CK934526

Overview
NameCK934526
Unique NameCK934526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length819
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2505 contig Csv1_Contig2505:48..866. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_DEIRA (L-threonine 3-dehydrogenase OS=Deinococcus radiodurans GN=tdh PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.284e-32
Identity = 79/197 (40.10%), Postives = 114/197 (57.87%), Query Frame = 1
Query:  226 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            E+P+ GP D+L+R++   ICG+DVH  K    A   V  PMV+GHE  GV+  +GSEV+    GDRV+ E  ++C  C +C+ GR +LC   +        GS A  +V PA   FKLPD++  +  A+ +P    +H     ++  E +VLI GAGPIG +    AR  GA  +VI DV+DYRL +A+++G    V
Sbjct:   19 EVPTPGPNDLLIRIRKGSICGTDVHIYKWDDWASQTVPVPMVVGHEYVGVVAGMGSEVRGFEIGDRVSGEGHVTCGHCRNCRAGRRHLCRNTQGVGVNR-PGSFAEYLVLPAFNAFKLPDDIPDDVAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGCMAAAVARHVGARNVVITDVNDYRLDLARQMGVTRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_DEIDV (L-threonine 3-dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=tdh PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.284e-32
Identity = 78/198 (39.39%), Postives = 115/198 (58.08%), Query Frame = 1
Query:  226 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            E+P  GP D+L+R+K   ICG+DVH  K    A   +  PMV+GHE  GV+  +GSEV+    GDRV+ E  ++C  C +C+ GR +LC   +      P  GS A  +V PA   FKLPD++  +  A+ +P    +H     ++  E +VL+ GAGPIG++    AR  GA  +VI D++DYRL +A+++G    V
Sbjct:   19 EVPRPGPNDLLIRVKKGSICGTDVHIYKWDEWAQKTIPVPMVVGHEYVGVVAAMGSEVRGFNVGDRVSGEGHVTCGHCRNCRAGRRHLCRNTLGVGVNRP--GSFAEYLVLPAFNAFKLPDDIPDDVAAIFDPFGNAVHTALSFDLVGE-DVLVTGAGPIGVMAAAVARHVGARNVVITDINDYRLDLARKMGVTRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_COLP3 (L-threonine 3-dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=tdh PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.895e-32
Identity = 77/197 (39.09%), Postives = 112/197 (56.85%), Query Frame = 1
Query:  226 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEIKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            E P LG  D+L+++K   ICG+D+H       A   V  PMV+GHE AG +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC            GS A  +V PA   FKLPD +S +  ++ +P    +H     ++  E +VLI GAGPIG++    A+  GA  +VI D+++YRL +A+++GA   V
Sbjct:   19 EKPKLGHNDLLIKIKKTAICGTDIHIYNWDEWAQKTVPTPMVVGHEYAGEVVGIGQEVKGFTLGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNRA-GSFAEYLVIPAYNAFKLPDEISDDLASIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVAKHVGARHVVITDINEYRLDLARKMGATRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_ANADF (L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=tdh PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.087e-32
Identity = 75/197 (38.07%), Postives = 114/197 (57.87%), Query Frame = 1
Query:  229 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            +P +G +DV +R++   ICG+DVH       +   +  PM++GHE  GV++ VG EV+   PGDRV+ E  ++C  C +C+ GR +LC   I      P  GS A  VV PAD  +++PD++  E  A+ +P     H      +  E +VL+ GAGPIG++ +  AR  GA  +V+ DV+DYRL +A+ +GA   V
