CK934562

Overview
NameCK934562
Unique NameCK934562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: UCP3_BOVIN (Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.852e-28
Identity = 66/169 (39.05%), Postives = 90/169 (53.25%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPP--YKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P DV  +R QA         R Y   +DA   + R+EGV  LW+G    + R  IV   ++ TYD +KE +L   ++ D    H  ++F AG  A++ ++PVDV+ TR MN        PP  Y    DC LK V  EGP A YKGF P+  R G + VV+FVT EQ++
Sbjct:  136 PTDVVKIRFQASMHTGLGGNRKYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCGEMVTYDIIKEKLLDYHLLTDNFPCHFVSAFGAGFCATLVASPVDVVKTRYMN-------SPPGQYHSPFDCMLKMVTQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQMK 297          

HSP 2 Score: 78.5666 bits (192), Expect = 4.135e-14
Identity = 50/171 (29.24%), Postives = 76/171 (44.44%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSA---QRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVM-NMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D A VR+Q  G   +A   +   Y+ V+  I  M+R EG  SL+ G    + R M   + ++  YD VK+    KG     + T + A    G +A   + P DV+  R   +M    G +  Y G +D      R EG   L+KG +P I+R         VT + ++
Sbjct:   33 PLDTAKVRLQIQGENQAALAARSAQYRGVLGTILTMVRTEGPRSLYSGLVAGLQRQMSFASIRIGLYDSVKQFYTPKGSDHSSIITRILAGCTTGAMAVTCAQPTDVVKIRFQASMHTGLGGNRKYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCGEMVTYDIIK 203          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: UCP4_HUMAN (Mitochondrial uncoupling protein 4 OS=Homo sapiens GN=SLC25A27 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.761e-26
Identity = 63/170 (37.06%), Postives = 99/170 (58.24%), Query Frame = 1
Query:   49 NPADVAMVRMQADG-RLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNM-KVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            NP D+  V+MQ +G R    +   ++ V  A A++L + G+  LW G    + RA +V    L TYD VK  ++    + D + TH  +S  +GLVAS+   P DVI +R+MN  +   GR   YK + DC ++ V+ EG M+LYKGF+P+  R  P+++V ++T E++R
Sbjct:  146 NPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMTPWSMVFWLTYEKIR 315          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: DIC1_YEAST (Mitochondrial dicarboxylate transporter OS=Saccharomyces cerevisiae GN=DIC1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25
Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEG-VASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLG-THVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            N ADV  +RMQ D  L +A+RRNYK+ ID + ++ R EG + +L+ G    + R +++TASQ+ TYD  K  ++ K         TH+TAS  AGLVA+   +P DV+ TR+MN    +G   P   AL      VR EGP  +++G++P+ +R GPFT+++F  +EQ++
Sbjct:  124 NFADVVNIRMQNDSALEAAKRRNYKNAIDGVYKIYRYEGGLKTLFTGWKPNMVRGILMTASQVVTYDVFKNYLVTKLDFDASKNYTHLTASLLAGLVATTVCSPADVMKTRIMNG---SGDHQP---ALKILADAVRKEGPSFMFRGWLPSFTRLGPFTMLIFFAIEQLK 287          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: UCP1_SUNMU (Mitochondrial brown fat uncoupling protein 1 OS=Suncus murinus GN=UCP1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25
Identity = 61/169 (36.09%), Postives = 97/169 (57.40%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPP--YKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P +VA VRMQA   L   + R Y    +A   +++ EG   LW+G+SL + R +I+  ++L  YD +KE ++K  V+ D +  H+ A+  AG   +  ++PVDV+ TR +N        PP  Y    +CAL  ++ EG  A +KGF+P+  R G +TV++ VT EQ++
