CK934523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: PRP28_KLULA (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Kluyveromyces lactis GN=PRP28 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.995e-12 Identity = 47/119 (39.50%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 535 EDIPVETSGENVPPPVNTFAEIDLGEE--LNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPI---ISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 ED + + G V P+ + E+ L E LN+ Y +PT +QR IP + RD + A TGSGKT AF PI + GI + + G PLAL+LAPTREL+ QI E Sbjct: 120 EDFNISSKGGTVEKPLRNWHELKLIPEDLLNIITNDLHYNEPTSIQRSTIPNVINNRDFIGVASTGSGKTLAFLLPILIKLHGIPPLNSITKHDG-----PLALVLAPTRELAQQIQHE 233
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: GLH4_CAEEL (ATP-dependent RNA helicase glh-4 OS=Caenorhabditis elegans GN=glh-4 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.995e-12 Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = 1 Query: 484 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 864 ++ F +A N D + + T +P + L ++L+ N++R K +PTP+QR + + G D++ACA TGSGKT AF P + +M E R P LI+APTREL +Q Sbjct: 703 DKMFEDAVNNDDKIDFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DDX41_MOUSE (Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.995e-12 Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 559 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 870 G+ +PPP+ +F E+ + +++ + PTP+Q IP ++GRD++ A TGSGKT F P+I + ++ +R ++ P LI+ P+REL+ Q H Sbjct: 173 GDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE--KRLPFSKREGPYGLIICPSRELARQTH 274
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP3_ASHGO (ATP-dependent RNA helicase DBP3 OS=Ashbya gossypii GN=DBP3 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.995e-12 Identity = 40/99 (40.40%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 577 PVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 P+ +F+ ++L + I K+ KPTP+Q + P +AG+D++ A+TGSGKT AF P I+ +M E+ PRG + L+++PTREL+SQI+D Sbjct: 123 PLLSFSHLNLHSAIQKEIS--KFPKPTPIQAVSWPYLLAGKDVIGVAETGSGKTFAFGVPAINSLMSEK--STPRGVK-----CLVISPTRELASQIYD 212
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP2_MAGGR (ATP-dependent RNA helicase DBP2 OS=Magnaporthe grisea GN=DBP2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.995e-12 Identity = 40/106 (37.74%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 559 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDE 876 G +VP PV TF E + ++ + PT +Q P++++GRD++ A+TGSGKT +C P I I + + G P+ LILAPTREL+ QI E Sbjct: 117 GSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDG-----PIVLILAPTRELAVQIQAE 217
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: RRP3_CHAGB (ATP-dependent rRNA helicase RRP3 OS=Chaetomium globosum GN=RRP3 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.523e-12 Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = 1 Query: 520 NFDAYEDIPVETSGENVPPPV-NTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPL-ALILAPTRELSSQI 867 N +A + + SGE P TF ++ + + L + + KPTP+Q+ +IP+++ RD++ A+TGSGKT AF PI+ ++ +P+ PL AL+LAPTREL++QI Sbjct: 43 NSEAESETIDDASGEESEEPAPKTFQDLGIVDSLCDACKELGWKKPTPIQQESIPLALQDRDIIGLAETGSGKTGAFALPILQALL-----DKPQ------PLFALVLAPTRELAAQI 149
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: MAK5_MAGGR (ATP-dependent RNA helicase MAK5 OS=Magnaporthe grisea GN=MAK5 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.523e-12 Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 1 Query: 580 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS---GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 V+ + + L EE+ +I + K+ KPT +Q IP +AG D++ A TGSGKT AF PI+ I +R T P+AL+L+PTREL+ Q+ D Sbjct: 211 VSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPEILAGHDVVGKASTGSGKTLAFGIPIVEKWLSINASTQSKRVAEGETKTPIALVLSPTRELAHQLTD 311
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: MAK5_GIBZE (ATP-dependent RNA helicase MAK5 OS=Gibberella zeae GN=MAK5 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.523e-12 Identity = 36/95 (37.89%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 589 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 + ++L ++ I + K++KPT +Q+ IP VAG D++ AQTGSGKT AF P++ + Q +G + P++L+L+PTREL+ Q+ D Sbjct: 217 WVSLNLSPQIISAIAKLKFMKPTKIQKRTIPEIVAGHDVIGKAQTGSGKTLAFGIPMVERWLEMQ----EQGVKRTGPMSLVLSPTRELAKQLGD 307
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DRS1_DEBHA (ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii GN=DRS1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.523e-12 Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 472 DIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVN-----TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 D+D E P ++ E+ D ED+ + E TF + L + + + Y KP+P+Q IPI++ G+D++A A TGSGKTAA+ PII E+ + +P A+ ++LAPTREL+ Q+ D Sbjct: 216 DMDEEYPGSDQEDEKPVEDTAEDMAEFYADEEEATTAKKQLHTTFQSLQLSRPVLKGLSQLGYTKPSPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPII-----ERLLYKP--AKISSTRVIVLAPTRELAIQVCD 347
BLAST of CK934523 vs. ExPASy Swiss-Prot
Match: DBP3_YEAST (ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae GN=DBP3 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.523e-12 Identity = 44/112 (39.29%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 538 DIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 873 +I VE S + P+ +F + L + I K+ KPTP+Q A P ++G+D++ A+TGSGKT AF P IS +M + Q+ RG + L+++PTREL+SQI+D Sbjct: 99 EIAVEDSLDLALRPLLSFDYLSLDSSIQAEIS--KFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMND---QKKRGIQ-----VLVISPTRELASQIYD 200 The following BLAST results are available for this feature:
BLAST of CK934523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934523 ID=CK934523; Name=CK934523; organism=Citrus sinensis; type=EST; length=879bpback to top |