CK934471
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: TNNC1_MOUSE (Troponin C, slow skeletal and cardiac muscles OS=Mus musculus GN=Tnnc1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 36/126 (28.57%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 157 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522 +DG IS EL V++ +G + EEL +++++D D G + EF + + S E EL + F ++D++ +G I +EL ++L G + D ++K D + DG ++++EF M Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: TNNC1_HUMAN (Troponin C, slow skeletal and cardiac muscles OS=Homo sapiens GN=TNNC1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 36/126 (28.57%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 157 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522 +DG IS EL V++ +G + EEL +++++D D G + EF + + S E EL + F ++D++ +G I +EL ++L G + D ++K D + DG ++++EF M Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CML27_ORYSJ (Probable calcium-binding protein CML27 OS=Oryza sativa subsp. japonica GN=CML27 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 46/151 (30.46%), Postives = 74/151 (49.01%), Query Frame = 1 Query: 124 MQKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAA----------------GEAELREAFGLYDQDKNGLISAEELNLVLNRLGI--KCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 522 ++++F+ FD N DG+I+L E+A+ L ++G L + + +FE + R A E +++EAF ++D+D +G ISA EL VL +LG+ ++ MI VD D DG V+F EF+ MM Sbjct: 32 LRRVFDLFDRNGDGEITLDEMASALDALGLGADRAGLEATVGGYIPAGAAGLRFGDFEALHRALGDALFGPVEEEEPGKQGEDDDEGDMKEAFRVFDEDGDGFISAAELQAVLKKLGLPEARNLATVQEMICNVDRDCDGRVDFGEFKCMM 182
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CDPKX_ARATH (Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 44/142 (30.99%), Postives = 70/142 (49.30%), Query Frame = 1 Query: 109 VSPEEMQKI---FNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV-AMIKPVDADGDGNVNFEEFRSMM 522 + EE+Q + F D + G I+ EL L +GS E E+ ++M+ D D +G I EF T + +AF +D+D +G I+ +EL L G+ D + ++ VDAD DG +N++EF +MM Sbjct: 371 IDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSRLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENVYKAFQHFDKDGSGYITTDELEAALKEYGM--GDDATIKEILSDVDADNDGRINYDEFCAMM 510
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: CALM_STRPU (Calmodulin (Fragment) OS=Strongylocentrotus purpuratus PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 331 EAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 528 E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D DGDG VN+EEF +MMT+ Sbjct: 14 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTS 79
BLAST of CK934471 vs. ExPASy Swiss-Prot
Match: LPS1B_LYTPI (Calcium-binding protein LPS1-beta (Fragment) OS=Lytechinus pictus PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 43/138 (31.16%), Postives = 66/138 (47.83%), Query Frame = 1 Query: 127 QKIFNQFDENKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICR--TSSGAAGEAELREAFGLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSL 534 Q+ + +D NKDG +S ELA ++ EEE R++ +D + DG + EF T E+++ F D+D NG IS +EL+ + + K +I+ D DGDG+VN EEF + L Sbjct: 22 QEFKDNYDTNKDGTVSCAELAKLMDC-----PEEEAQRIITGVDVNCDGRMQFDEFLLYMEGYTKERLYSSDEIKQMFDDLDKDGNGRISPDELSKGVGEISTKLVEGMANKLIQEADKDGDGHVNMEEFVDTLVAKL 154 The following BLAST results are available for this feature:
BLAST of CK934471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 316
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934471 ID=CK934471; Name=CK934471; organism=Citrus sinensis; type=EST; length=725bpback to top |