CK934501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_PYRFU (50S ribosomal protein L1P OS=Pyrococcus furiosus GN=rpl1p PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18 Identity = 58/209 (27.75%), Postives = 103/209 (49.28%), Query Frame = 3 Query: 93 REAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQ-ESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 ++ V ++ + K RNFT+++E+ + LK+ D ++ + RF V LPH +K+ ++ D E A K+GLD + Y F+A ++ +I R LG L K P +V L V + K TV+ QLK + VG M +++I +N++ +N ++ L++ V+ +Y+K+TMGP+ +I Sbjct: 6 QKIVKAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARKLGLDVISSAELEEIASSPRQARKLAKKYDFFIAEAPLMPKIGRYLGRYLGPRNKMPVVVPPTLTDLTPIVEKLKKTVRIQLKNNPVVHAPVGTEKMSDEEIAENIEAVLNAIIGKLERGESQVKSVYVKTTMGPAVKI 214
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METB6 (50S ribosomal protein L1P OS=Methanoregula boonei (strain 6A8) GN=rpl1p PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17 Identity = 58/208 (27.88%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 96 EAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDY-MDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 EAV++ ++ + KR F+E+I++ I LKN D + K R ++ LP+ K +C++G V +A+ +D + + Y FLA +V+ Q+ R LGP L G+ P + Q + V + +VK + K VG+ +M +Q+ +N+ + + S+L++ NVR +++K+TMGPS R+ Sbjct: 9 EAVTTAIE---KAPKRKFSESIDITINLKNIDMAQPKNRIDETILLPNGTGEKTGICVIGRGDIVTQAKDAKVDLILGPDEVERLGGAPREARRVASSYKYFLAETAVMPQVGRFLGPRLGPRGRMPMPIPGQTDIRPIVERLRNSVKIRTKDKTVFSTKVGSTAMTPEQVSENIDAILKRVESVLEQGHLNVRSVFVKTTMGPSVRL 213
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METHJ (50S ribosomal protein L1P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl1p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.184e-17 Identity = 54/206 (26.21%), Postives = 100/206 (48.54%), Query Frame = 3 Query: 102 VSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDY-MDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 + ++ + ++ +R FTE++++ I LKN D + K R ++ LPH +K+ +LG V +A + G++ M E + FLA V+ + R LGP L G+ P + + V + +VK + K + + VG +M E++I +N+ + ++S L+ VR +Y+K+TMGPS ++ Sbjct: 8 IDALKKAKEQAPERKFTESVDMTINLKNIDMSQPKNRIDETILLPHGNGRVVKIAVLGSGDIVTQARESGVELIMGPEEIERLGGAPREARKIASEHQFFLAETQVMSLVGRWLGPRLGPRGRMPQPIPAGTDIRPIVERLRKSVKIRTKDKMSFSLKVGTTAMSEEEIAENIDAVLKRILSKLEMGDFQVRSVYIKTTMGPSVKV 213
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METKA (50S ribosomal protein L1P OS=Methanopyrus kandleri GN=rpl1p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.062e-16 Identity = 50/215 (23.26%), Postives = 98/215 (45.58%), Query Frame = 3 Query: 75 LQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYD-PQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 716 + + L E + +V+YS R F ET+++ + +K D +R V LPH + VC++ + + EAE+ G ++ E + F A ++ + R+LGP L GK V + + + T + +++ + +G +ME +Q+ +N + + S L+K+W + +Y+K+TMGP+ R++ Sbjct: 3 ITEEDLIEPLRKVVEYSPP---RRFLETVDMIVNVKGVDLSDPSQRIDKEVVLPHGRGKPVNVCVIAEGEMAREAEEAGATVINREKLEELAENVREAKKIARRHEFFYAQVDLMPDVGRVLGPVLGPRGKMAKPVPPNADIRALIERAHRTARVRMRDQPVIHTVIGARNMEPEQLAENAMAVLREITSELEKSWAQIDSVYVKTTMGPAERVY 214
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_UNCMA (50S ribosomal protein L1P OS=Uncultured methanogenic archaeon RC-I GN=rpl1p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.305e-16 Identity = 56/211 (26.54%), Postives = 98/211 (46.45%), Query Frame = 3 Query: 87 ALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 A +E V ++ + KRNF+E+++L I LKN D + K R + LP +KV + + AEK G DY+ E + F+A + + I + LG L GK P + Q + + + K ++K + K L +G +M ++I +N+ + L + L+K QN+ +Y+K+TMGP+ ++ Sbjct: 2 ARKETVEAVKKALASRPKRNFSESVDLAINLKNIDMSQPKNRVDEDIILPSGLGKTIKVAVFAKGEVAVNAEKAGADYVFPPEEIEKLGADKPRAKKLASEVNFFIAETAYMPTIGKRLGTVLGPRGKMPAPLPPQADVTALITRQKKSIKIRSKDRLTFHATIGTETMTPEEIAENIDAIIKRLETKLEKGKQNIHAIYVKTTMGPAVKV 212
