CK934526

Overview
NameCK934526
Unique NameCK934526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_CHRVO (L-threonine 3-dehydrogenase OS=Chromobacterium violaceum GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.173e-28
Identity = 72/203 (35.47%), Postives = 113/203 (55.67%), Query Frame = 1
Query:  208 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            L++    LP +G  D+L+++    ICG+D+H       +   +  PM +GHE  GV+  +GSEV+    G RV+ E  I+C  C +C+ GR +LC            G+ A  +V PA   F +PD++S +  ++ +P    +H     N+  E +VLI GAGPIG++ +  A+  GA  +VI DV+DYRL +AK++GA   V
Sbjct:   13 LEMTDVPLPEVGHNDLLIKIVKTAICGTDIHIWNWDEWSQKTIPVPMHVGHEYVGVVAGMGSEVQGFKIGQRVSGEGHITCGYCRNCRAGRRHLCRNTTGVGVNR-EGAFAEYLVIPAFNAFPIPDDISDDLASIFDPFGNAVHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARHVVITDVNDYRLELAKKMGATRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_ALTMD (L-threonine 3-dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=tdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.173e-28
Identity = 69/201 (34.33%), Postives = 112/201 (55.72%), Query Frame = 1
Query:  214 IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            +Q    P +G  D+L++++   ICG+D+H       +   +  P+V+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+ GR +LC   +        G+ A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +V+ D++ YRL +AK++GA   V
Sbjct:   15 LQDTPKPEVGHNDLLIKIRKTAICGTDMHIYNWDEWSQNTIPVPVVVGHEYVGEVVGMGQEVKGFEVGDRVSGEGHITCGHCRNCRAGRVHLCRNTEGVGVNR-PGAFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVVTDINPYRLELAKKMGATRTV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_VIBSL (L-threonine 3-dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=tdh PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.532e-28
Identity = 70/197 (35.53%), Postives = 109/197 (55.33%), Query Frame = 1
Query:  226 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            E P +G  D+L+R+K   ICG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G+ +  +V PA   FK+P  +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V
Sbjct:   21 EKPEMGHNDLLIRIKKTAICGTDVHIYNWDEWSQNTIPVPMVVGHEYVGEVVGIGQEVRGFEIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNRT-GAFSEFLVIPAFNAFKIPAEISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLARQMGVTRAV 215          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_SHESH (L-threonine 3-dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=tdh PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.532e-28
Identity = 69/195 (35.38%), Postives = 109/195 (55.90%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P +G  D+L++++   ICG+D+H       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G+ A  +V PA   FK+PD++S +  ++ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A ++GA   V
Sbjct:   21 PEMGHNDLLIKIRKTAICGTDIHIYNWDEWSQKTIPVPMVVGHEYVGEVIDMGIEVRGFDVGDRVSGEGHITCGHCRNCRGGRTHLCRNTSGVGVNR-DGAFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELANKMGATRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_PHOPR (L-threonine 3-dehydrogenase OS=Photobacterium profundum GN=tdh PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.532e-28
Identity = 70/195 (35.90%), Postives = 108/195 (55.38%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P +G  D+L+R+K   ICG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+GGR +LC            G+ A  +V PA   FK+P  +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V
Sbjct:   23 PEMGHNDLLIRIKKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFTIGDRVSGEGHITCGHCRNCRGGRTHLCRNTTGVGVNR-DGAFAEFLVIPAFNAFKIPAGISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLDLARKMGVTRAV 215          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_BURP8 (L-threonine 3-dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=tdh PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.532e-28
Identity = 73/195 (37.44%), Postives = 108/195 (55.38%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P +G  DV++R+    ICG+D+H  K    A   +  PM +GHE  G I ++G EV+    GDRV+ E  I+C  C +C+ GR +LC            G+ A  +V PA   FK+P  +S +  A+ +P     H     N+  E +VLI GAGPIG++ +  A+  GA  +VI DV+DYRL +A+++GA   V
Sbjct:   21 PEVGHNDVMIRITRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFSIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGE-DVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLELARKMGATRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_KLEP7 (L-threonine 3-dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=tdh PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28