Sbjct:  134 PTEVAKVRMQAQSSLHWLKPR-YSGTYNAYYVIVKTEGFLGLWKGTSLNLTRNVIINCTELVVYDVLKEALVKNNVLADDIPCHLLAALTAGFCTTALASPVDVVKTRFIN-------SPPGYYPHVHNCALNMLQKEGLRAFFKGFVPSFLRLGSWTVIMHVTFEQLK 294          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: M2OM_NEUCR (Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa GN=NCU10732 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.881e-25
Identity = 64/165 (38.79%), Postives = 91/165 (55.15%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLE 543
            NPAD+A++RMQ+DG  P A+R+NYKSVIDA+  + R EGVA+LW G++ TV RAM +   QLA + + K  +  +      + T ++AS  AG  AS  S P D + TR+           PY G +DC  K  + EG    Y+GF     R  P  +V  +  +
Sbjct:  161 NPADLALIRMQSDGLKPVAERKNYKSVIDALGGIARNEGVAALWAGAAPTVVRAMALNFGQLAFFSEAKAQLKARTQWSSKVQT-LSASAIAGFFASFFSLPFDFVKTRLQKQTRGPDGKLPYNGMVDCFAKVAKQEGVFRFYRGFGTYYVRIAPHAMVTLLVAD 324          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: UCP1_HUMAN (Mitochondrial brown fat uncoupling protein 1 OS=Homo sapiens GN=UCP1 PE=2 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 1.978e-24
Identity = 58/169 (34.32%), Postives = 95/169 (56.21%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPP--YKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P +V  VR+QA   L   + R Y    +A   +   EG+  LW+G++  + R++I+  ++L TYD +KE  +K  ++ D +  H+ ++  AG  A+  S+PVDV+ TR +N        PP  YK   +CA+K    EGP A +KG +P+  R G + V++FV  EQ++
Sbjct:  133 PTEVVKVRLQAQSHLHGIKPR-YTGTYNAYRIIATTEGLTGLWKGTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRFIN-------SPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLK 293          

HSP 2 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 43/167 (25.75%), Postives = 70/167 (41.92%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D A VR+Q  G  P++    YK V+  I  +++ EG   L+ G    + R +   + ++  YD V+E +         LG+ + A    G VA     P +V+  R+     + G  P Y G  +        EG   L+KG  P + R         VT + ++
Sbjct:   33 PLDTAKVRLQVQGECPTSSVIRYKGVLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPNLMRSVIINCTELVTYDLMK 199          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: DIC1_CANGA (Mitochondrial dicarboxylate transporter OS=Candida glabrata GN=DIC1 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.408e-24
Identity = 61/170 (35.88%), Postives = 100/170 (58.82%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLW-RGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGL-GTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            N AD+  +RMQ D  LP  +RRNYK+ ID + ++ + EG  SL+  G    + R +++TASQ+ TYD  K  ++ K  M      TH+T+S  AG VA+   +P DVI T VMN     G +  +  +    ++ +  EGP  +++G++P+ +R  PFT+++F  +EQ++
Sbjct:  117 NFADLINIRMQNDSALPLDKRRNYKNAIDGMVKIYKAEGAKSLFLTGWKPNMVRGVLMTASQVVTYDMFKNFLVTKYNMDPKKNSTHLTSSLLAGFVATTVCSPADVIKTIVMNAHKKPGHN--HDSSFKILMEAINKEGPSFMFRGWVPSFTRLAPFTMLIFFAMEQLK 284          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: UCP1_CANFA (Mitochondrial brown fat uncoupling protein 1 OS=Canis familiaris GN=UCP1 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23
Identity = 56/167 (33.53%), Postives = 93/167 (55.69%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P +V  VR+QA   L   + R Y    +A   +   EG+  LW+G++  + R +I+  ++L TYD +KE ++K  ++ D L  H  ++  AG   +V S+PVDV+ TR +N          Y    +CA+  +  EGP+A +KGF+P+  R G + V++FV  EQ++
