CK934489

Overview
NameCK934489
Unique NameCK934489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1188 contig Csv1_Contig1188:1..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934489 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.088e-81
Identity = 148/250 (59.20%), Postives = 174/250 (69.60%), Query Frame = 3
Query:  111 AQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTA-GDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRL 833
            AQNCGS   G  C  G+CCS+FGWCG T DYC  G CQS C         P  G   G GG+LG  IS  MF+ +L++RN+  C  + FY+Y+AFI AA++FP FG SG+   RKREIAAFFAQT HETTGGW  AP G YAWGYCF RE G    DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VII  W PS+ D  A RL
Sbjct:   26 AQNCGSQGGGKACASGQCCSKFGWCGNTNDYCGSGNCQSQC---------PGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERG-NPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRL 265          
BLAST of CK934489 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.562e-81
Identity = 141/245 (57.55%), Postives = 170/245 (69.39%), Query Frame = 3
Query:  114 QNCG---SGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRL 833
            + CG    G +CPGG CCS+FGWCG TTDYC + CQS C            G +    +L  +ISR  F+ +L++RND  CPA+ FYTYDAFI AAKA+P+FGN+G+   RKREIAAF  QT HETTGGW  AP G YAWGYCF RE   ++     P +PC    +YYGRGPIQ++WN NY +CG A+GVDLLN PDL+ATD V+SFKSA+WFWMTAQ PKPS H+VI   W PS+ DV A RL
Sbjct:   27 EQCGRQAGGALCPGGNCCSQFGWCGSTTDYCGKDCQSQCG-----------GPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRL 260          
BLAST of CK934489 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 6.076e-81
Identity = 144/249 (57.83%), Postives = 174/249 (69.88%), Query Frame = 3
Query:  111 AQNCG---SGVVCPGGECCSRFGWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRL 833
            A+ CG    G +CP G CCS FGWCG T  YC + GCQS C     G   P     G  G+L  IISR  F+D+L++RND  CPAR FYTYDAFI AAK+FP FG +G+   RK+EIAAFF QT HETTGGW  AP G Y+WGYCF +E    SS+YC P+  +PC     YYGRGP+QL+WN NY +CG A+G DLLNNPDL++ DPV++FK+AIWFWMT Q PKPSCH VI+ +W+PS  D  AGR+
Sbjct:   20 AEQCGRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQC-----GGTPP-----GPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQN-PSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRV 257          
BLAST of CK934489 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.036e-80
Identity = 148/251 (58.96%), Postives = 175/251 (69.72%), Query Frame = 3
Query:  108 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRL 833
            SA+ CG    G  C  G CCS FGWCG T DYC  G CQS C      +  P  G    GG++G +IS  MF+ +L++RND  C  +  FY+Y+AFI AA++F  FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G+   DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VII  W+PSA D  A RL
Sbjct:   17 SAEQCGKQAGGARCAAGLCCSNFGWCGNTNDYCGPGKCQSQCPSGPSPK-PPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRL 265          
BLAST of CK934489 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 6.718e-80
Identity = 141/253 (55.73%), Postives = 178/253 (70.36%), Query Frame = 3
Query:  111 AQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELG-----KIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRL 833
            A+ CGS   G +CP   CCS +GWCG T+DYC +GCQS C+   CG      G  G GG  G      ++S+++FE LL +RND  CPAR FYTYDA + AA AFP F  +G++  RKRE+AAF  QT HETTGGW  AP G Y+WGYCF  E+GA +S YC P+  +PC    KY+GRGPIQL++N NY   GEA+G DLLNNP+L+A+DPV+SFK+A+WFWMT Q PKPSCH+VI  +W PS+ D+ AGR+
Sbjct:   23 AEQCGSQAGGALCPNCLCCSSYGWCGSTSDYCGDGCQSQCDG--CGGGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRV 272          
BLAST of CK934489 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 7.428e-79
Identity = 146/251 (58.17%), Postives = 172/251 (68.53%), Query Frame = 3
Query:  108 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRL 833
            SA+ CGS   G +C  G CCS+FGWCG T DYC  G CQS C            G  G  G+LG +IS  MF+ +L +RND  C  +  FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF RE G+   DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+
Sbjct:   17 SAEQCGSQAGGALCASGLCCSKFGWCGDTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRV 255          
BLAST of CK934489 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.267e-78
Identity = 144/251 (57.37%), Postives = 172/251 (68.53%), Query Frame = 3
Query:  108 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRL 833
            SA+ CGS   G +C  G CCS+FGWCG T +YC  G CQS C            G  G  G+LG +IS  MF+ +L +RND  C  +  FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYCF RE G+   DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+
Sbjct:   21 SAEQCGSQAGGALCASGLCCSKFGWCGNTNEYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRV 259          
BLAST of CK934489 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.823e-78
Identity = 145/251 (57.77%), Postives = 171/251 (68.13%), Query Frame = 3
Query:  108 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRL 833
            SA+ CGS   G +C  G CCS+FGWCG T DYC  G CQS C            G  G  G+LG +IS  MF+ +L +RND  C  +  FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYCF RE G+   DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+
Sbjct:   17 SAEQCGSQAGGALCAPGLCCSKFGWCGNTNDYCGPGNCQSQC-----------PGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPG-DYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRV 255          
BLAST of CK934489 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 1.073e-77
Identity = 143/251 (56.97%), Postives = 170/251 (67.73%), Query Frame = 3
Query:  108 SAQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARC-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRL 833
            SA+ CGS   G +C  G CCS+FGWCG T DYC  G CQS C               G  G+LG +IS  MF+ +L +RND  C  +  FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGW  AP G YAWGYCF RE G+   DYC P+  +PC    KY+GRGPIQ++ N NY  CG A+GVDLLNNPDL+ATD ++SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+
Sbjct:   17 SAEQCGSQAGGALCASGLCCSKFGWCGNTNDYCGPGNCQSQC-------------PGGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPG-DYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRV 253          
BLAST of CK934489 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.401e-77
Identity = 145/252 (57.54%), Postives = 174/252 (69.05%), Query Frame = 3
Query:  111 AQNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCG----ECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR-GK-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRL 833
            A+ CGS   G  CP   CCSRFGWCG T+DYC +GCQS C    CG       P    +G GG +  I+SR +F+ +L +RND  C A+ FYTYDAF+ AA AFP FG +G+   RKRE+AAF AQT HETTGGW  AP G +AWGYCF +E G A+S+YC P+  +PC  GK YYGRGPIQL+ N NY   G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS H VI  +W PS  D  AGR+
Sbjct:   19 AEQCGSQAGGATCPNCLCCSRFGWCGSTSDYCGDGCQSQC--AGCGGGGTPVTPTPTPSGGGG-VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERG-ATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVITGQWSPSGTDRAAGRV 266          
The following BLAST results are available for this feature:
BLAST of CK934489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHIT_SOLTU2.088e-8159.20Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHI5_PHAVU3.562e-8157.55Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHI2_BRANA6.076e-8157.83Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHI4_SOLTU1.036e-8058.96Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHI9_ORYSJ6.718e-8055.73Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_SOLTU7.428e-7958.17Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHIC_SOLLC1.267e-7857.37Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI3_SOLTU2.823e-7857.77Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHI2_SOLTU1.073e-7756.97Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHIA_SECCE1.401e-7757.54Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_E04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934489 ID=CK934489; Name=CK934489; organism=Citrus sinensis; type=EST; length=833bp
GGGACACCAAGCAGAGGATAATTGATATCATAACTGTTGCTTTCAAAATG
AGGCTTATTGGGTCCTTACTAATTTTCTCTCTGGTTTTATCTTTTGTACT
AGGAGGCTCAGCACAGAACTGTGGAAGCGGCGTTGTGTGCCCAGGAGGGG
AGTGTTGTAGTCGATTTGGTTGGTGTGGCCTAACAACAGACTACTGTTGT
GAAGGCTGCCAAAGTAACTGTAATCAGGTTGTTTGCGGTGAATGTGATCC
CGACGACGGGACGGCTGGCGATGGCGGTGAACTGGGCAAGATCATCTCAA
GGAAGATGTTTGAAGACTTGCTTGAGTATAGAAATGATAAACGATGCCCT
GCCAGATGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCAAAGCTTT
TCCAGCCTTTGGTAATTCTGGAAATGAAACCATGCGTAAAAGAGAAATTG
CTGCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCCCGAT
GCACCTGGTGGCGAATATGCTTGGGGATATTGCTTTAATAGGGAAGTTGG
TGCTGCGTCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGAAGT
ACTATGGCCGAGGTCCAATTCAACTCACTTGGAATTGCAATTACTTAAGG
TGCGGAGAAGCCTTGGGGGTGGACTTGTTGAACAATCCAGACCTACTTGC
CACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGATGACTG
CACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGACGAATGGAAA
CCATCAGCAAATGACGTAAACGCCGGCCGGCTT
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