CK934491
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934491 vs. ExPASy Swiss-Prot
Match: RS13_STRMU (30S ribosomal protein S13 OS=Streptococcus mutans GN=rpsM PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.072e-27 Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 214 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFSALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 570 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR L I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVVSLTYVYGIGLPTSKKILAAAGVSEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNLNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of CK934491 vs. ExPASy Swiss-Prot
Match: RS13_RICRS (30S ribosomal protein S13 OS=Rickettsia rickettsii (strain Sheila Smith) GN=rpsM PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.072e-27 Identity = 62/122 (50.82%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 214 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKM-ENKITKDMSEEELITIRDEV-SKYMIEGDLRRFSALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKA 573 AR+ V IP+NKR+ SL YI+G+G T A +I K+ ++K K+++++ELI +R+ + S+Y +EGDLRR L I++ K+I+CY+G+RHI+ LP RGQ+T +N RT KGK +AIAGKKKA Sbjct: 2 ARIASVNIPDNKRVVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNIIESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGKKKA 123
BLAST of CK934491 vs. ExPASy Swiss-Prot
Match: RS13_RICRO (30S ribosomal protein S13 OS=Rickettsia rickettsii (strain Iowa) GN=rpsM PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.072e-27 Identity = 62/122 (50.82%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 214 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKM-ENKITKDMSEEELITIRDEV-SKYMIEGDLRRFSALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKA 573 AR+ V IP+NKR+ SL YI+G+G T A +I K+ ++K K+++++ELI +R+ + S+Y +EGDLRR L I++ K+I+CY+G+RHI+ LP RGQ+T +N RT KGK +AIAGKKKA Sbjct: 2 ARIASVNIPDNKRVVVSLTYIYGLGPTMAAEICNKAKISKDKKVKELTDQELIGLRNIIESEYKVEGDLRREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGKKKA 123
BLAST of CK934491 vs. ExPASy Swiss-Prot
Match: RS13_CYAP7 (30S ribosomal protein S13 OS=Cyanothece sp. (strain PCC 7424) GN=rpsM PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.072e-27 Identity = 57/123 (46.34%), Postives = 89/123 (72.36%), Query Frame = 1 Query: 214 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKME-NKITKDMSEEELITIRDEV-SKYMIEGDLRRFSALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAP 576 AR+ GV++P +KR+E +L Y++G+G +R+++IL + + + KD+S+E+ + +R + + Y IEGDLRR+ + I+RL +I YRG RH QGLP RGQ T+ N RT +G+R+ +AGKKKAP Sbjct: 2 ARIAGVDLPRDKRVEIALTYLYGIGLSRSKEILANTGVNPDTRVKDLSDEDALALRSYIEANYQIEGDLRRWETMNIKRLVDIGTYRGRRHRQGLPVRGQRTRTNARTRRGRRLTVAGKKKAP 124
BLAST of CK934491 vs. ExPASy Swiss-Prot
Match: RR13_GRATL (30S ribosomal protein S13, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rps13 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.072e-27 Identity = 61/123 (49.59%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 217 RVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSK-YMIEGDLRRFSALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKKAPR 579 R+ GV++P NKRIE SL YI+G+G+++A +IL LK+ I TK++ +E+++ IR ++ Y IEGDL+R ++ I+RL I YRG RH GLP RGQ+T+ N RT +G + +AGKKKAPR Sbjct: 3 RIVGVDLPKNKRIEISLTYIYGIGKSKAIEILEQLKINRNIKTKELKDEQIVLIRQILNNSYQIEGDLKRVESMNIKRLMTISSYRGKRHQLGLPLRGQNTRTNARTKRGIKKTMAGKKKAPR 125
BLAST of CK934491 vs. ExPASy Swiss-Prot
Match: RS13_STRPZ (30S ribosomal protein S13 OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 214 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFSALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 570 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR + I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of CK934491 vs. ExPASy Swiss-Prot
Match: RS13_STRPM (30S ribosomal protein S13 OS=Streptococcus pyogenes serotype M28 GN=rpsM PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 214 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFSALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 570 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR + I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of CK934491 vs. ExPASy Swiss-Prot
Match: RS13_STRPG (30S ribosomal protein S13 OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 214 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFSALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 570 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR + I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of CK934491 vs. ExPASy Swiss-Prot
Match: RS13_STRPF (30S ribosomal protein S13 OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 214 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFSALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 570 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR + I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121
BLAST of CK934491 vs. ExPASy Swiss-Prot
Match: RS13_STRPD (30S ribosomal protein S13 OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=rpsM PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.624e-27 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 214 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARQILVDLKMENKI-TKDMSEEELITIRDEVSKYMIEGDLRRFSALAIRRLKEIQCYRGIRHIQGLPCRGQHTKNNCRTLKGKRVAIAGKKK 570 AR+ GV+IPN+KR+ SL Y++G+G +++IL + I KD++ ++ IR EV +EGDLRR + I+RL EI YRGIRH +GLP RGQ+TKNN RT KGK VAIAGKKK Sbjct: 2 ARIAGVDIPNDKRVVISLTYVYGIGLATSKKILAAAGISEDIRVKDLTSDQEDAIRREVDAIKVEGDLRREVNMNIKRLMEIGSYRGIRHRRGLPVRGQNTKNNARTRKGKAVAIAGKKK 121 The following BLAST results are available for this feature:
BLAST of CK934491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934491 ID=CK934491; Name=CK934491; organism=Citrus sinensis; type=EST; length=716bpback to top |