Sbjct:  135 PTEVVKVRLQAQSHLHGRKPR-YTGTYNAYRIIATTEGLTGLWKGTTPNLMRNVIINCTELVTYDLMKEALVKNHLLADDLPCHFLSALVAGFCTTVLSSPVDVVKTRFVN-----SVPEQYTSVPNCAMTMLTKEGPLAFFKGFVPSFLRLGSWNVIMFVCFEQLK 295          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: OAC1_YEAST (Mitochondrial oxaloacetate transport protein OS=Saccharomyces cerevisiae GN=OAC1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.190e-22
Identity = 58/167 (34.73%), Postives = 91/167 (54.49%), Query Frame = 1
Query:   49 NPADVAMVRMQADGR-LPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQ 546
            +P  +   R+Q+    +   ++ +Y  V + +  + + EGV  L+RG    + R    ++ QL  Y+  K +++K  +M+DG   H+TAS  +GL  +V  NP DVI+TR+ N K        YKG +DC +KTVR EG  ALYKGF   + R  P T++    +EQ
Sbjct:  147 SPLFLVKTRLQSYSEFIKIGEQTHYTGVWNGLVTIFKTEGVKGLFRGIDAAILRTGAGSSVQLPIYNTAKNILVKNDLMKDGPALHLTASTISGLGVAVVMNPWDVILTRIYNQK-----GDLYKGPIDCLVKTVRIEGVTALYKGFAAQVFRIAPHTIMCLTFMEQ 308          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: UCP1_RABIT (Mitochondrial brown fat uncoupling protein 1 OS=Oryctolagus cuniculus GN=UCP1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.780e-21
Identity = 53/169 (31.36%), Postives = 92/169 (54.44%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPP--YKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P +V  VR+QA   L   + R Y    +A   +   E + SLW+G++  + R +I+  ++L TYD +K  +++  ++ D +  H  ++  AG   ++ S+PVDV+ TR +N        PP  Y    +CA+     EGP A +KGF+P+  R G + V++FV  E+++
Sbjct:  132 PTEVVKVRLQAQSHLHGLKPR-YTGTYNAYRIIATTESLTSLWKGTTPNLLRNVIINCTELVTYDLMKGALVRNEILADDVPCHFVSALIAGFCTTLLSSPVDVVKTRFIN-------SPPGQYASVPNCAMTMFTKEGPTAFFKGFVPSFLRLGSWNVIMFVCFEKLK 292          
The following BLAST results are available for this feature:
BLAST of CK934562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
UCP3_BOVIN3.852e-2839.05Mitochondrial uncoupling protein 3 OS=Bos taurus G... [more]
UCP4_HUMAN2.761e-2637.06Mitochondrial uncoupling protein 4 OS=Homo sapiens... [more]
DIC1_YEAST1.370e-2540.00Mitochondrial dicarboxylate transporter OS=Sacchar... [more]
UCP1_SUNMU8.881e-2536.09Mitochondrial brown fat uncoupling protein 1 OS=Su... [more]
M2OM_NEUCR8.881e-2538.79Putative mitochondrial 2-oxoglutarate/malate carri... [more]
UCP1_HUMAN1.978e-2434.32Mitochondrial brown fat uncoupling protein 1 OS=Ho... [more]
DIC1_CANGA4.408e-2435.88Mitochondrial dicarboxylate transporter OS=Candida... [more]
UCP1_CANFA2.857e-2333.53Mitochondrial brown fat uncoupling protein 1 OS=Ca... [more]
OAC1_YEAST9.190e-2234.73Mitochondrial oxaloacetate transport protein OS=Sa... [more]
UCP1_RABIT7.780e-2131.36Mitochondrial brown fat uncoupling protein 1 OS=Or... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934562 ID=CK934562; Name=CK934562; organism=Citrus sinensis; type=EST; length=751bp
GGGGTAGCGGCCGGTTTGATCGCCGGAGCAGTTGGGGCCACCGTTGGCAA
CCCCGCTGACGTGGCAATGGTCCGCATGCAAGCCGACGGCCGCCTCCCAT
CGGCTCAGCGGCGTAACTACAAGAGCGTAATCGACGCGATCGCGCAAATG
TTGAGGCAAGAGGGGGTCGCCAGTCTTTGGCGCGGGTCATCGCTGACGGT
GAACCGGGCGATGATCGTGACGGCGTCGCAGCTGGCGACGTACGATCAGG
TGAAGGAGATGATTCTGAAGAAGGGGGTGATGAGGGACGGACTGGGGACG
CACGTGACGGCGAGTTTTGCGGCGGGGCTTGTGGCGTCGGTGGCGTCGAA
TCCGGTGGACGTGATTATGACGAGGGTCATGAATATGAAGGTTGTGGCGG
GGAGGGACCCACCGTATAAGGGGGCCTTAGATTGCGCGCTGAAGACAGTG
AGAGCTGAAGGGCCCATGGCCCTTTATAAAGGGTTCATTCCAACCATTTC
GAGGCAGGGCCCTTTCACTGTAGTGTTGTTTGTGACATTAGAGCAAGTGA
GGAAGCTGCTCAAAGAGTTTTGATTATTTTAGGACGATGATGAATGATGA
TGCAAATTTAATGTTATTATTGTAACTTTTAGCAGTTGTTTTGGTTAGTG
AATGATTTTTTCATTGTTTTGTCACTGAGCTGCAAGGAAGCGGCACAAGC
AAACCTTGGATTTCTTAGCAACTACATAAAACGCGTAAACGAATCTTTTA
T
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