CK934501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1B_SCHPO (60S ribosomal protein L1-B OS=Schizosaccharomyces pombe GN=rpl1b PE=1 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 2.348e-64 Identity = 120/217 (55.30%), Postives = 161/217 (74.19%), Query Frame = 3 Query: 66 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 716 MSK+ ++R V I++ S+E KKRNFTET+ELQIGLKNYDPQ+DKRFSG++KLP++PRP M +C+LGDA ++ A+ G+D M V+ Y AF+ASE +IKQIPRLLGPGL+KAGKFP+ V+H + L K+ E K+T+KFQLKKVLC+GVAVG++ M E+Q+ N+ ++VNFLVSLLKK WQN+ L +KSTMG +R++ Sbjct: 1 MSKVSVASVRSNVEQILKGSEE-KKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPNMAICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLIANIMLAVNFLVSLLKKGWQNIGSLVVKSTMGKPHRLY 216
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL10A_DICDI (60S ribosomal protein L10a OS=Dictyostelium discoideum GN=rpl10a PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 4.006e-64 Identity = 115/218 (52.75%), Postives = 161/218 (73.85%), Query Frame = 3 Query: 66 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXX-YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 716 MSK+ SD +R VS + + ++E+K R F ET+ELQI LKNYD +KDKRFSG +K+ + +PK+ VC+ D QH +EA KIG ++MD+E Y AFLASES+++Q+P+LLGPGLNK GKFPTL+TH E + SK+N+ K+TVKFQLKKVLC+ VAVG++ + E+++ N+ S+NFLVSLLKK WQN++ LY+K++MGPS+R++ Sbjct: 1 MSKISSDQVRSIVSQLFKEAQESK-RGFLETVELQINLKNYDTKKDKRFSGQIKIGTVTKPKLSVCVFADQQHCDEATKIGAEFMDIEALKKIGPKNKKAIKKLSKKYDAFLASESILRQVPKLLGPGLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREVATNIIQSINFLVSLLKKGWQNIKTLYVKTSMGPSHRVY 217
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1A_SCHPO (60S ribosomal protein L1-A OS=Schizosaccharomyces pombe GN=rpl1a PE=1 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.165e-63 Identity = 119/217 (54.84%), Postives = 161/217 (74.19%), Query Frame = 3 Query: 66 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 716 MSK+ +R +V +I++ S+E KKRNFTET+ELQIGLKNYDPQ+DKRFSG++KLP++PRP M +C+LGDA ++ A+ G+D M V+ Y AF+ASE +IKQIPRLLGPGL+KAGKFP+ V+H + L K+ E K+T+KFQLKKVLC+GVAVG++ M E+Q+ N+ +++NFLVSLLKK WQN+ L +KSTMG R++ Sbjct: 1 MSKVSPANIRSSVETILKGSEE-KKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPNMSICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHSDDLYGKIIEVKSTIKFQLKKVLCLGVAVGHVDMAEEQLAANLSLAINFLVSLLKKGWQNIGSLVIKSTMGKPYRLY 216
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL10A_TRYBR (60S ribosomal protein L10a OS=Trypanosoma brucei rhodesiense GN=RPL10A PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 9.556e-58 Identity = 113/217 (52.07%), Postives = 150/217 (69.12%), Query Frame = 3 Query: 66 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 716 MSK+ L EA+ +++ K+ K+R F E+I+LQ+ LKNYDPQKDKRFSGSV+LPH+ RP+M VC+L D H + A+K + M+ E Y AFL SES+IK +PRL+GP +++ GKFPT+ ESL KV E ++TVKFQLKKVLC+G VG++ M E Q+ QNV M++NFLVSLLKKNWQN++ Y+KSTMG S RI+ Sbjct: 1 MSKIPPALLSEAIQNVL---KDRKERKFKESIDLQVNLKNYDPQKDKRFSGSVRLPHVCRPRMTVCLLCDLVHEDIAKKNDVPTMNQEELKKLNKNKKLVKKMCNQYDAFLCSESIIKTVPRLVGPHMHRVGKFPTVCAQNESLPDKVLELQSTVKFQLKKVLCLGTCVGHVDMTEDQVRQNVVMAINFLVSLLKKNWQNLKSAYIKSTMGKSQRIY 214
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL10A_PIG (60S ribosomal protein L10a (Fragment) OS=Sus scrofa GN=RPL10A PE=2 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 1.750e-43 Identity = 87/164 (53.05%), Postives = 112/164 (68.29%), Query Frame = 3 Query: 69 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCM 560 SK+ D L EAV ++ + + F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC LGD QH +EA+ + + +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH + +KV+E K+ VKFQ+K+VLC+ Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRNXXKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCXLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNXDMVAKVDEVKSRVKFQMKEVLCL 165
