CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RHLE_ECOLI (ATP-dependent RNA helicase rhlE OS=Escherichia coli (strain K12) GN=rhlE PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 586 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 +F + L ++ + Y +PTP+Q+ AIP + GRDLMA AQTG+GKTA F P++ ++ Q +G R V ALIL PTREL++QI Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQ--PHAKGRRPV--RALILTPTRELAAQI 91
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP2_ENCCU (ATP-dependent RNA helicase DBP2 OS=Encephalitozoon cuniculi GN=DBP2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 559 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 G NVP P+ F E E+ ++ + +PT +Q P++++GRD++ AQTGSGKT +F P + +Q ++R G P+ L+LAPTREL QI Sbjct: 79 GTNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDG-----PIVLVLAPTRELVMQI 176
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DB10_NICSY (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12 Identity = 38/111 (34.23%), Postives = 63/111 (56.76%), Query Frame = 1 Query: 547 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA 879 + +G +VP P+ +F E+ + + + PTP+Q + PI++ GRD++A A+TGSGKT + P ++Q+ R + P L+L+PTREL++QI EA Sbjct: 133 ISVTGGDVPAPLTSFEATGFPSEIVREMHQAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLMPAFI------HLQQRRKNPQLGPTILVLSPTRELATQIQAEA 237
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RRP3_NEUCR (ATP-dependent rRNA helicase rrp-3 OS=Neurospora crassa GN=rrp-3 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 1 Query: 478 DAEQPFAEAENTGINFDAYEDIPVETSGEN--VPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPL-ALILAPTRELSSQI 867 DA +P AE N + + ++ + E V TF ++ + + L R Y PTP+Q +IP+++ RD++ A+TGSGKTAAF PI+ ++ +P PL AL+LAPTREL++QI Sbjct: 54 DAPEP-AEESTPATNSTEEDSVTLDVAPEQEEVETVKKTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFALPILQALL-----DKPA------PLFALVLAPTRELAAQI 174
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: PRP5_USTMA (Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago maydis GN=PRP5 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = 1 Query: 547 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 + G + P P+ ++ L I+R Y PTP+Q A+P ++GRD++ A+TGSGKT AF P+ I ++ V+ G P+ +I+ PTREL+ QI+ E Sbjct: 464 ITVRGRDCPKPLTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEG-----PVGIIMTPTRELAVQIYRE 568
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: PRP11_SCHPO (Pre-mRNA-processing ATP-dependent RNA helicase prp11 OS=Schizosaccharomyces pombe GN=prp11 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 40/110 (36.36%), Postives = 62/110 (56.36%), Query Frame = 1 Query: 547 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 ++ G + P PV ++++ L + I Y KPT +Q AIP +GRD++ A+TGSGKT AF P+ I ++ ++ G P+A+I+ PTREL+ QI E Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEG-----PIAIIMTPTRELAVQIFRE 510
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: MAK5_LODEL (ATP-dependent RNA helicase MAK5 OS=Lodderomyces elongisporus GN=MAK5 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 51/160 (31.87%), Postives = 76/160 (47.50%), Query Frame = 1 Query: 451 EVNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRC------------KYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQ-------RPRGARTVYPLALILAPTRELSSQIHD 873 E FGDDI E+ ++ +N D + N+ P+ EIDL E I C K+ PTP+Q+ IP+++ G+D++ A TGSGKT A+ PI+ E+Y+Q + R +P +I APTREL+ Q+ D Sbjct: 163 EFTGFGDDIAKEEKDSDGAKKKLNSSEDIDELKYNAFANLDLPLPNDDEIDLPEWGEDKIETCLSPYILNGLSNMKFTTPTPIQKRTIPLALEGKDVIGKATTGSGKTLAYGIPIL-----EKYIQSLDTVKRKVREKVVNHPTGIIFAPTRELAHQVVD 317
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP9_MAGGR (ATP-dependent RNA helicase DBP9 OS=Magnaporthe grisea GN=DBP9 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 1 Query: 583 NTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 ++FA++ L L + + + KPT VQ AIP+++ GRD++A A+TGSGKTAA+ PI+ +++ + + Y +LIL PTREL+ Q+ E Sbjct: 43 SSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPILQAVLKRKQI----NPGATYISSLILVPTRELTVQVTKE 136
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP9_ASPFU (ATP-dependent RNA helicase dbp9 OS=Aspergillus fumigatus GN=dbp9 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 F ++L L + + ++ KPTPVQ AIP+++ G+D++A A+TGSGKTAA+ PI+ I++++ A T LIL PTREL+ Q+ Sbjct: 59 FESLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPILQTILQKKAADPSLKATT----GLILVPTRELAEQV 147
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP9_ASPCL (ATP-dependent RNA helicase dbp9 OS=Aspergillus clavatus GN=dbp9 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12 Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 867 F ++L L + + ++ KPTPVQ AIP+++ G+D++A A+TGSGKTAA+ PI+ I++++ A T LIL PTREL+ Q+ Sbjct: 29 FENLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPILQTILQKKAADPSLKATT----GLILVPTRELAEQV 117 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |