CK934471

Overview
NameCK934471
Unique NameCK934471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 1
Query:  130 KIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 513
            ++F + D NKDGK+ ++EL T L +MG S  + E  +++   DTDKD  +   EF    +       E +LR  F   D++++G + A+E+   L  LGI  S      ++  +D DG   +++ E+R
Sbjct:   27 ELFEKLDVNKDGKVDVSELKTGLAAMGFSMGKGEAQKIVTSGDTDKDEGLDFEEFSKYLKEH-----EKKLRLTFKSLDKNEDGRVDAKEIQQSLKDLGINLSDKDAEKILHSIDVDGTMTLDWNEWR 149          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: LPS1A_LYTPI (Calcium-binding protein LPS1-alpha OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 47/145 (32.41%), Postives = 70/145 (48.28%), Query Frame = 1
Query:  127 QKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICR--TSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV-AMIKPVDADGDGNVNFEEFRSMMTTSLKPGPAP 552
            Q+  + +D NKDG +S  EL  ++     ++ EE    ++  LD + DG +   EF       T        E+++ F   D+D NG IS +ELN  +  +  K  VDG    +I+  D DGDG+VN EEF   +   L  G  P
Sbjct:   22 QEFKDNYDTNKDGTVSCAELVKLM-----NWTEEMAQNIIARLDVNSDGHMQFDEFILYMEGSTKERLYSSDEIKQMFDDLDKDGNGRISPDELNKGVREIYTKV-VDGMANKLIQEADKDGDGHVNMEEFFDTLVVKLPIGMGP 160          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML16_ARATH (Probable calcium-binding protein CML16 OS=Arabidopsis thaliana GN=CML16 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11
Identity = 38/141 (26.95%), Postives = 74/141 (52.48%), Query Frame = 1
Query:  118 EEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAA---GEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 531
            ++++ IF +FD +KDG ++  ELA +L+S+G   + +++  ++  +D + +G +   E                + +L E F  +D+D NG I+A EL   + ++G   +      M+   D++GDG ++F EF  +M  S
Sbjct:   11 KQLKDIFARFDMDKDGSLTQLELAALLRSLGIKPRSDQISLLLNQIDRNGNGSVEFDELVVAILPDINEEVLINQEQLMEVFRSFDRDGNGSITAAELAGSMAKMGHPLTYRELTEMMTEADSNGDGVISFNEFSHIMAKS 151          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: TNNC_BRALA (Troponin C OS=Branchiostoma lanceolatum PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 42/139 (30.22%), Postives = 73/139 (52.52%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEA---ELREAFGLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            E +  F+ FDE+  G IS  EL T++K +G S   EEL ++++++D D  G I   EF E + R    +  E    ELR AF + D++ +G I  +E   + +   G   + D  +  +   D + DG  ++EE++ ++
Sbjct:   18 EFKMAFDMFDEDGGGDISTKELGTIMKRLGMSISREELQQMIDEVDEDASGTIDFEEFLEMMARAMQDSEREIPDDELRAAFRVLDKNGDGFIDKDEFRALASECAGDDLTDDELLEFMMDYDGNRDGRFDYEEWKEII 156          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML40_ARATH (Probable calcium-binding protein CML40 OS=Arabidopsis thaliana GN=CML40 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 42/139 (30.22%), Postives = 76/139 (54.68%), Query Frame = 1
Query:  118 EEMQKIFNQFDENKDGKISLTELATVLKSMGSSYK----EEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            +E Q++F+ FD++  GK+S++ +   + ++ S  +    +E+      +  TD D  + L +F  +      A  E +L+EAF LY++ +   I+ + L  +L+ LG   S+  C  MI   D + DG +NF+EFR+MM
Sbjct:   10 DEYQRVFSCFDKSHQGKVSVSTIERCVDAIKSGKRAVVDQEDTTNPNPEESTD-DKSLELEDFVKLVEEGEEADKEKDLKEAFKLYEESEG--ITPKSLKRMLSLLGESKSLKDCEVMISQFDINRDGIINFDEFRAMM 145          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 48/157 (30.57%), Postives = 80/157 (50.96%), Query Frame = 1
Query:   52 KRKAMAATTEADSNRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            K K +A    A+S  ++ I   + ++ +F   D +K G I+  EL + L  +GS   E E+ ++M+  D D +G I   EF  I  T      E+   +AF  +D+D +G I+ +EL   +   G+         +I  VD+D DG +N++EF +MM
Sbjct:  366 KLKQLALKVIAESLSEEEI---KGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSEVEVQQLMDAADVDGNGTIDYLEF--ITATMHRHKLESYEHQAFQYFDKDNSGFITKDELESAMKEYGMGDEAT-IKDIISEVDSDNDGRINYDEFCAMM 516          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 41/134 (30.60%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  130 KIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVL--NRLGIKCSVDGCVA-MIKPVDADGDGNVNFEEFRSMM 522