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL10A_ENTHI (60S ribosomal protein L10a (Fragment) OS=Entamoeba histolytica GN=RPL10A PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.368e-34 Identity = 76/163 (46.63%), Postives = 102/163 (62.58%), Query Frame = 3 Query: 93 REAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNL 581 R+ V++I+ KE K+R F ET EL + LKNYDP KDKR G+ KLP++ + KVC+LGDAQ E A+K + +MDV+ Y+ FL S+SV +Q+ ++LGPGLNK GKFP + E L+ K+NE + V QLKKVLCMGV GN+ Sbjct: 6 RQGVATIL---KEKKERKFGETGELHLALKNYDPDKDKRCGGTDKLPNVTKANYKVCVLGDAQACEAAQKENIPHMDVDALKALYKDKMFFKKLARKYNTFLGSDSVGRQLQKILGPGLNKGGKFPPPLGKNEDLKVKINELQCQVNSQLKKVLCMGVGGGNV 165
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL10A_CAERE (60S ribosomal protein L10a (Fragment) OS=Caenorhabditis remanei GN=rpl-10a PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.890e-28 Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 213 SGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKK 548 SGS++L HIPRP MKVC+ GD H++EA + M + Y AF+ASES+IKQIPR+LGPGLNKAGKFP++VTH ESL+SK +E +ATVKFQ+KK Sbjct: 1 SGSIRLKHIPRPSMKVCVFGDQHHLDEAAAGNIPAMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKK 112
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_PYRKO (50S ribosomal protein L1P OS=Pyrococcus kodakaraensis GN=rpl1p PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.342e-21 Identity = 59/209 (28.23%), Postives = 109/209 (52.15%), Query Frame = 3 Query: 93 REAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTH-QESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 ++ V ++ + K RNFT+T+E+ + LK+ D +K + RF V LPH + K+ ++ D E A+K+GLD + E Y F+A+ ++ +I R LG L K P +V +LE V + K TV+ QLK + +G M+++++ +N + +N +++ L++ V+ +Y+K+TMGP+ ++ Sbjct: 6 QKLVEAVKEAKARAKPRNFTQTVEMAVNLKDVDLRKPENRFKLEVVLPHGRGKEPKIAVIADGAVAEAAKKLGLDVISGEELEELAKSPRQARKLAKKYDFFIAAAPLMPKIGRYLGRYLGPRNKMPVVVPPTMTNLEPIVEKLKKTVRIQLKNNPVVHAPIGTEDMDDEKLAENAEAVLNAIINKLERGENQVKSVYIKTTMGPAVKV 214
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_PYRHO (50S ribosomal protein L1P OS=Pyrococcus horikoshii GN=rpl1p PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.909e-20 Identity = 60/218 (27.52%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 66 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTH-QESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 MS++ D ++ V ++ + K RNFT+++E+ + LK+ D ++ + RF V LPH +K+ ++ D E A ++GLD + Y F+A ++ +I R LG L K P +V ++E V + K TV+ QLK + VG M ++Q+ +N++ +N ++ L++ +R +Y+K+TMGP+ R+ Sbjct: 1 MSRMAFDR-QKIVEAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARRLGLDVISSAELEEIAKSPRQARKLAKKYDFFIAEAPLMPKIGRYLGRYLGPRNKMPVVVPPTMTNIEPIVEKLKKTVRIQLKDNPVVHAPVGTEKMSDEQLAENIEAVLNAIIGKLERGENQIRSVYVKTTMGPAVRV 217
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_PYRAB (50S ribosomal protein L1P OS=Pyrococcus abyssi GN=rpl1p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.349e-19 Identity = 60/218 (27.52%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 66 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQES-LESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 MS++ D ++ V ++ + K RNFT+++E+ + LK+ D ++ + RF V LPH +K+ ++ D E A ++GLD + Y F+A ++ +I R LG L K P +V S LE V + K TV+ QLK + VG M +++I +N++ +N ++ L++ ++ +Y+K+TMGP+ ++ Sbjct: 1 MSRMPFDR-QKIVEAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARRLGLDVISSAELEEIAQSPRQARKLAKKYDFFIAEAPLMPKIGRYLGKYLGPRNKMPVVVPPTMSNLEPIVEKLKKTVRIQLKNNPVVHAPVGTEKMSDEEIAENIETVLNAIIGKLERGESQIKSVYVKTTMGPAVKV 217 The following BLAST results are available for this feature:
BLAST of CK934501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934501 ID=CK934501; Name=CK934501; organism=Citrus sinensis; type=EST; length=839bpback to top |