Sbjct:   21 VPEVGVHDVRIRVRKSAICGTDVHIYNWDEWSQRTIPVPMIVGHEYVGVVDAVGGEVEAFHPGDRVSGEGHVTCGFCRNCRAGRRHLCRHTIGVGVNRP--GSFAEYVVIPADNVYRIPDDIPDEVAAIFDPYGNATHTALSFELVGE-DVLVTGAGPIGVMAVSIARHVGARHVVVTDVNDYRLGLARRMGATRAV 214          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_ANAD2 (L-threonine 3-dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=tdh PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.644e-32
Identity = 75/197 (38.07%), Postives = 115/197 (58.38%), Query Frame = 1
Query:  229 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            +P +G +DV++R+    ICG+DVH       +   V  PMV+GHE  G +EKVG+EV+   PG+RV+ E  ++C  C +C+ GR +LC   +      P  GS A  VV PAD  +++PD++  +  A+ +P     H     ++  E +VL+ GAGPIG++    AR  GA  +V+ DV+DYRL +A+ +GA   V
Sbjct:   21 VPEVGVHDVMIRVTKSAICGTDVHIYNWDEWSQKTVPVPMVVGHEYVGRVEKVGAEVEAFRPGERVSGEGHVTCGFCRNCRAGRRHLCRHTVGVGVNRP--GSFAEYVVIPADNVYRIPDDIPDDIAAIFDPFGNATHTALSFDLVGE-DVLVTGAGPIGVMAAAIARHVGARHVVVTDVNDYRLDLARRMGASRAV 214          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_ANASK (L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp. (strain K) GN=tdh PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.480e-31
Identity = 74/197 (37.56%), Postives = 115/197 (58.38%), Query Frame = 1
Query:  229 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            +P +G +DV++++    ICG+DVH       +   V  PMV+GHE  G +EKVG+EV+   PG+RV+ E  ++C  C +C+ GR +LC   +      P  GS A  VV PAD  +++PD++  +  A+ +P     H     ++  E +VL+ GAGPIG++    AR  GA  +V+ DV+DYRL +A+ +GA   V
Sbjct:   21 VPEVGVHDVMIKVTKSAICGTDVHIYNWDEWSQKTVPVPMVVGHEYVGRVEKVGAEVEAFRPGERVSGEGHVTCGFCRNCRAGRRHLCRHTVGVGVNRP--GSFAEYVVIPADNVYRIPDDIPDDIAAIFDPFGNATHTALSFDLVGE-DVLVTGAGPIGVMAAAIARHVGARHVVVTDVNDYRLDLARRMGASRAV 214          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_ANADE (L-threonine 3-dehydrogenase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tdh PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.480e-31
Identity = 74/197 (37.56%), Postives = 115/197 (58.38%), Query Frame = 1
Query:  229 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            +P +G +DV++R+    ICG+DVH       +   V  PMV+GHE  G +E+VG+EV+   PG+RV+ E  ++C  C +C+ GR +LC   +      P  GS A  VV PAD  +++PD++  +  A+ +P     H     ++  E +VL+ GAGPIG++    AR  GA  +V+ DV+DYRL +A+ +GA   V
Sbjct:   21 VPEVGVHDVMIRVTKSAICGTDVHIYNWDEWSQKTVPVPMVVGHEYVGRVERVGAEVEAFRPGERVSGEGHVTCGFCRNCRAGRRHLCRHTVGVGVNRP--GSFAEYVVIPADNVYRIPDDIPDDIAAIFDPFGNATHTALSFDLVGE-DVLVTGAGPIGVMAAAIARHVGARHVVVTDVNDYRLDLARRMGASRAV 214          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_AERS4 (L-threonine 3-dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=tdh PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.594e-31
Identity = 77/196 (39.29%), Postives = 110/196 (56.12%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P LG  D+L++++   ICG+D+H       A   +  PMV+GHE  G +  VG EV+    GDRV+ E  I+C  C +C+ GR +LC   I      P  GS A  +V PA   FKLPDN+  E  A+ +P    +H     ++  E +VLI GAGPIG++     R  GA  +VI DV++YRL +A+++GA   V
Sbjct:   21 PELGHNDLLIKIRKTAICGTDMHIYNWDEWAQKTIPVPMVVGHEYVGEVVAVGQEVRGFAVGDRVSGEGHITCGHCRNCRAGRTHLCRNTIGVGVNRP--GSFAEYLVIPAFNAFKLPDNIPDELAAIFDPFGNAVHTALSFDLVGE-DVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_YERPY (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=tdh PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.636e-30
