CK934471

Overview
NameCK934471
Unique NameCK934471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5544 contig Csv1_Contig5544:58..782. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM1_BRAFL (Calmodulin-1 OS=Branchiostoma floridae PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.762e-23
Identity = 58/137 (42.34%), Postives = 85/137 (62.04%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 528
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF +MMT+
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM_STIJA (Calmodulin OS=Stichopus japonicus PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22
Identity = 58/137 (42.34%), Postives = 85/137 (62.04%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 528
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF +MMT+
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22
Identity = 58/137 (42.34%), Postives = 84/137 (61.31%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 528
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D DG I   EF T+  R       E E+REAF ++D+D +G ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT+
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTS 148          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22
Identity = 58/137 (42.34%), Postives = 84/137 (61.31%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 528
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT+
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTS 148          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22
Identity = 58/137 (42.34%), Postives = 85/137 (62.04%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 528
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF +MMT+
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTS 148          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALMB_ARBPU (Calmodulin-beta (Fragment) OS=Arbacia punctulata PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.014e-22
Identity = 58/137 (42.34%), Postives = 85/137 (62.04%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 528
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF +MMT+
Sbjct:    1 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTS 137          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML31_ARATH (Probable calcium-binding protein CML31 OS=Arabidopsis thaliana GN=CML31 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22
Identity = 58/140 (41.43%), Postives = 82/140 (58.57%), Query Frame = 1
Query:  124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE----LREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 531
            M +IF   D+NKDGKI   E A  ++        EE+ ++   LD D DG I   EF +    + G   + E    ++EAF LYD D +G ISA E+++VL RLG K +++ CV M++ VD D DG VNFEEF+ MM ++
Sbjct:    1 MAEIFESVDKNKDGKILWDEFAEAIRVFSPQITSEEIDKMFIVLDVDGDGQIDDVEFASCLMVNGGGEKDTEEEVVMKEAFDLYDMDGDGKISASEIHVVLKRLGEKHTMEDCVVMVQTVDKDSDGFVNFEEFKIMMNSN 140          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22
Identity = 58/136 (42.65%), Postives = 84/136 (61.76%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF +MMT
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMT 147          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM2_BRALA (Calmodulin-2 OS=Branchiostoma lanceolatum GN=CAM2 PE=2 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22
Identity = 57/137 (41.61%), Postives = 84/137 (61.31%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 528
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    M++  D DGDG VN+EEF  MMT+
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMVREADIDGDGQVNYEEFVEMMTS 148          
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM_XENLA (Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.729e-22
Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  121 EMQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 525
            E ++ F+ FD++ DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF  MMT
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147          
The following BLAST results are available for this feature:
BLAST of CK934471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 316
Match NameE-valueIdentityDescription
CALM1_BRAFL7.762e-2342.34Calmodulin-1 OS=Branchiostoma floridae PE=2 SV=2[more]
CALM_STIJA1.014e-2242.34Calmodulin OS=Stichopus japonicus PE=1 SV=2[more]
CALM_RENRE1.014e-2242.34Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_METSE1.014e-2242.34Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_HALOK1.014e-2242.34Calmodulin OS=Halichondria okadai PE=2 SV=3[more]
CALMB_ARBPU1.014e-2242.34Calmodulin-beta (Fragment) OS=Arbacia punctulata P... [more]
CML31_ARATH1.324e-2241.43Probable calcium-binding protein CML31 OS=Arabidop... [more]
CALMB_HALRO1.324e-2242.65Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]
CALM2_BRALA1.324e-2241.61Calmodulin-2 OS=Branchiostoma lanceolatum GN=CAM2 ... [more]
CALM_XENLA1.729e-2242.65Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_G02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934471 ID=CK934471; Name=CK934471; organism=Citrus sinensis; type=EST; length=725bp
GGGGATACCGTGGTCTCTTAAATTATCTTTTCCCCCAAACAGAACTAAAG
AAAAAGAAAAGCAATGGCAGCAACGACGGAGGCAGATTCGAATAGGAAAC
AGCTAATAGTGAGCCCGGAGGAGATGCAGAAGATCTTCAACCAGTTCGAC
GAGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGAA
ATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAGG
ATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAACG
ATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGGC
GTTTGGTCTCTACGATCAGGACAAGAACGGTTTGATTTCGGCGGAGGAGT
TGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATGT
GTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATTT
TGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCGC
CGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATCA
ACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTCT
ACTACTTTTAATGTTAATAAACTCCGATGCATTTTCAATGGTTTACAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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