CK934562

Overview
NameCK934562
Unique NameCK934562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCM1B_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-B PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 47/149 (31.54%), Postives = 72/149 (48.32%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTI 498
            P D   V MQ  G       +   ++I  + QM+++ G+ SLWRG+ + V +    TA +   Y+Q K++   +   + G      A   AG  A  +  P++V+ TR+       GR   Y G  DCA K ++ EG  A YKG+IP I
Sbjct:  214 PLDRLKVMMQVHGS------KGNSNIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESG-KLGTAERFVAGSLAGATAQTSIYPMEVLKTRL-----AVGRTGQYSGMFDCAKKIMQKEGIRAFYKGYIPNI 350          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 47/149 (31.54%), Postives = 73/149 (48.99%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTI 498
            P D   V MQ  G       +   ++I  + QM+++ GV SLWRG+ + V +    TA +   Y+Q K++   +   + G      A   AG  A  +  P++V+ TR+       G+   Y G  DCA K ++ EG +A YKG+IP I
Sbjct:  214 PLDRLKVMMQVHGT------KGNSNIITGLKQMVKEGGVRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESG-KLGTAERFIAGSLAGATAQTSIYPMEVLKTRL-----AVGKTGQYSGMFDCAKKIMQKEGILAFYKGYIPNI 350          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 54/173 (31.21%), Postives = 84/173 (48.55%), Query Frame = 1
Query:   52 PADVAMVRMQAD-GRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAG----LVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLFVTLEQV 549
            P D A  R+ AD G+  SA  R +K + D + ++ + +G+  L++G +++V   +I  A+    Y   K      G++ D   TH+  S+        VA V S P D +  R+M      G D  YKG LDC  K  + EG  A +KG    + R   G F +VL+  L++V
Sbjct:  133 PLDFARTRLAADVGK--SATEREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGVYGTAK------GMLPDPRNTHIVVSWMIAQTVTAVAGVFSYPFDTVRRRMMMQSGRKGADIMYKGTLDCWRKIFKDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKV 297          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT3_HUMAN (ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 PE=1 SV=4)

HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13
Identity = 53/173 (30.64%), Postives = 83/173 (47.98%), Query Frame = 1
Query:   52 PADVAMVRMQAD-GRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAG----LVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLFVTLEQV 549
            P D A  R+ AD G+  S   R ++ + D + ++ + +G+  L++G S++V   +I  A+    YD  K      G++ D   TH+  S+        VA V S P D +  R+M      G D  Y G +DC  K  R EG  A +KG    + R   G F +VL+  L++V
Sbjct:  133 PLDFARTRLAADVGK--SGTEREFRGLGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAK------GMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKV 297          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC2_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Bos taurus GN=SLC25A25 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 51/169 (30.18%), Postives = 80/169 (47.34%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTH--VTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ       A R N   ++    QM+R+ G  SLWRG+ + V +    +A +   Y+Q+K +I   G  ++ L  H  + A   AG +A  +  P++V+ TR+   K        Y G LDCA K +  EG  A YKG++P +    P+  +     E ++
Sbjct:  206 PLDRLKVLMQVH-----ASRSNNMCIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKRLI---GSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKT-----GQYSGMLDCARKILAREGMAAFYKGYVPNMLGIIPYAGIDLAVYETLK 361          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC1_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Xenopus tropicalis GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 47/149 (31.54%), Postives = 73/149 (48.99%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTI 498
            P D   V MQ  G   +A      ++I  + QM+++ G+ SLWRG+ + V +    TA +   Y+Q K++   +   + G      A   AG  A  +  P++V+ TR+       G+   Y G  DCA K ++ EG  A YKG+IP I
Sbjct:  214 PLDRLKVMMQVHGSKGNA------NIITGLKQMVKEGGIRSLWRGNGVNVIKIAPETAMKFWAYEQYKKLFTSESG-KLGTAERFIAGSLAGATAQTSIYPMEVLKTRL-----AVGKTGQYSGMFDCAKKIMQREGVRAFYKGYIPNI 350          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: S2535_MOUSE (Solute carrier family 25 member 35 OS=Mus musculus GN=Slc25a35 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.500e-13
Identity = 43/163 (26.38%), Postives = 83/163 (50.92%), Query Frame = 1