Identity = 73/196 (37.24%), Postives = 111/196 (56.63%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P LG  D++++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  GS A  +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V
Sbjct:   21 PELGHNDIMIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNRP--GSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVITDVNEYRLDLARKMGVTRAV 213          
BLAST of CK934526 vs. ExPASy Swiss-Prot
Match: TDH_YERPS (L-threonine 3-dehydrogenase OS=Yersinia pseudotuberculosis GN=tdh PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.636e-30
Identity = 73/196 (37.24%), Postives = 111/196 (56.63%), Query Frame = 1
Query:  232 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-IKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 816
            P LG  D++++++   ICG+DVH       +   +  PMV+GHE  G +  +G EVK    GDRV+ E  I+C  C +C+GGR +LC   +      P  GS A  +V PA   FK+PDN+S E  A+ +P    +H     ++  E +VL+ GAGPIG++     +  GA  +VI DV++YRL +A+++G    V
Sbjct:   21 PELGHNDIMIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVAIGQEVKGFNIGDRVSGEGHITCGHCRNCRGGRTHLCRNTVGVGVNRP--GSFAEYLVIPAFNAFKIPDNISDELAAIFDPFGNAVHTALSFDLVGE-DVLVSGAGPIGIMAAAVCKHVGARHVVITDVNEYRLDLARKMGVTRAV 213          
The following BLAST results are available for this feature:
BLAST of CK934526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
TDH_DEIRA2.284e-3240.10L-threonine 3-dehydrogenase OS=Deinococcus radiodu... [more]
TDH_DEIDV2.284e-3239.39L-threonine 3-dehydrogenase OS=Deinococcus deserti... [more]
TDH_COLP33.895e-3239.09L-threonine 3-dehydrogenase OS=Colwellia psychrery... [more]
TDH_ANADF5.087e-3238.07L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp... [more]
TDH_ANAD26.644e-3238.07L-threonine 3-dehydrogenase OS=Anaeromyxobacter de... [more]
TDH_ANASK1.480e-3137.56L-threonine 3-dehydrogenase OS=Anaeromyxobacter sp... [more]
TDH_ANADE1.480e-3137.56L-threonine 3-dehydrogenase OS=Anaeromyxobacter de... [more]
TDH_AERS49.594e-3139.29L-threonine 3-dehydrogenase OS=Aeromonas salmonici... [more]
TDH_YERPY1.636e-3037.24L-threonine 3-dehydrogenase OS=Yersinia pseudotube... [more]
TDH_YERPS1.636e-3037.24L-threonine 3-dehydrogenase OS=Yersinia pseudotube... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_A12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934526 ID=CK934526; Name=CK934526; organism=Citrus sinensis; type=EST; length=819bp
GCGGGGGCGGCCNNNTCAAATCATATCCCATANNNAGAATCAGAATAAAT
GGTAGCTTAAAATGTTGTGTACAGAGTGAAGTCTCTTCTGTGCACTTGTG
TTTTTGAAGGGTAAAAAGCAAATATGGGCAAAGGAGGGATGTCACAAGGA
GAAAAGAAGGATGGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTGT
CAACACCCTCAAGATTCAACCTTTTGAGCTTCCTTCTCTGGGACCATATG
ATGTTTTAGTCAGGATGAAAGCCGTTGGTATTTGTGGAAGTGATGTGCAT
TATCTCAAGACCTTGAGGTGTGCCGATTTTGTTGTGAAAGAGCCTATGGT
GATTGGGCACGAGTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGA
AGACTTTGGTGCCCGGTGACCGTGTGGCCCTGGAACCCGGGATCAGCTGC
TGGCGATGCGATCACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGAT
AAAATTTTTTGCAACTCCGCCCGTTCATGGTTCCCTGGCTAATCAGGTGG
TGCATCCTGCAGACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAG
GAAGGGGCTATGTGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCG
TGCCAATATCGGTCCTGAGACAAATGTGCTTATCATGGGAGCAGGGCCCA
TAGGACTTGTCACAATGCTAGGAGCTCGTGCTTTTGGAGCTCCTAGAATT
GTCATTGTGGATGTGGATGACTATCGTTTATCTGTTGCAAAGGAACTTGG
TGCAGATAATATTGTTAAA
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