CK934501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METMJ (50S ribosomal protein L1P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl1p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 53/211 (25.12%), Postives = 102/211 (48.34%), Query Frame = 3 Query: 87 ALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 +++EAV + + + E R F E++++ + L+N D + K R ++ LP+ +K+ +LG V +A+++ +D + E Y FLA +++ + R LG L G+ P V + V +++VK + K VG ME +QI +N+ ++ + S+L+ N+ +Y+K+TMGP+ R+ Sbjct: 6 SIQEAVKTALSKAPE---RKFKESVDITVNLRNIDMSQPKNRIDETIHLPN-GFDNVKIAVLGKGDIVTQAKEVNVDLIIGPEEIERLGGEPREARKVAGEYRFFLAETAMMPLVGRYLGVRLGPRGRMPMPVPQGMDIRPIVQRLRSSVKIRTKDKKVFHTKVGTSGMEPEQIAENIDAVLHRVESVLESGTMNIHSVYVKTTMGPAVRV 212
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METS3 (50S ribosomal protein L1P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl1p PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.106e-13 Identity = 47/212 (22.17%), Postives = 107/212 (50.47%), Query Frame = 3 Query: 93 REAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIG----LDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 +E + ++ + +++K RNFT+++++ + +++ D +K + RF+ V LP+ ++K+ ++ D + + +A+ G ++ D+E F+A ++ + R LGP L K P V L+ + ++TVK +K+ + + VG+ M ++ + +N++ + L L K ++ +++K+TMGP R+ Sbjct: 3 QEVLEAVKEAKEQSKPRNFTQSVDMIVNIRDLDVKKPENRFNEEVTLPNGRGKEVKIGVIADGELIVQAKDAGVALVINKADLEELGKDRKAAKKAANSVDF---FIAQADMMPLVGRFLGPILGPRNKMPKPVPASIKLDPLLERLQSTVKVGIKQQPAIQIIVGSQDMSDEDLAENIETVLTVLDRHLDKGRNQIKSMFIKTTMGPIVRV 211
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_NATPD (50S ribosomal protein L1P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl1p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.887e-13 Identity = 56/209 (26.79%), Postives = 94/209 (44.98%), Query Frame = 3 Query: 81 SDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYD-PQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPS 704 +D++ +AVS + S E RNF ET++L I L++ D + R S+ LP + + + + AE + D +D + F+A +++ I R LG L GK PT + + + VN K TV+ + + VG M+ I NV + + L + L+K QN+ +Y+K+TMGP+ Sbjct: 2 ADSIEDAVSRAMSESPE---RNFRETVDLAINLRDLDLADPNNRVDESIVLPSGTGQDTHIVVFAEGETALRAEDVADDVLDSDDLEDLGDDDNAAKDLADETDFFIAEADLMQDIGRYLGTVLGPRGKMPTPLQPDDDVVETVNRMKNTVQVRSGERRTFHTRVGAEDMDADAIADNVDVILRRLFTDLEKGPQNIDTVYVKTTMGPA 207
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METTH (50S ribosomal protein L1P OS=Methanobacterium thermoautotrophicum GN=rpl1p PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.887e-13 Identity = 49/211 (23.22%), Postives = 105/211 (49.76%), Query Frame = 3 Query: 90 LREAVSSIVQYSKE-TKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXX-YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 +++ + V+ +KE ++ RNFT+++++ + +K+ D K + RF V LP+ +K+ ++ D + +A+ G D + + Y F+A ++ + R +GP L K P V + E +N+ + TVK ++K + VG M+++++ +N++ + + L+K ++ +Y+K+TMGP R+ Sbjct: 1 MQQEIMEAVKKAKELSRPRNFTQSMDVILNIKDLDVNKPENRFDEEVSLPNGRGKDVKIAVIADGELALQAKNAGADLVITKDELEELGKNRKEAKKLANQYEFFVAQADMMPLVGRFMGPVLGPRKKMPKPVPATINPEPILNKLRDTVKVRIKDQPVVHTVVGTEDMDDEKLAENIEAVLQTIDRKLEKGRNQLKSMYVKTTMGPVVRV 211
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METTL (50S ribosomal protein L1P OS=Methanococcus thermolithotrophicus GN=rpl1p PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.490e-13 Identity = 53/209 (25.36%), Postives = 94/209 (44.98%), Query Frame = 3 Query: 93 REAVSSIVQYSKE-TKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 RE + V+ ++ K RNFT++++L I LK D + + R V LP+ + K+ ++ +AE++GL + + + F+A ++ + + LGP L GK P V +L V K TV + V VGN M ++++ +N++ +N + +K +V+ Y K TMGP +I Sbjct: 3 RENILKAVKEARSLAKPRNFTQSLDLIINLKELDLSRPENRLKEQVVLPNGRGKEPKIAVIAKGDLAAQAEEMGLTVIRQDELEELGKNKKMAKKIANEHDFFIAQADMMPLVGKTLGPVLGPRGKMPQPVPANANLTPLVERLKKTVLINTRDKPLFHVLVGNEKMSDEELAENIEAILNTVSRKYEKGLYHVKSAYTKLTMGPPAQI 211