Query:   70 VRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMR-DGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKV-VAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            ++ QA   +    +  ++ +  A+ ++ ++ G+  LWRG+   + R +I +++QL T+  +K+++ +  +         + A+  +G+   VA  P DV  TR+ N      G+   Y+G LD  L+T R EG   +YKG   +  R GP T++     +Q+R
Sbjct:  130 LQAQAASEIAVGHQYKHQGMFQALTEIGQKHGLVGLWRGAVGGLPRVVIGSSTQLCTFSSIKDLLSQWEIFPPQSWKVALAAAMVSGVAIVVAMTPFDVASTRLYNQPTDTRGKGLMYRGILDALLQTARTEGFFGMYKGIGASYFRLGPHTILSLFFWDQLR 292          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC2_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Homo sapiens GN=SLC25A25 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 49/169 (28.99%), Postives = 80/169 (47.34%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTH--VTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ       A R N   ++    QM+R+ G  SLWRG+ + V +    +A +   Y+Q+K ++   G  ++ L  H  + A   AG +A  +  P++V+ TR+   K        Y G LDCA + +  EG  A YKG++P +    P+  +     E ++
Sbjct:  206 PLDRLKVLMQVH-----ASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKRLV---GSDQETLRIHERLVAGSLAGAIAQSSIYPMEVLKTRMALRKT-----GQYSGMLDCARRILAREGVAAFYKGYVPNMLGIIPYAGIDLAVYETLK 361          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: HDMCP_HUMAN (Hepatocellular carcinoma down-regulated mitochondrial carrier protein OS=Homo sapiens GN=HDMCP PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 53/189 (28.04%), Postives = 85/189 (44.97%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRR----------------------NYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQV 549
            +P +VA VR+Q   +    QRR                       Y+  +  +A + R+EG+  L++GSS  V R     A+   +Y  + E +   G  R  +   + A   AG++A   + P+DVI +R   ++        Y+G L C + +VR EGP  L+KG +    R  P  +V+FV  E V
Sbjct:  114 SPTEVAKVRLQTQTQAQKQQRRLSASGPLAVPPMCPVPPACPEPKYRGPLHCLATVAREEGLCGLYKGSSALVLRDGHSFATYFLSYAVLCEWLSPAGHSRPDVPGVLVAGGCAGVLAWAVATPMDVIKSR---LQADGQGQRRYRGLLHCMVTSVREEGPRVLFKGLVLNCCRAFPVNMVVFVAYEAV 299          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC3_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 46/167 (27.54%), Postives = 79/167 (47.31%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ       A + N  +++  +  M+++ GV SLWRG+ + V +    +A +   Y+Q+K  I  +G        HV   F AG +A   +  + +    V+  ++   R   YKG LDCA + +  EGP A Y+G++P +    P+  +     E ++
Sbjct:  204 PLDRLKVFMQVH-----ASKSNRLNILGGLRNMIQEGGVLSLWRGNGINVLKIAPESAIKFMAYEQIKRAI--RGQQET---LHVQERFVAGSLAGATAQTI-IYPMEVLKTRLTLRRTGQYKGLLDCAKRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLK 359          
The following BLAST results are available for this feature:
BLAST of CK934562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
SCM1B_XENLA2.052e-1331.54Calcium-binding mitochondrial carrier protein SCaM... [more]
SCM1A_XENLA2.052e-1331.54Calcium-binding mitochondrial carrier protein SCaM... [more]
ADT3_PIG2.052e-1331.21ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT3_HUMAN2.680e-1330.64ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 P... [more]
SCMC2_BOVIN3.500e-1330.18Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_XENTR3.500e-1331.54Calcium-binding mitochondrial carrier protein SCaM... [more]
S2535_MOUSE3.500e-1326.38Solute carrier family 25 member 35 OS=Mus musculus... [more]
SCMC2_HUMAN7.798e-1328.99Calcium-binding mitochondrial carrier protein SCaM... [more]
HDMCP_HUMAN7.798e-1328.04Hepatocellular carcinoma down-regulated mitochondr... [more]
SCMC3_MOUSE1.018e-1227.54Calcium-binding mitochondrial carrier protein SCaM... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934562 ID=CK934562; Name=CK934562; organism=Citrus sinensis; type=EST; length=751bp
GGGGTAGCGGCCGGTTTGATCGCCGGAGCAGTTGGGGCCACCGTTGGCAA
CCCCGCTGACGTGGCAATGGTCCGCATGCAAGCCGACGGCCGCCTCCCAT
CGGCTCAGCGGCGTAACTACAAGAGCGTAATCGACGCGATCGCGCAAATG
TTGAGGCAAGAGGGGGTCGCCAGTCTTTGGCGCGGGTCATCGCTGACGGT
GAACCGGGCGATGATCGTGACGGCGTCGCAGCTGGCGACGTACGATCAGG
TGAAGGAGATGATTCTGAAGAAGGGGGTGATGAGGGACGGACTGGGGACG
CACGTGACGGCGAGTTTTGCGGCGGGGCTTGTGGCGTCGGTGGCGTCGAA
TCCGGTGGACGTGATTATGACGAGGGTCATGAATATGAAGGTTGTGGCGG
GGAGGGACCCACCGTATAAGGGGGCCTTAGATTGCGCGCTGAAGACAGTG
AGAGCTGAAGGGCCCATGGCCCTTTATAAAGGGTTCATTCCAACCATTTC
GAGGCAGGGCCCTTTCACTGTAGTGTTGTTTGTGACATTAGAGCAAGTGA
GGAAGCTGCTCAAAGAGTTTTGATTATTTTAGGACGATGATGAATGATGA
TGCAAATTTAATGTTATTATTGTAACTTTTAGCAGTTGTTTTGGTTAGTG
AATGATTTTTTCATTGTTTTGTCACTGAGCTGCAAGGAAGCGGCACAAGC
AAACCTTGGATTTCTTAGCAACTACATAAAACGCGTAAACGAATCTTTTA
T
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