CK934471

Overview
NameCK934471
Unique NameCK934471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML20_ARATH (Probable calcium-binding protein CML20 OS=Arabidopsis thaliana GN=CML20 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 43/136 (31.62%), Postives = 70/136 (51.47%), Query Frame = 1
Query:  118 EEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAG-EAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            +E+++ F  FD +  G I   EL   ++++G    EE++ +++ D+D D  G I   EF  +     G    + EL +AF + D DKNG IS +++  +   LG   +      M++  D D DG VN +EF  MM
Sbjct:   26 QEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINKMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELTKAFQIIDLDKNGKISPDDIKRMAKDLGENFTDAEIREMVEEADRDRDGEVNMDEFMRMM 161          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: SP15_HEMPU (15 kDa calcium-binding protein OS=Hemicentrotus pulcherrimus PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 47/132 (35.61%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  151 ENKDGKISLT--ELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSE--FETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLN-RLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 531
            ++KDG  S+T  EL   L+S G S+ EE+L +++ D+DTDK G I  SE       +       ++  ++AF   D+D NG++S EEL+L ++ R+    S +   A+I   D DGDG +N +EF  ++ +S
Sbjct:   19 KSKDGDNSITAKELGEFLESAGKSFSEEQLAQMISDVDTDKSGTIEFSEMLMGIAEKMMKWTWKKSHFQKAFDDMDKDGNGVLSPEELHLAMSTRIEPPMSKEAIDAIIAKADCDGDGKINRKEFVKLIKSS 150          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 50/153 (32.68%), Postives = 83/153 (54.25%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMED-LDTDKDGFISLSEFETICRTSS----GAAG-------EAELREAFGLYDQDKNGLISAEELNLVLNRLGI--KCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLKP 540
            + ++F+ FD+N DG I++ EL+  L  +G      +L   ++  +  DK G +   +F  + +T      G  G       E++L EAF ++D+D +G ISA EL  VL +LG+     ++    MI  VD++ DG V+F EF++MM T + P
Sbjct:   29 LHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTG-LRFDDFAALHKTLDESFFGGEGSCCDGSPESDLEEAFNVFDEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEFKNMMQTVVVP 180          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML24_ORYSJ (Probable calcium-binding protein CML24 OS=Oryza sativa subsp. japonica GN=CML24 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT---------------SSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGI--KCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            ++++F+ FD N DG+I++ ELA  L ++G       L   +     D    +   +FE++ R                  G  G+ E++EAF ++D D +G ISA EL  VL +LG+    S+     MI  VD D DG V+F EF+ MM
Sbjct:   40 LRRVFDLFDRNGDGEITVDELAQALDALGLEADRAGLAATVGAHVPDGAAGLRFEDFESLHRALGDALFGSLDVPEDGGGGGGGDEEMKEAFKVFDVDGDGFISASELQEVLKKLGMPEAGSLANVREMICNVDRDSDGRVDFGEFKCMM 189          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CATR4_PARTE (Caltractin ICL1d OS=Paramecium tetraurelia GN=Icl1d PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 42/136 (30.88%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            E+++ F+ FD +    I   EL   + S+G   K + + +++ DLDTD  G I  +EF + +    S    +A++++ F L+D ++ G+I+ ++L  V   LG          MI   D+DGD  V FE+F ++MT
Sbjct:   41 EIKEAFDLFDTDGTQSIDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVITLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMT 176          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CATR3_PARTE (Caltractin ICL1c OS=Paramecium tetraurelia GN=Icl1c PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 42/136 (30.88%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            E+++ F+ FD +    I   EL   + S+G   K + + +++ DLDTD  G I  +EF + +    S    +A++++ F L+D ++ G+I+ ++L  V   LG          MI   D+DGD  V FE+F ++MT
Sbjct:   43 EIKEAFDLFDTDGTQSIDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVITLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMT 178          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CATR2_PARTE (Caltractin ICL1b OS=Paramecium tetraurelia GN=Icl1b PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 42/136 (30.88%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            E+++ F+ FD +    I   EL   + S+G   K + + +++ DLDTD  G I  +EF + +    S    +A++++ F L+D ++ G+I+ ++L  V   LG          MI   D+DGD  V FE+F ++MT
