CK934535

Overview
NameCK934535
Unique NameCK934535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1694 contig Csv1_Contig1694:1..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: LPP3_MOUSE (Lipid phosphate phosphohydrolase 3 OS=Mus musculus GN=Ppap2b PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.449e-13
Identity = 61/207 (29.47%), Postives = 96/207 (46.38%), Query Frame = 3
Query:  246 LRYPMKD----NTVPFWAVPLIAILLPFIVVHVY--YFIRRD---------VYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGV--FDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRG-HVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFF 812
            ++YP+K     N     AV ++  +L  I    Y  Y+++           V  L+  +   L+   I+   TD  K ++GR RP F   C PD   +   +   +N  C G++  ++E  KSF SGH S+S   + +L LYL  +   F  RG  + +  + F   ++A   G+SRV DY HH   V  G   G +V+  C + FF
Sbjct:   73 IKYPLKVSETINDAVLCAVGIVIAILAIITGEFYRIYYLKEKSRSTTQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCDPDFSQINCSEGYIQNYRCRGEDSKVQEARKSFFSGHASFSMFTMLYLVLYLQAR---FTWRGARLLRPLLQFTLLMMAFYTGLSRVSDYKHHPSDVLAGFAQGALVA--CCIVFF 274          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: LPP3_RAT (Lipid phosphate phosphohydrolase 3 OS=Rattus norvegicus GN=Ppap2b PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.199e-13
Identity = 61/207 (29.47%), Postives = 96/207 (46.38%), Query Frame = 3
Query:  246 LRYPMKD----NTVPFWAVPLIAILLPFIVVHVY--YFIRRD---------VYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGV--FDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRG-HVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFF 812
            ++YP+K     N     AV ++  +L  I    Y  Y+++           V  L+  +   L+   I+   TD  K ++GR RP F   C PD   +   +   +N  C G++  ++E  KSF SGH S+S   + +L LYL  +   F  RG  + +  + F   ++A   G+SRV DY HH   V  G   G +V+  C + FF
Sbjct:   73 IKYPLKVSETINDAVLCAVGIVIAILRIITGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCDPDFSQINCSEGYIQNYRCRGEDSKVQEARKSFFSGHASFSMFTMLYLVLYLQAR---FTWRGARLLRPLLQFTLLMMAFYTGLSRVSDYKHHPSDVLAGFAQGALVA--CCIVFF 274          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: LPP3_BOVIN (Lipid phosphate phosphohydrolase 3 OS=Bos taurus GN=PPAP2B PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.199e-13
Identity = 66/221 (29.86%), Postives = 102/221 (46.15%), Query Frame = 3
Query:  207 PFHR-FVGEDMMTDLRYPMKD----NTVPFWAVPLIAILLPFIVVHVY--YFIRRD---------VYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNV--TRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRG-HVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFF 812
            P+HR F   D    ++YP K     N     AV ++  +L  I    Y  Y+++           V  L+  +   L+   I+   TD  K ++GR RP F   C PD   +  +V   +N  C G++  ++E  KSF SGH S+S   + +L LYL  +   F  RG  + +  + F   ++A   G+SRV D+ HH   V  G   G +V+  C + FF
Sbjct:   61 PYHRGFYCND--ESIKYPQKTGETINDAVLTAVGIVIAILAIITGEFYRIYYLKEKSRSTIQNPYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLNVCNPDFSQINCSVGYIQNYRCRGEDSKVQEARKSFFSGHASFSMYTMLYLVLYLQAR---FTWRGARLLRPLLQFTLIMMAFYTGLSRVSDHKHHPSDVLAGFAQGALVA--CCIVFF 274          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: LPP2_HUMAN (Lipid phosphate phosphohydrolase 2 OS=Homo sapiens GN=PPAP2C PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.126e-13
Identity = 60/221 (27.15%), Postives = 99/221 (44.80%), Query Frame = 3
Query:  207 PFHR--FVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHV--YYFIRRD-----------VYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNV--VCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFF--CYLQFF 812
            P+ R  + G+D    +RYP + +T+    +  + I    I+V     Y +  D           V  ++  +   L+   ++  +TD  K  +GR RP+F   C PD   V  +V   +  VC G    + E   SF SGH+S+    + FL+LY+    R+  +   + +  + F     A  +G +RV DY HHW  V  G + G +V+    CY+  F
Sbjct:   31 PYKRGFYCGDD---SIRYPYRPDTITHGLMAGVTITATVILVSAGEAYLVYTDRLYSRSDFNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQLEKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQA--RLCWKWARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAALTVCYISDF 246          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: LPP2_BOVIN (Lipid phosphate phosphohydrolase 2 OS=Bos taurus GN=PPAP2C PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.344e-11
Identity = 56/210 (26.67%), Postives = 95/210 (45.24%), Query Frame = 3
