CK934531
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.250e-27 Identity = 43/81 (53.09%), Postives = 50/81 (61.73%), Query Frame = 3
Query: 147 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNF 380
G N ATFY YG+LYS GYGT TAALSTALFN+G SCG CY I C D +WCL G ++++TATNF
Sbjct: 25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNF 105 HSP 2 Score: 58.151 bits (139), Expect = 3.250e-27 Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 2
Query: 377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
FC GGWCNPP +HFD++QP ++ I YR G+VPV ++R
Sbjct: 105 FCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQR 151
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.059e-26 Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 3
Query: 153 INARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATN 377
++ ATFY YGNLYS GYGTNTAALS+ALFN+G +CG CY+I C ++ KWC GT + +TATN
Sbjct: 25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATN 101 HSP 2 Score: 58.9214 bits (141), Expect = 2.059e-26 Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 2
Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
GGWCNPP+QHFD++QP ++ I YR G+VPV ++R
Sbjct: 114 GGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQR 148
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.535e-26 Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 3
Query: 132 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC----VNDPKWCLP----GTIMVTATN 377
A G W +A ATFY YGN Y QGYGT+TAALS +F +GLSCG+C+E++C D + CLP +I+VTAT+
Sbjct: 24 AAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATD 113 HSP 2 Score: 62.3882 bits (150), Expect = 4.535e-26 Identity = 24/37 (64.86%), Postives = 31/37 (83.78%), Query Frame = 2
Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKRYA 523
GGWCNPP HFDLSQP F IA++++G+VPV+Y+R A
Sbjct: 126 GGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVA 162
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.541e-26 Identity = 40/78 (51.28%), Postives = 46/78 (58.97%), Query Frame = 3
Query: 150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATN 377
W A ATFY YGNLY+ GYG N AALS+ALFN+G CG+CY I C + WC PGT I +TATN
Sbjct: 23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATN 100 HSP 2 Score: 59.6918 bits (143), Expect = 4.541e-26 Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 2
Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
GGWCNPP++HFD+SQP + IA Y+AG+VPV +KR
Sbjct: 113 GGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKR 147
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 7.690e-26 Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 3
Query: 150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNF 380
W +A ATFY YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C + +WC GT + VTATN+
Sbjct: 27 WTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNY 105 HSP 2 Score: 59.3066 bits (142), Expect = 7.690e-26 Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 2
Query: 377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
+C GGWCNPP++HFD+SQP ++ IA Y +G+VPV Y R
Sbjct: 105 YCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYAR 151
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 7.690e-26 Identity = 38/77 (49.35%), Postives = 46/77 (59.74%), Query Frame = 3
Query: 156 NARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPG--TIMVTATN 377
+A ATFY YGNLY+ GYG AALS+ALFN+G CG+CY I C + KWC PG +I +TATN
Sbjct: 30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATN 106 HSP 2 Score: 65.0846 bits (157), Expect = 7.690e-26 Identity = 25/35 (71.43%), Postives = 32/35 (91.43%), Query Frame = 2
Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
GGWCNPP+QHFD+SQP +++IA Y+AG+VPV YKR
Sbjct: 119 GGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKR 153
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.302e-25 Identity = 41/79 (51.90%), Postives = 45/79 (56.96%), Query Frame = 3
Query: 150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATN 377
W A ATFY YGNLY QGYG + AALS ALFN+G SCG CY I C P+WC GT + VTATN
Sbjct: 28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATN 106 HSP 2 Score: 59.6918 bits (143), Expect = 1.302e-25 Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2
Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
GGWCNPP+ HFD+SQP ++ I Y+AG+VPV Y+R
Sbjct: 119 GGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQR 153
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.850e-25 Identity = 54/91 (59.34%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 141 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFAHRTTPSPT 407
GG W NA ATFY YGNLYSQGYG NTAALSTALFNNG SCG+C+EIKC +DP+WC+PG +I+VTATNF P+
Sbjct: 33 GGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPS 123
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25 Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 3
Query: 141 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFAHRTTPSPT 407
GG W NA ATFY YGNLYSQGYGTNTAALSTALFNNG+SCG+C+E+KC NDP+WC G +I++TATNF P+
Sbjct: 28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPS 118 HSP 2 Score: 68.9366 bits (167), Expect = 3.059e-11 Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 2
Query: 377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
FC GGWCNPP++HFDL+ PVF IAQYRAG+VPV+Y+R
Sbjct: 109 FCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRR 155
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.737e-25 Identity = 42/80 (52.50%), Postives = 49/80 (61.25%), Query Frame = 3
Query: 147 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATN 377
GW A ATFY YG+LYS GYGTNTAALST LFN+G SCG CY I C D ++C+ GT + +TATN
Sbjct: 33 GWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATN 112 HSP 2 Score: 54.6842 bits (130), Expect = 3.737e-25 Identity = 20/35 (57.14%), Postives = 27/35 (77.14%), Query Frame = 2
Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517
GGWCNPP+QHFD+++P + I Y G+VPV Y+R
Sbjct: 125 GGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQR 159 The following BLAST results are available for this feature:
BLAST of CK934531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934531 ID=CK934531; Name=CK934531; organism=Citrus sinensis; type=EST; length=725bpback to top |