMRKG-NPDPNP 514          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 53/174 (30.46%), Postives = 83/174 (47.70%), Query Frame = 1
Query:    1 GDTVVS*IIFSPKQN*RKRKAMAATTEADSNRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            GD V S +      N  K+KA+    E  S     I   E ++ +F   D++ DGKIS  EL   L+ +GS   E E+  +ME  D + +G +   EF  +         +   R+AF  +D+D +G I +EEL   L     +      + +++ VD D DG +N++EF  MM
Sbjct:  329 GDIVRSRLKQFSMMNRLKKKALRVIAEHLS-----IQEVEVIRNMFTLMDDDNDGKISYLELRAGLRKVGSQLGEPEIKLLMEVADVNGNGCLDYGEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEELREALTDELGEPDNSVIIDIMREVDTDKDGKINYDEFVVMM 497          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CABP1_RAT (Calcium-binding protein 1 OS=Rattus norvegicus GN=Cabp1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 44/142 (30.99%), Postives = 78/142 (54.93%), Query Frame = 1
Query:  118 EEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-----ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            EE+++ F +FD++KDG I+  +L   +++MG    E EL+ + + ++ +  G +   +F       +   ++   G  ELR+AF  +D + +G IS  EL   + + LG +        +I+ VD +GDG V+FEEF  MM+
Sbjct:  156 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 297          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CABP1_HUMAN (Calcium-binding protein 1 OS=Homo sapiens GN=CABP1 PE=1 SV=4)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 44/142 (30.99%), Postives = 78/142 (54.93%), Query Frame = 1
Query:  118 EEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-----ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            EE+++ F +FD++KDG I+  +L   +++MG    E EL+ + + ++ +  G +   +F       +   ++   G  ELR+AF  +D + +G IS  EL   + + LG +        +I+ VD +GDG V+FEEF  MM+
Sbjct:  228 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 369          
The following BLAST results are available for this feature:
BLAST of CK934471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 316
Match NameE-valueIdentityDescription
TNNC2_PONLE1.123e-1331.16Troponin C, isotype gamma OS=Pontastacus leptodact... [more]
CABP1_MOUSE1.123e-1329.45Calcium-binding protein 1 OS=Mus musculus GN=Cabp1... [more]
CABP1_BOVIN1.123e-1329.45Calcium-binding protein 1 OS=Bos taurus GN=CABP1 P... [more]
CAST_SOLTU1.467e-1331.01Calcium-binding protein CAST OS=Solanum tuberosum ... [more]
TNNC_PATYE1.916e-1327.92Troponin C OS=Patinopecten yessoensis PE=1 SV=1[more]
CML42_ARATH1.916e-1331.25Calcium-binding protein CML42 OS=Arabidopsis thali... [more]
CDPKY_ARATH1.916e-1333.57Calcium-dependent protein kinase 34 OS=Arabidopsis... [more]
CDPKU_ARATH1.916e-1330.46Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CABP1_RAT1.916e-1330.99Calcium-binding protein 1 OS=Rattus norvegicus GN=... [more]
CABP1_HUMAN1.916e-1330.99Calcium-binding protein 1 OS=Homo sapiens GN=CABP1... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_G02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934471 ID=CK934471; Name=CK934471; organism=Citrus sinensis; type=EST; length=725bp
GGGGATACCGTGGTCTCTTAAATTATCTTTTCCCCCAAACAGAACTAAAG
AAAAAGAAAAGCAATGGCAGCAACGACGGAGGCAGATTCGAATAGGAAAC
AGCTAATAGTGAGCCCGGAGGAGATGCAGAAGATCTTCAACCAGTTCGAC
GAGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGAA
ATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAGG
ATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAACG
ATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGGC
GTTTGGTCTCTACGATCAGGACAAGAACGGTTTGATTTCGGCGGAGGAGT
TGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATGT
GTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATTT
TGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCGC
CGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATCA
ACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTCT
ACTACTTTTAATGTTAATAAACTCCGATGCATTTTCAATGGTTTACAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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