CK934484

Overview
NameCK934484
Unique NameCK934484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length468
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7736 contig Csv1_Contig7736:819..1286. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934484 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.393e-20
Identity = 46/79 (58.23%), Postives = 62/79 (78.48%), Query Frame = 2
Query:    5 DLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 241
            DL LL EL  R+    + + +  +FHPV ++LS+L KAPLVPPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  429 DLALLTELCQRVSFCTDMDPEPQTFHPVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of CK934484 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.188e-19
Identity = 45/79 (56.96%), Postives = 60/79 (75.95%), Query Frame = 2
Query:    5 DLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 241
            DLVLL EL  R+    + + +   FH V ++LS+L KAPLVPPG+PVVNAL +QR+ +ENI RACVGL P+N+M+LE+K
Sbjct:  429 DLVLLTELCQRVSFCTDSDPEPQGFHTVLSLLSFLFKAPLVPPGSPVVNALFRQRSCIENIFRACVGLPPQNHMLLEHK 507          
BLAST of CK934484 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.551e-19
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    5 DLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 241
            DL LL EL  R+    + +    SFHPV ++L +L KAPL PPG+PVVNAL +QR+ +ENILRACVGL P+N+M+LE+K
Sbjct:  429 DLALLTELCQRVSFCTDVDPDPQSFHPVLSLLGFLFKAPLAPPGSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHK 507          
BLAST of CK934484 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.517e-17
Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 2
Query:    5 DLVLLAELSTRIQLK-AEGEGK-FHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 241
            DLV+L ELSTRIQL+ AE E   +  F PV ++LSYL KAPLVP G+ VVN+L +QRA +ENILR C+GL P ++M LE +
Sbjct:  433 DLVILGELSTRIQLRNAEKESAPWVPFKPVLSLLSYLCKAPLVPQGSQVVNSLFRQRAAIENILRGCIGLPPISHMTLEQR 513          
BLAST of CK934484 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 2.398e-12
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = 2
Query:    5 DLVLLAELSTRIQLKA-----EGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILE 235
            DL+++ E  TR+  K      E  GKF +F+PV T LSY  KAPL  PG   VN L+KQR  LEN LR  +GL  +N +  E
Sbjct:  448 DLLVMTEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALENFLRLLIGLPSQNELRFE 529          
BLAST of CK934484 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.091e-12
Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 2
Query:    5 DLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRAMLENILRACVGLAPENNMILE 235
            DLV+  E +TR+Q+K  G+  +   +PVA++LSY  KAPL  PG   +N L+KQR  L N+L   VGL  +N +  E
Sbjct:  440 DLVVATEFATRVQVKGPGKSDYDELYPVASLLSYWLKAPLARPGFKPINGLNKQRQQLVNLLSVLVGLPIDNELRFE 516          
The following BLAST results are available for this feature:
BLAST of CK934484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
INO1_HUMAN2.393e-2058.23Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_MOUSE1.188e-1956.96Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_BOVIN1.551e-1956.96Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_DROME5.517e-1759.26Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_YEAST2.398e-1246.34Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]
INO1_CANAL4.091e-1244.16Inositol-3-phosphate synthase OS=Candida albicans ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_F09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934484 ID=CK934484; Name=CK934484; organism=Citrus sinensis; type=EST; length=468bp
GGGAGATTTGGTTCTGCTGGCTGAACTCAGCACCAGGATCCAGCTCAAAG
CTGAAGGAGAGGGCAAATTCCACTCTTTCCACCCTGTGGCTACAATTCTC
AGCTACCTCACCAAGGCTCCTCTGGTCCCTCCAGGCACACCAGTGGTGAA
TGCGCTGTCGAAGCAGCGTGCAATGCTTGAGAACATTCTGAGGGCTTGCG
TTGGCTTGGCTCCTGAGAACAACATGATTTTGGAATACAAGTGAAGAACT
TGCAGGGGAGAAAAGTGGAAGAACCGGTTTTCCCTTTCTCTGTCACCAAT
CAAAGCTGTGGTGGTCCATTTAATTACTGATTGTAATGTCTTGTGTCATG
AAATTGTGGTTAATATTAGTGTGTCCTGTATGTTTGCTCTTTTATTTTTT
TAATGAAGGTGCTGGAGTGTAGCCCATTGCCTTTGTAGCTAAAAAAAAAA
AAAAAAAAAAAAAAAAAA
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