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METST (50S ribosomal protein L1P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl1p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.543e-15 Identity = 54/213 (25.35%), Postives = 104/213 (48.83%), Query Frame = 3 Query: 81 SDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 + + EAV +++ E+K RNFT++I++ I + + D K + R V LP+ +K+ + + + +AE+ G D + + E Y F+A ++ + R LGP L K P + + E+ + ++T+K ++K + VG+ M E Q+ +N+ ++ L L+K + ++ +YLK+TMGP R+ Sbjct: 2 TQVIEEAVKKVLE---ESKPRNFTQSIDVVITINDLDINKPENRLDEEVLLPNGRGKDVKIAFIAEGELAYQAEQAGADLVINKEKLEELGKNRPEAKKLANSYDFFVAQTDLMPTVGRFLGPVLGPRKKMPKPIPASANPETILGRLRSTIKIRVKDQPIIQSIVGSEDMTEAQVAENIDAIMDVLDRNLEKGSKQIKAMYLKTTMGPVTRV 211
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METJA (50S ribosomal protein L1P OS=Methanocaldococcus jannaschii GN=rpl1p PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.543e-15 Identity = 57/209 (27.27%), Postives = 97/209 (46.41%), Query Frame = 3 Query: 93 REAVSSIVQYSKE-TKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 REA+ V+ ++E K RNFT++ E LK D +K + R V LPH + K+ ++G ++AE++GL + E + F+A ++ I R +G L GK P V +++ V K TV + V VGN M ++QI N++ +N + +K +++ Y+K TMGP+ ++ Sbjct: 3 REALLQAVKEARELAKPRNFTQSFEFIATLKEIDMRKPENRIKTEVVLPHGRGKEAKIAVIGTGDLAKQAEELGLTVIRKEEIEELGKNKRKLRKIAKAHDFFIAQADLMPLIGRYMGVILGPRGKMPKPVPANANIKPLVERLKKTVVINTRDKPYFQVLVGNEKMTDEQIVDNIEAVLNVVAKKYEKGLYHIKDAYVKLTMGPAVKV 211
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METLZ (50S ribosomal protein L1P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl1p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.307e-14 Identity = 55/208 (26.44%), Postives = 98/208 (47.12%), Query Frame = 3 Query: 96 EAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 + ++++ + +R F E+I++ I LK+ D + K R ++ LP K K+ +LG V +A G+D + + Y FLA +V+ + R LG L GK P + + + V + +VK + K L M V VGN M +++ +N+ V +V L+ N+R +Y+K+TMGP+ ++ Sbjct: 6 QIINAVTAAITQAPERKFQESIDITINLKHVDMAQPKNRIDETILLPQAIGVK-KIAVLGKGDIVSQARNAGVDLIIGPDEIERLGGVPREARKMAGQYDFFLAETAVMPLVGRWLGQRLGPRGKMPQPIPPTQDITPIVERLRNSVKIRSKDRLNMSVKVGNTGMTVEEVSENIDAVVKRVVGRLESGELNIRSVYVKTTMGPAVKV 212
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_NANEQ (50S ribosomal protein L1P OS=Nanoarchaeum equitans GN=rpl1p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.229e-14 Identity = 64/211 (30.33%), Postives = 96/211 (45.50%), Query Frame = 3 Query: 114 VQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQ-----------ESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 V+ ++E KKR FT+T EL LKN D +K R S + LP KM + + ++ E AEK D + YH ++ + + LLG L GK P Q E+L K+N T V+ +KK + GV +G ME++ I +N +N ++S L + QN+ +YLK TMGP+ R+ Sbjct: 7 VKKAREGKKRRFTQTFELIFNLKNVDLRK-YRLSTYIVLPRGRGKKMPILAIVGPENKELAEKY-FDIVLTREDLKQLDKRTAKKLAKRHYHVVAQADLMPELGKSLLGRFLGIRGKMPNPKAGQILPPNLNEKMLEALREKLNNT---VRVNVKKHVTFGVPIGTEDMEDEAIAENADTVINEIISQLPQGKQNIDSVYLKLTMGPAVRV 212
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METTP (50S ribosomal protein L1P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl1p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.802e-14 Identity = 56/210 (26.67%), Postives = 92/210 (43.81%), Query Frame = 3 Query: 90 LREAVSSIVQYSKETKKRNFTETIELQIGLKNYD-PQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 + EAV V E R F E+++L I L N D Q R V LPH ++ + +A+ G DY+ E Y F+A + I + LGP L K GK PT + + ++ K V+ + + +AVG M+ +Q+ +N++ + L LK +N++ +Y+K+TMGP+ R+ Sbjct: 5 IEEAVKKAVS---EAPPRGFKESVDLAINLHNIDLTQPGNRVDTEVILPHGRGRPNRIAVFAAGDTALKAKAAGADYVISPEELKLLGENRKNARKLADEYDFFIAETQFMPVIGKTLGPILGKRGKMPTPLPPNADVAQMISRLKNIVRIRSRDRPTFHIAVGRRDMDARQLAENIESVITKLEQTLKDGRRNLKSVYVKTTMGPAVRV 211 The following BLAST results are available for this feature:
BLAST of CK934501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934501 ID=CK934501; Name=CK934501; organism=Citrus sinensis; type=EST; length=839bpback to top |