CK934526

Overview
NameCK934526
Unique NameCK934526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_VIBFM (L-threonine 3-dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=tdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 71/197 (36.04%), Postives = 109/197 (55.33%), Query Frame = 1
Query:  226 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            E P +G  D+L+R+K   ICG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G+ +  +V PA   FK+P  +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +AK++G    V
Sbjct:   21 EKPEMGHNDLLIRIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNRT-GAFSEYLVIPAFNAFKIPAGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLAKKMGVTRAV 215          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_VIBF1 (L-threonine 3-dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=tdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 71/197 (36.04%), Postives = 109/197 (55.33%), Query Frame = 1
Query:  226 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            E P +G  D+L+R+K   ICG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G+ +  +V PA   FK+P  +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +AK++G    V
Sbjct:   21 EKPEMGHNDLLIRIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNRT-GAFSEYLVIPAFNAFKIPAGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLAKKMGVTRAV 215          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_SHEB9 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS195) GN=tdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 70/195 (35.90%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P +G  D+L+++K   ICG+D+H       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC            GS A  +V PA   FK+PD++S +  ++ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V
Sbjct:   21 PVMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_SHEB8 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS185) GN=tdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 70/195 (35.90%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P +G  D+L+++K   ICG+D+H       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC            GS A  +V PA   FK+PD++S +  ++ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V
Sbjct:   21 PVMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_SHEB5 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 70/195 (35.90%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P +G  D+L+++K   ICG+D+H       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC            GS A  +V PA   FK+PD++S +  ++ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V
Sbjct:   21 PVMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_SHEB2 (L-threonine 3-dehydrogenase OS=Shewanella baltica (strain OS223) GN=tdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 70/195 (35.90%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P +G  D+L+++K   ICG+D+H       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC            GS A  +V PA   FK+PD++S +  ++ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V
Sbjct:   21 PVMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-EGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_SALAR (L-threonine 3-dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=tdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 70/195 (35.90%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P +G  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNR-PGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGVMAAAVAKHVGARHVVITDVNEYRLELARKMGVTRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_RHIE6 (L-threonine 3-dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=tdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 74/204 (36.27%), Postives = 117/204 (57.35%), Query Frame = 1
Query:  208 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            L ++   +P +GP DVL+R+K   ICG+DVH     + A   +  PMV+GHE +G I ++GS V     G+RV+ E  I C +C +C+ GR +LC   +      P  GS    V  P      +PD++S E  A+ +P    +H     ++  E +VL+ GAGPIG++  L A+  GA ++VI D++ +RL +A++LG D++V
Sbjct:   17 LWMEDVPVPEVGPNDVLIRVKKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFSGEIAEIGSAVTRYHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFGEFVCIPESNVVPIPDDISDEIAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGIMGALVAKRSGARKVVITDINPHRLDLARKLGIDHVV 217          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_MARMS (L-threonine 3-dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=tdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 73/195 (37.44%), Postives = 108/195 (55.38%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P  G  DV++++    ICG+D+H  +    A   +  PM +GHE  GVI +VG EV     GDRV+ E  I+C  C +C+ GR +LC +          G+ A  +V PA   FK+P+N+S +  A+ +P     H     ++  E +VLI GAGPIG +    A+  GA  +VI DV+D+RL +AK++GA   V
Sbjct:   21 PDCGHNDVVIKISKTAICGTDMHIYQWDDWAQNTIPVPMTVGHEFVGVITEVGPEVSGFKIGDRVSGEGHITCGHCRNCRAGRRHLCRKTLGVGVNRT-GAFAEYLVIPASNAFKIPNNISDDMAAIFDPFGNATHTALSFDLIGE-DVLITGAGPIGAMAAAIAKHVGARNVVITDVNDFRLDLAKKMGATRTV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_ESCF3 (L-threonine 3-dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29
Identity = 72/196 (36.73%), Postives = 110/196 (56.12%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P LG  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+ GR +LC   I      P  G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V
Sbjct:   21 PELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAV 213          
The following BLAST results are available for this feature:
BLAST of CK934526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
TDH_VIBFM5.264e-2936.04L-threonine 3-dehydrogenase OS=Vibrio fischeri (st... [more]
TDH_VIBF15.264e-2936.04L-threonine 3-dehydrogenase OS=Vibrio fischeri (st... [more]
TDH_SHEB95.264e-2935.90L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_SHEB85.264e-2935.90L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_SHEB55.264e-2935.90L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_SHEB25.264e-2935.90L-threonine 3-dehydrogenase OS=Shewanella baltica ... [more]
TDH_SALAR5.264e-2935.90L-threonine 3-dehydrogenase OS=Salmonella arizonae... [more]
TDH_RHIE65.264e-2936.27L-threonine 3-dehydrogenase OS=Rhizobium etli (str... [more]
TDH_MARMS5.264e-2937.44L-threonine 3-dehydrogenase OS=Marinomonas sp. (st... [more]
TDH_ESCF35.264e-2936.73L-threonine 3-dehydrogenase OS=Escherichia ferguso... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_A12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934526 ID=CK934526; Name=CK934526; organism=Citrus sinensis; type=EST; length=819bp
GCGGGGGCGGCCNNNTCAAATCATATCCCATANNNAGAATCAGAATAAAT
GGTAGCTTAAAATGTTGTGTACAGAGTGAAGTCTCTTCTGTGCACTTGTG
TTTTTGAAGGGTAAAAAGCAAATATGGGCAAAGGAGGGATGTCACAAGGA
GAAAAGAAGGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTGT
CAACACCCTCAAGATTCAACCTTTTGAGCTTCCTTCTCTGGGACCATATG
ATGTTTTAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGATGTGCAT
TATCTCAAGACCTTGAGGTGTGCCGATTTTGTTGTGAAAGAGCCTATGGT
GATTGGGCACGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGA
AGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCCGGGATCAGCTGC
TGGCGATGCGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGAT
AAAATTTTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATCAGGTGG
TGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAG
GAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCG
TGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCA
TAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATT
GTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGG
TGCAGATAATATTGTTAAA
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