CK934531
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 2.221e-21 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATNF 380 W +A+A++Y +G+L GYG T LSTALF G +CG CYE+KCV+D K+CLPGT I+VTATNF Sbjct: 33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNF 109 HSP 2 Score: 45.0542 bits (105), Expect = 2.221e-21 Identity = 20/47 (42.55%), Postives = 26/47 (55.32%), Query Frame = 2 Query: 377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 FC GG CNPP HF L F+ IA ++AGV+P+ Y+R Sbjct: 109 FCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRR 155
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.886e-21 Identity = 36/78 (46.15%), Postives = 47/78 (60.26%), Query Frame = 3 Query: 150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATNF 380 W ARAT+Y YG+L GYG T LS LF G CG+C+E++CV+D +WC+PGT I++TATNF Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNF 117 HSP 2 Score: 44.2838 bits (103), Expect = 2.886e-21 Identity = 20/47 (42.55%), Postives = 26/47 (55.32%), Query Frame = 2 Query: 377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 FC GG CNPP +HF L F+ IA ++AG +PV Y+R Sbjct: 117 FCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRR 163
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.761e-21 Identity = 39/81 (48.15%), Postives = 47/81 (58.02%), Query Frame = 3 Query: 147 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNF 380 GWI A AT+Y Y N Y G+G +TAALS LF +G SCG CY+++C DPKWCL G + VTATNF Sbjct: 26 GWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNF 106 HSP 2 Score: 44.2838 bits (103), Expect = 3.761e-21 Identity = 19/35 (54.29%), Postives = 24/35 (68.57%), Query Frame = 2 Query: 416 GWCNPPQQHFDLSQPVFQHIAQY-RAGVVPVAYKR 517 GWCN P+ HFD+S P F IA+ G+VPV Y+R Sbjct: 114 GWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRR 148
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 8.268e-21 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 150 WINARATFYXXXXXXXXXXXXXX-YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATN 377 W +ARA +Y YG+L GYG TAALSTALFN+G SCG+CYEI C +P+ CL G+I +TAT+ Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATD 121 HSP 2 Score: 44.669 bits (104), Expect = 8.268e-21 Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 2 Query: 419 WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 WC P +HFDLS P+F IAQ +A +VPV Y+R Sbjct: 129 WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRR 161
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.403e-20 Identity = 39/80 (48.75%), Postives = 42/80 (52.50%), Query Frame = 3 Query: 150 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNF 380 W+ ATFY YGNLY Q YG N AALST LFN+G SCG CY I C P WC G I VT TN+ Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY 102 HSP 2 Score: 48.521 bits (114), Expect = 1.403e-20 Identity = 17/35 (48.57%), Postives = 27/35 (77.14%), Query Frame = 2 Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 GGWCN + +FD+SQP +++I Y AG+VP+ Y++ Sbjct: 103 GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQ 137
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 57.7658 bits (138), Expect = 4.525e-18 Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 3 Query: 243 YGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATN 377 Y T TAALST LF +G CG CYE++CV P WC PG ++++T TN Sbjct: 85 YSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTN 130 HSP 2 Score: 54.6842 bits (130), Expect = 4.525e-18 Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 2 Query: 413 GGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 GGWCNPP+ HFD++ P F +AQ AG+VPV Y+R Sbjct: 143 GGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRR 177
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 5.899e-18 Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 3 Query: 219 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNF 380 YG+L YG TA +S ALF G +CG CYE++CVN WCL G T++VTAT+F Sbjct: 57 YGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDF 112 HSP 2 Score: 48.521 bits (114), Expect = 5.899e-18 Identity = 18/47 (38.30%), Postives = 29/47 (61.70%), Query Frame = 2 Query: 377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 FC GGWCN P++HF++S+ F +A+ +A +VPV ++R Sbjct: 112 FCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRR 158
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 8.144e-17 Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 3 Query: 219 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNF 380 YG+L + +A LS LFN G SCG+C E++CVN +WCL G +++VTAT+F Sbjct: 53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDF 108 HSP 2 Score: 47.3654 bits (111), Expect = 8.144e-17 Identity = 19/47 (40.43%), Postives = 27/47 (57.45%), Query Frame = 2 Query: 377 FCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 517 FC GGWCN P++H +LS F IA+ RA ++P+ Y+R Sbjct: 108 FCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRR 154
BLAST of CK934531 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 2.211e-12 Identity = 35/89 (39.33%), Postives = 45/89 (50.56%), Query Frame = 3 Query: 129 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFA 383 H N G G W++ ATFY G + GYG TAA+S ALF+NG CG+CYE+K + T++VTATN A Sbjct: 71 HVNHGRYKCGPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQA 152 HSP 2 Score: 37.7354 bits (86), Expect = 2.211e-12 Identity = 15/29 (51.72%), Postives = 22/29 (75.86%), Query Frame = 2 Query: 437 QHFDLSQPVFQHIAQYRAGVVPVAYKRYA 523 +HFDL+ P F IA+ + GVVPV+Y++ A Sbjct: 162 EHFDLTMPAFLSIAEEKLGVVPVSYRKVA 190 The following BLAST results are available for this feature:
BLAST of CK934531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934531 ID=CK934531; Name=CK934531; organism=Citrus sinensis; type=EST; length=725bpback to top |