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METBU (50S ribosomal protein L1P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl1p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.170e-13 Identity = 52/203 (25.62%), Postives = 96/203 (47.29%), Query Frame = 3 Query: 111 IVQYSKETKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDY-MDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 + Q + + +R F+E++++ I LKN D + K R + LP+ MK+ + + A+ G DY + E F+A + QI + LG L GK P +T +++ +N TK +V+ + K L V+VG M+ +++ +N++ + L L+K N++ +Y+ +TMG S R+ Sbjct: 10 VKQLIEGSPERKFSESLDIAINLKNLDMSQPKNRVDEEIILPNGLGKTMKIAVFAKGEVGLNAKDAGCDYILTEEDIKELGEDKSKARSLANECDFFIAEVQYMAQIGKALGAILGPRGKMPVPLTPDKNVADLINSTKNSVRIRSKDKLTFHVSVGRRDMDVEKLAENIETVLGRLEHSLEKGKHNLKSVYVTTTMGNSVRL 212
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_CENSY (50S ribosomal protein L1P OS=Cenarchaeum symbiosum GN=rpl1p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.170e-13 Identity = 50/200 (25.00%), Postives = 94/200 (47.00%), Query Frame = 3 Query: 102 VSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG 698 V+ +++ +KE KRNFT+T+E + K+ D +K + +V+LP P VC+L A+ D + D +G Y FLA ++ + ++LG L GK PT V +ES + +++V+ + + L + +G+ +M++ + N + L + +NVR + +K++MG Sbjct: 7 VARMIKKAKEGDKRNFTQTLEFIMVFKDIDIKKGFAINETVQLPKTSSPST-VCVLASGDMGVRAKNAKADMVVDADGLEKLGTNKRESRKFINRYDFFLADTQLMPVVGKVLGQILGPRGKMPTPVAFNAPIESFLERFRSSVRVRARASLSLSCKIGDETMDDADLVANAMAVYGTVEKKLPQGSKNVRQIMVKTSMG 205
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METAC (50S ribosomal protein L1P OS=Methanosarcina acetivorans GN=rpl1p PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.597e-12 Identity = 59/209 (28.23%), Postives = 96/209 (45.93%), Query Frame = 3 Query: 96 EAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM--DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 EAV +V+ E+ KRNF+E+++L I LKN D + K R V LPH ++K+ + +A+ G Y+ DVE F+A + I + LG L GK P + + + + + VK + K L VAVG M + + +N++ ++ L +L K N+R +Y+ +TMG S R+ Sbjct: 8 EAVKKVVE---ESPKRNFSESVDLAINLKNLDMNQPKNRVDEEVILPHGLGKELKIGVFAKGDVGLKAKAAGAAYVISDVE-LEELAADKNRARVLANECDLFIAETQFMPIIGKNLGIVLGPRGKMPIPLMPNKDVGELIQSKQNAVKLRSKDRLTFHVAVGRRDMNPEDLAENIETIMSRLERVLDKGKHNLRTVYVTTTMGKSERV 212
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_METMA (50S ribosomal protein L1P OS=Methanosarcina mazei GN=rpl1p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.725e-12 Identity = 58/209 (27.75%), Postives = 95/209 (45.45%), Query Frame = 3 Query: 96 EAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYM--DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRI 713 EAV +++ E+ KRNF+E+++L I LKN D + K R V LPH ++K+ + A+ G Y+ DVE F+A + I + LG L GK P + + + + + VK + K L VAVG +M + +N++ ++ L +L K N+R +Y+ +TMG S R+ Sbjct: 8 EAVKKVIE---ESPKRNFSESVDLAINLKNLDMNQPKNRVDEEVILPHGLGKELKIGVFAKGDVGLRAKAAGAAYVISDVE-LEELAADKNKARVLANECDLFIAETQFMPIIGKNLGIVLGPRGKMPIPLMPNKDIGELIQSKQNAVKLRSKDRLTFHVAVGRRNMNPDDLSENIETIMSRLERVLDKGKHNLRSVYVTTTMGKSERV 212
BLAST of CK934501 vs. ExPASy Swiss-Prot
Match: RL1_THEAC (50S ribosomal protein L1P OS=Thermoplasma acidophilum GN=rpl1p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.558e-12 Identity = 50/204 (24.51%), Postives = 91/204 (44.61%), Query Frame = 3 Query: 90 LREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDK-RFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG 698 ++ AVS I + S + R F E++E+ + LK+ D K R + + LP+ +K+ + G + +A + E + F+A +++ I + LG L GK P + + + K TVK + + L V VG SM+ +I +N+ +N + L++ N+R +Y+K+TMG Sbjct: 6 VKRAVSEIKEKSPQ---RKFEESVEIAVNLKDVDMSNPKNRINEEILLPNGRGKDVKIAVFGSDELKSKARGVADFVFGAEDISKFAEDKKAFKKIVNQAYFFIAEATLMANIGKSLGQVLGPRGKMPRPIPPGQDPAPLIKNLKNTVKARSRNALTFHVPVGTRSMDADKISENIMTVINRITGKLERGASNIRSIYVKTTMG 206 The following BLAST results are available for this feature:
BLAST of CK934501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934501 ID=CK934501; Name=CK934501; organism=Citrus sinensis; type=EST; length=839bpback to top |