CK934562

Overview
NameCK934562
Unique NameCK934562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT2_HUMAN (ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=6)

HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12
Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAG----LVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD     A+R  ++ + D + ++ + +G+  L++G +++V   +I  A+    YD  K      G++ D   TH+  S+        VA + S P D +  R+M      G D  Y G LDC  K  R EG  A +KG    + R   G F +VL+
Sbjct:  133 PLDFARTRLAADVGKAGAERE-FRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAK------GMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLY 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12
Identity = 49/166 (29.52%), Postives = 79/166 (47.59%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASF----AAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD     A+R  ++ + D + ++ + +G+  L++G +++V   +I  A+    YD  K      G++ D   TH+  S+    +   VA + S P D +  R+M      G D  Y G LDC  K  R EG  A +KG    + R   G F +VL+
Sbjct:  133 PLDFARTRLAADVGKAGAERE-FRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK------GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGGAFVLVLY 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT2_TACAC (ADP/ATP translocase 2 OS=Tachyglossus aculeatus aculeatus GN=SLC25A5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.055e-12
Identity = 50/167 (29.94%), Postives = 80/167 (47.90%), Query Frame = 1
Query:   52 PADVAMVRMQAD-GRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASF----AAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD G+   A  R +K + D + ++ + +G+  L++G +++V   +I  A+    YD  K      G++ D   TH+  S+    +   VA + S P D +  R+M      G D  Y G +DC  K  R EG  A +KG    + R   G F +VL+
Sbjct:  133 PLDFARTRLAADVGKAGDA--REFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAK------GMLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSGRKGSDIMYTGTIDCWKKIARDEGSKAFFKGAWSNVLRGMGGAFVLVLY 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: MFRN1_DANRE (Mitoferrin-1 OS=Danio rerio GN=slc25a37 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12
Identity = 53/168 (31.55%), Postives = 83/168 (49.40%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASV----ASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLE 543
            P D    RMQ+    P AQ   Y+SV  A+ +++R EG+    RG ++TV  A    A   A Y+++K  +    V+++G  +H+ A+  AG VA+V      NP +V+  R+         + PY+   DC L   R EG  A Y+ +   ++   PF  V F+T E
Sbjct:   53 PVDSVKTRMQSLQPDPKAQ---YRSVYGALKRIVRTEGLLRPLRGLNITVLGAGPAHALYFACYERIKRSL--SDVIQNGGNSHI-ANGVAGSVATVLHDAVMNPAEVVKQRMQMY------NSPYRSLYDCVLMVSRKEGLAAFYRSYSTQLTMNIPFQAVHFITYE 208          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 46/167 (27.54%), Postives = 77/167 (46.11%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D   V MQ  G    +       ++  + QM+++ GV SLWRG+ + V +    TA +   Y+Q+K  ++       G+     A   AG++A     P++V+ TR+   K        YKG  DCA   ++ EG  A YKG++P +    P+  +     E ++
Sbjct:  206 PLDRLKVLMQVHGCQGKSM-----CLMSGLTQMIKEGGVRSLWRGNGINVIKIAPETALKFMAYEQIKR-VMGSSQETLGISERFVAGSLAGVIAQSTIYPMEVLKTRLALRKT-----GQYKGISDCAKHILKTEGMSAFYKGYVPNMLGIIPYAGIDLAVYETLK 361          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT1_MOUSE (ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASF----AAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD    S+QR  +  + D + ++ + +G+  L++G S++V   +I  A+    YD  K      G++ D    H+  S+    +   VA + S P D +  R+M      G D  Y G LDC  K  + EG  A +KG    + R   G F +VL+
Sbjct:  133 PLDFARTRLAADVGKGSSQRE-FNGLGDCLTKIFKSDGLKGLYQGFSVSVQGIIIYRAAYFGVYDTAK------GMLPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTLDCWRKIAKDEGANAFFKGAWSNVLRGMGGAFVLVLY 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: YEA6_YEAST (Probable mitochondrial carrier YEL006W OS=Saccharomyces cerevisiae GN=YEL006W PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.126e-11
Identity = 44/150 (29.33%), Postives = 76/150 (50.67%), Query Frame = 1
Query:   52 PADVAMVRMQADG-RLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTI 498
            P DVA  R+QA G +  + Q ++YK      A + + EG A L++G   TV   +       + YD  ++  +        L ++ +++  AG +++VA+NP+ V+ TR+M    +      YKG +D   K ++ EG  ALY G +P +
Sbjct:   58 PFDVAKTRLQAQGLQNMTHQSQHYKGFFGTFATIFKDEGAAGLYKGLQPTVLGYIPTLMIYFSVYDFCRKYSVDIFPHSPFL-SNASSAITAGAISTVATNPIWVVKTRLMLQTGIGKYSTHYKGTIDTFRKIIQQEGAKALYAGLVPAL 206          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.126e-11
Identity = 43/149 (28.86%), Postives = 71/149 (47.65%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTI 498
            P D   V MQ  G   +       ++     QM+++ G+ SLWRG+   V +    TA +   Y+Q K+++ ++G  + G      +   AG  A     P++V+ TR+       G+   Y G  DCA K ++ EG  A YKG++P +
Sbjct:  214 PLDRLKVMMQVHGSKSAKM-----NIYGGFQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEG-QKIGTFERFVSGSMAGATAQTFIYPMEVLKTRL-----AVGKTGQYSGMFDCAKKILKYEGMGAFYKGYVPNL 351          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11
Identity = 42/149 (28.19%), Postives = 72/149 (48.32%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTI 498
            P D   + MQ  G      + +  ++     QM+++ G+ SLWRG+   V +    TA +   Y+Q K+++ ++G  + G      +   AG  A     P++V+ TR+       G+   Y G  DCA K ++ EG  A YKG++P +
Sbjct:  214 PLDRLKIMMQVHG-----SKSDKMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEG-QKIGTFERFISGSMAGATAQTFIYPMEVMKTRL-----AVGKTGQYSGIYDCAKKILKHEGLGAFYKGYVPNL 351          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: MFRN2_DANRE (Mitoferrin-2 OS=Danio rerio GN=slc25a28 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11
Identity = 49/171 (28.65%), Postives = 90/171 (52.63%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASV----ASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            P D    RMQ+    P+A+   Y++V+DA+ +++R EG+    RG ++T   A    A   A Y+++K+++    ++  G  +H+ A+ AAG VA++    A NP +V+  R+         + PY+  LDC     + EG +A Y+ +   ++   PF  + F+T E ++
Sbjct:   97 PIDCVKTRMQSLQPEPAAR---YRNVMDALWRIMRTEGIWRPIRGLNITAVGAGPAHALYFACYERLKKVL--SDIIHPGANSHL-ANGAAGCVATLLHDAAMNPTEVVKQRMQMY------NSPYRSVLDCMRCVWQREGALAFYRSYTTQLTMNVPFQALHFMTYEYLQ 255          
The following BLAST results are available for this feature:
BLAST of CK934562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
ADT2_HUMAN3.870e-1229.52ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 P... [more]
ADT2_BOVIN3.870e-1229.52ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=... [more]
ADT2_TACAC5.055e-1229.94ADP/ATP translocase 2 OS=Tachyglossus aculeatus ac... [more]
MFRN1_DANRE6.601e-1231.55Mitoferrin-1 OS=Danio rerio GN=slc25a37 PE=1 SV=1[more]
SCM2A_DANRE8.622e-1227.54Calcium-binding mitochondrial carrier protein SCaM... [more]
ADT1_MOUSE8.622e-1229.52ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 P... [more]
YEA6_YEAST1.126e-1129.33Probable mitochondrial carrier YEL006W OS=Saccharo... [more]
SCMC1_BOVIN1.126e-1128.86Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC1_HUMAN1.471e-1128.19Calcium-binding mitochondrial carrier protein SCaM... [more]
MFRN2_DANRE1.471e-1128.65Mitoferrin-2 OS=Danio rerio GN=slc25a28 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934562 ID=CK934562; Name=CK934562; organism=Citrus sinensis; type=EST; length=751bp
GGGGTAGCGGCCGGTTTGATCGCCGGAGCAGTTGGGGCCACCGTTGGCAA
CCCCGCTGACGTGGCAATGGTCCGCATGCAAGCCGACGGCCGCCTCCCAT
CGGCTCAGCGGCGTAACTACAAGAGCGTAATCGACGCGATCGCGCAAATG
TTGAGGCAAGAGGGGGTCGCCAGTCTTTGGCGCGGGTCATCGCTGACGGT
GAACCGGGCGATGATCGTGACGGCGTCGCAGCTGGCGACGTACGATCAGG
TGAAGGAGATGATTCTGAAGAAGGGGGTGATGAGGGACGGACTGGGGACG
CACGTGACGGCGAGTTTTGCGGCGGGGCTTGTGGCGTCGGTGGCGTCGAA
TCCGGTGGACGTGATTATGACGAGGGTCATGAATATGAAGGTTGTGGCGG
GGAGGGACCCACCGTATAAGGGGGCCTTAGATTGCGCGCTGAAGACAGTG
AGAGCTGAAGGGCCCATGGCCCTTTATAAAGGGTTCATTCCAACCATTTC
GAGGCAGGGCCCTTTCACTGTAGTGTTGTTTGTGACATTAGAGCAAGTGA
GGAAGCTGCTCAAAGAGTTTTGATTATTTTAGGACGATGATGAATGATGA
TGCAAATTTAATGTTATTATTGTAACTTTTAGCAGTTGTTTTGGTTAGTG
AATGATTTTTTCATTGTTTTGTCACTGAGCTGCAAGGAAGCGGCACAAGC
AAACCTTGGATTTCTTAGCAACTACATAAAACGCGTAAACGAATCTTTTA
T
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