Sbjct:   42 EIKEAFDLFDTDGTQSIDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGVITLKDLRKVAKELGETMDDSELQEMIDRADSDGDAQVTFEDFYNIMT 177          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: SM20_SCHMA (20 kDa calcium-binding protein OS=Schistosoma mansoni GN=SM20 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 1
Query:  133 IFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC--RTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 528
            +F +FD+    KIS T+L    +++  + K + L    + +D D  GFI  + F  IC  +       E +LR+AF + D++K G I  E+L  +L  LG   + +    MI+  D DG G V+F+EF  +MT+
Sbjct:   21 VFKRFDKRGQEKISTTDLGPAFRALNLTVKPDTLKEWADQVDDDATGFIDFNGF-LICYGKKLQEDQDERDLRDAFRVLDKNKRGEIDVEDLRWILKGLGDDLTEEEIDDMIRDTDTDGSGFVDFDEFYKLMTS 153          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDPKJ_ARATH (Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 43/133 (32.33%), Postives = 71/133 (53.38%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            ++ +F   D +K G I+  EL + L+ +GS   E E+ +++ED D D +G I   EF +          E  L +AF  +D+D +G IS +EL   +    +   +     +I  VDAD DG++N++EF +MM
Sbjct:  405 LKTMFANMDTDKSGTITYDELKSGLEKLGSRLTETEVKQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELETAMKEYNMGDDI-MIKEIISEVDADNDGSINYQEFCNMM 536          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDPKH_ARATH (Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 47/143 (32.87%), Postives = 69/143 (48.25%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLKPGPAP 552
            ++++F   D +  G I+L EL   L   G+   E E+ ++ME  D D +G I   EF       +    E  L  AF  +D+D +G I+ EEL   L   G+    D    +I  VD D DG +N++EF +MM     P P P
Sbjct:  379 LKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGMNDGRD-IKEIISEVDGDNDGRINYDEFVAMMRKG-NPDPIP 519          
The following BLAST results are available for this feature:
BLAST of CK934471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 316
Match NameE-valueIdentityDescription
CML20_ARATH2.503e-1331.62Probable calcium-binding protein CML20 OS=Arabidop... [more]
SP15_HEMPU3.269e-1335.6115 kDa calcium-binding protein OS=Hemicentrotus pu... [more]
CML43_ARATH3.269e-1332.68Probable calcium-binding protein CML43 OS=Arabidop... [more]
CML24_ORYSJ3.269e-1332.67Probable calcium-binding protein CML24 OS=Oryza sa... [more]
CATR4_PARTE3.269e-1330.88Caltractin ICL1d OS=Paramecium tetraurelia GN=Icl1... [more]
CATR3_PARTE3.269e-1330.88Caltractin ICL1c OS=Paramecium tetraurelia GN=Icl1... [more]
CATR2_PARTE3.269e-1330.88Caltractin ICL1b OS=Paramecium tetraurelia GN=Icl1... [more]
SM20_SCHMA4.269e-1332.8420 kDa calcium-binding protein OS=Schistosoma mans... [more]
CDPKJ_ARATH4.269e-1332.33Calcium-dependent protein kinase 19 OS=Arabidopsis... [more]
CDPKH_ARATH4.269e-1332.87Calcium-dependent protein kinase 17 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_G02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934471 ID=CK934471; Name=CK934471; organism=Citrus sinensis; type=EST; length=725bp
GGGGATACCGTGGTCTCTTAAATTATCTTTTCCCCCAAACAGAACTAAAG
AAAAAGAAAAGCAATGGCAGCAACGACGGAGGCAGATTCGAATAGGAAAC
AGCTAATAGTGAGCCCGGAGGAGATGCAGAAGATCTTCAACCAGTTCGAC
GAGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGAA
ATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAGG
ATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAACG
ATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGGC
GTTTGGTCTCTACGATCAGGACAAGAACGGTTTGATTTCGGCGGAGGAGT
TGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATGT
GTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATTT
TGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCGC
CGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATCA
ACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTCT
ACTACTTTTAATGTTAATAAACTCCGATGCATTTTCAATGGTTTACAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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