Query:  207 PFHR--FVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHV--YYFIRRD-----------VYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNV-VCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVS 788
            P+ R  + G+D    +RYP + +T+    +  + I    I+V     Y +  D           +  L+  +   L+   ++  +TD  K   GR RP+F   C PD   V  +    V VC G +  + E   SF SGH+S+    + FL+LY+  + R+  +   + +  + F     A  +G +RV D+ HHW  V  G + G +V+
Sbjct:   31 PYKRGFYCGDD---SIRYPYRPDTITHGLMAGVIITATVILVSAGEAYLVYTDRLYSRSDFNNYLAALYKVVGTFLFGAAVSQSLTDLAKYMTGRLRPNFLAVCDPDWSRVNCSAYVQVEVCRGSSANVTESRLSFYSGHSSFGMYCMVFLALYV--QARLCWKWARLLRPTVQFFLVAFALYVGYTRVSDHKHHWSDVLVGLLQGALVA 235          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: LPP2_MOUSE (Lipid phosphate phosphohydrolase 2 OS=Mus musculus GN=Ppap2c PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.292e-11
Identity = 55/210 (26.19%), Postives = 94/210 (44.76%), Query Frame = 3
Query:  207 PFHR--FVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHV--YYFIRRD-----------VYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGV-FDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVS 788
            P+ R  + G+D    +RYP + +T+    +  + I    I+V +   Y +  D           V  ++  +   L+   ++  +TD  K  +GR RP F   C PD   V      +  VC G    + E   SF SGH+S+    + FL+LY+  + R+  +   + +  + F     A  +G +RV D+ HHW  V  G + G +V+
Sbjct:   31 PYKRGFYCGDD---SIRYPYRPDTITHGLMAGVIITATVILVSLGEAYLVYTDRLYSRSNFNNYVAAIYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPSFLAVCDPDWSQVNCSGYVQLEVCRGSPANVTEARLSFYSGHSSFGMYCMLFLALYV--QARLCWKWARLLRPTVQFFLVAFAIYVGYTRVSDHKHHWSDVLVGLLQGALVA 235          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: LPP2_RAT (Lipid phosphate phosphohydrolase 2 OS=Rattus norvegicus GN=Ppap2c PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.910e-11
Identity = 62/220 (28.18%), Postives = 99/220 (45.00%), Query Frame = 3
Query:  207 PFHR--FVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVH------VY---YFIRRDVYDLHHAI---LG-LLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGV-FDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFF--CYLQFF 812
            P+ R  + G+D    +RYP + +T+    +  + I    ++V       VY    + R D  +   AI   LG  L+   ++  +TD  K  +GR RP F   C PD   V      +  VC G    + E   SF SGH+S+    + FL+LY+  + R+  +   + +  + F     A  +G +RV D  HHW  V  G + G +V+    CY+  F
Sbjct:   31 PYKRGFYCGDD---SIRYPYRPDTITHGLMAGVIITATVVLVSSGEAYLVYTDRLYSRSDFNNYVAAIYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPSFLAVCDPDWSRVNCSGYVQVEVCRGSPANVTEARLSFYSGHSSFGMYCMLFLALYV--QARLCWKWARLLRPTVQFFLVAFAIYVGYTRVSDNKHHWSDVLVGLLQGALVACLTVCYVSDF 245          
The following BLAST results are available for this feature:
BLAST of CK934535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
LPP3_MOUSE2.449e-1329.47Lipid phosphate phosphohydrolase 3 OS=Mus musculus... [more]
LPP3_RAT3.199e-1329.47Lipid phosphate phosphohydrolase 3 OS=Rattus norve... [more]
LPP3_BOVIN3.199e-1329.86Lipid phosphate phosphohydrolase 3 OS=Bos taurus G... [more]
LPP2_HUMAN7.126e-1327.15Lipid phosphate phosphohydrolase 2 OS=Homo sapiens... [more]
LPP2_BOVIN1.344e-1126.67Lipid phosphate phosphohydrolase 2 OS=Bos taurus G... [more]
LPP2_MOUSE2.292e-1126.19Lipid phosphate phosphohydrolase 2 OS=Mus musculus... [more]
LPP2_RAT3.910e-1128.18Lipid phosphate phosphohydrolase 2 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_A03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934535 ID=CK934535; Name=CK934535; organism=Citrus sinensis; type=EST; length=836bp
GGGGAAAAAAACATTCTCGCTTTTACTTGTTTTTCAGAAATCCAAAAGAG
GTCAGCTGGTTCAGAGATTAGTGAAAAATGCCTGAGATTCAGTTGGGTGC
ACATACTGTAAGATCCCATGGACTTAAAGTTCTAAAGCTACACATGCACG
ACTGGCTGATTCTCTTGCTTCTTGGTGTAATAGAGATCATTTTGAATGTC
ATAGAACCATTTCACCGCTTTGTTGGAGAGGATATGATGACAGATTTGAG
ATACCCTATGAAAGACAATACCGTTCCCTTTTGGGCTGTTCCATTGATTG
CAATATTGCTCCCTTTTATTGTCGTGCATGTCTATTATTTCATCAGACGT
GATGTATATGATCTGCACCATGCCATACTAGGCCTTCTATATTCTGTGCT
CATTACTGGTGTTATAACTGATGCAATTAAAGATGCTGTTGGTCGTCCTC
GCCCAGATTTCTTTTGGCGGTGTTTTCCTGATGGTAAAGGGGTCTTTGAT
AATGTAACAAGGAACGTCGTGTGTACTGGGCAAAATCATGTTATTAAGGA
AGGGCACAAAAGTTTCCCAAGTGGACATACTTCGTGGTCTTTTGCTGGTC
TTGGTTTTCTTTCATTGTACTTGTCAGGAAAAATCAGGGTATTTGATCGT
AGAGGCCATGTTGCAAAGCTCTGTATTGTTTTCCTACCATTTCTTCTAGC
TGCTCTGATAGGAGTTTCTCGAGTTGATGACTATTGGCATCATTGGCAAG
GTGTCTTTGGTGGAGCTATCATAGGGACAATTGTTTCTTTCTTTTGTTAC
TTGCAATTCTTTCCACCTCCATATGATACAGATGGC
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