            ++F   D +K+G ++  EL   LK +G    + ++  +M+  DTD +G +S  EF T+         +  L+EAF  +D++ NG I  +EL + L  ++LG     D  +  +   VD + DG ++F+EF++MM
Sbjct:  374 QMFQTMDTDKNGHLTFEELRDGLKKIGQVVPDGDVKMLMDAADTDGNGMLSCDEFVTLSIHLKRMGCDEHLQEAFKYFDKNGNGFIELDELKVALCDDKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMM 507          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 45/142 (31.69%), Postives = 70/142 (49.30%), Query Frame = 1
Query:  109 VSPEEMQKI---FNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV-AMIKPVDADGDGNVNFEEFRSMM 522
            +  EE+Q +   F   D +  G I+  EL   L  +GS   E E+ ++M+  D D +G I   EF T             L +AF  +D+D +G I+ +EL   L   G+    D  +  ++  VD+D DG +N+EEF +MM
Sbjct:  389 IDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELESALKEYGM--GDDATIKEVLSDVDSDNDGRINYEEFCAMM 528          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDC31_YEAST (Cell division control protein 31 OS=Saccharomyces cerevisiae GN=CDC31 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 42/148 (28.38%), Postives = 73/148 (49.32%), Query Frame = 1
Query:   91 NRKQLIVSPEEMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEA-ELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 531
            N + L    +E+ + F+ FD N DG +   EL   +K++G    + E++ ++++ D++    +   +F  +            E++ AF L+D D  G IS + L  V   LG   + +   AMI+  D DGDG +N  EF ++ T S
Sbjct:   14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTDS 161          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: TNNC1_PIG (Troponin C, slow skeletal and cardiac muscles OS=Sus scrofa GN=TNNC1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 37/126 (29.37%), Postives = 66/126 (52.38%), Query Frame = 1
Query:  157 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522
            +DG IS  EL  V++ +G +   EEL  +++++D D  G +   EF  +     +  S    E EL + F ++D++ +G I  EEL ++L   G   + D    ++K  D + DG ++++EF   M
Sbjct:   32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157          
The following BLAST results are available for this feature:
BLAST of CK934471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 316
Match NameE-valueIdentityDescription
SCMC1_DANRE1.373e-1131.25Calcium-binding mitochondrial carrier protein SCaM... [more]
LPS1A_LYTPI1.373e-1132.41Calcium-binding protein LPS1-alpha OS=Lytechinus p... [more]
CML16_ARATH1.373e-1126.95Probable calcium-binding protein CML16 OS=Arabidop... [more]
TNNC_BRALA1.794e-1130.22Troponin C OS=Branchiostoma lanceolatum PE=1 SV=1[more]
CML40_ARATH1.794e-1130.22Probable calcium-binding protein CML40 OS=Arabidop... [more]
CDPK_DAUCA1.794e-1130.57Calcium-dependent protein kinase OS=Daucus carota ... [more]
CDPKO_ARATH1.794e-1130.60Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]
CDPK9_ARATH1.794e-1131.69Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]
CDC31_YEAST1.794e-1128.38Cell division control protein 31 OS=Saccharomyces ... [more]
TNNC1_PIG2.343e-1129.37Troponin C, slow skeletal and cardiac muscles OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_G02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934471 ID=CK934471; Name=CK934471; organism=Citrus sinensis; type=EST; length=725bp
GGGGATACCGTGGTCTCTTAAATTATCTTTTCCCCCAAACAGAACTAAAG
AAAAAGAAAAGCAATGGCAGCAACGACGGAGGCAGATTCGAATAGGAAAC
AGCTAATAGTGAGCCCGGAGGAGATGCAGAAGATCTTCAACCAGTTCGAC
GAGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGAA
ATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAGG
ATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAACG
ATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGGC
GTTTGGTCTCTACGATCAGGACAAGAACGGTTTGATTTCGGCGGAGGAGT
TGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATGT
GTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATTT
TGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCGC
CGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATCA
ACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTCT
ACTACTTTTAATGTTAATAAACTCCGATGCATTTTCAATGGTTTACAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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