Identity = 70/196 (35.71%), Postives = 110/196 (56.12%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P +G  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC   I      P  G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGVMAAAVAKHVGARNVVITDVNEYRLELARKMGVTRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_KLEP3 (L-threonine 3-dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=tdh PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28
Identity = 70/196 (35.71%), Postives = 110/196 (56.12%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P +G  D+L++++   ICG+DVH       +   +  PMV+GHE  G +  +G EV+    GDRV+ E  I+C  C +C+ GR +LC   I      P  G  A  +V PA   FK+PDN+S +  ++ +P    +H     ++  E +VL+ GAGPIG++    A+  GA  +VI DV++YRL +A+++G    V
Sbjct:   21 PEVGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRP--GCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGVMAAAVAKHVGARNVVITDVNEYRLELARKMGVTRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_XANOR (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=tdh PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.412e-28
Identity = 72/216 (33.33%), Postives = 112/216 (51.85%), Query Frame = 1
Query:  169 EVNMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            E N   WL  V         +P+ GP +VL++++   ICG+D+H       +   +K  + IGHE  G + ++GS V     G RV+ E  I C  C +C+GGR +LCP         V+G+ A  +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA  +V+ DV+D+RL +A ++GA  +V
Sbjct:    8 ETNKGIWLEQV--------PVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTMGIGV-NVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_XANOM (L-threonine 3-dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=tdh PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.412e-28
Identity = 72/216 (33.33%), Postives = 112/216 (51.85%), Query Frame = 1
Query:  169 EVNMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            E N   WL  V         +P+ GP +VL++++   ICG+D+H       +   +K  + IGHE  G + ++GS V     G RV+ E  I C  C +C+GGR +LCP         V+G+ A  +V PA   + +PD +  E  A  +P     H     ++  E +VLI GAGPIG++     +  GA  +V+ DV+D+RL +A ++GA  +V
Sbjct:    8 ETNKGIWLEQV--------PVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTMGIGV-NVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGE-DVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVV 213          
The following BLAST results are available for this feature:
BLAST of CK934526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
TDH_CHRVO1.173e-2835.47L-threonine 3-dehydrogenase OS=Chromobacterium vio... [more]
TDH_ALTMD1.173e-2834.33L-threonine 3-dehydrogenase OS=Alteromonas macleod... [more]
TDH_VIBSL1.532e-2835.53L-threonine 3-dehydrogenase OS=Vibrio splendidus (... [more]
TDH_SHESH1.532e-2835.38L-threonine 3-dehydrogenase OS=Shewanella sedimini... [more]
TDH_PHOPR1.532e-2835.90L-threonine 3-dehydrogenase OS=Photobacterium prof... [more]
TDH_BURP81.532e-2837.44L-threonine 3-dehydrogenase OS=Burkholderia phymat... [more]
TDH_KLEP72.613e-2835.71L-threonine 3-dehydrogenase OS=Klebsiella pneumoni... [more]
TDH_KLEP32.613e-2835.71L-threonine 3-dehydrogenase OS=Klebsiella pneumoni... [more]
TDH_XANOR3.412e-2833.33L-threonine 3-dehydrogenase OS=Xanthomonas oryzae ... [more]
TDH_XANOM3.412e-2833.33L-threonine 3-dehydrogenase OS=Xanthomonas oryzae ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_A12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934526 ID=CK934526; Name=CK934526; organism=Citrus sinensis; type=EST; length=819bp
GCGGGGGCGGCCNNNTCAAATCATATCCCATANNNAGAATCAGAATAAAT
GGTAGCTTAAAATGTTGTGTACAGAGTGAAGTCTCTTCTGTGCACTTGTG
TTTTTGAAGGGTAAAAAGCAAATATGGGCAAAGGAGGGATGTCACAAGGA
GAAAAGAAGGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTGT
CAACACCCTCAAGATTCAACCTTTTGAGCTTCCTTCTCTGGGACCATATG
ATGTTTTAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGATGTGCAT
TATCTCAAGACCTTGAGGTGTGCCGATTTTGTTGTGAAAGAGCCTATGGT
GATTGGGCACGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGA
AGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCCGGGATCAGCTGC
TGGCGATGCGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGAT
AAAATTTTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATCAGGTGG
TGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAG
GAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCG
TGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCA
TAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATT
GTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGG
TGCAGATAATATTGTTAAA
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