CK934562

Overview
NameCK934562
Unique NameCK934562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11
Identity = 48/166 (28.92%), Postives = 78/166 (46.99%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAG----LVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD    +AQR  +  + + I ++ + +G+  L++G +++V   +I  A+    YD  K      G++ D    H+  S+        VA + S P D +  R+M      G D  Y G +DC  K  + EGP A +KG    + R   G F +VL+
Sbjct:  133 PLDFARTRLAADVGKGAAQRE-FTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAK------GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLY 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: HDMCP_RAT (Hepatocellular carcinoma down-regulated mitochondrial carrier homolog OS=Rattus norvegicus GN=Hdmcp PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 50/191 (26.18%), Postives = 83/191 (43.46%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRR------------------------NYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQV 549
            +P +VA VR+Q   +  + QRR                         Y   +  +  + R+EG+  L++GSS  + R     A+   +Y  + E +   G  +  +   + A   AG++A   + P+DVI +R   ++        Y+G L C + +VR EGP  L+KG      R  P  +V+FV  E V
Sbjct:  114 SPTEVAKVRLQTQAQSQTQQRRPSASWTSVAPALCPAPTACLEPRPKYSGPLHCLVTVAREEGLRGLYKGSSALLLREGHSFATYFLSYAVLSEWLTPAGQSQPDVLGVLVAGGCAGVLAWAVATPMDVIKSR---LQADGQGQQRYRGLLHCVVTSVREEGPRVLFKGLALNCCRAFPVNMVVFVAYEAV 301          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT1_RAT (ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.921e-11
Identity = 48/166 (28.92%), Postives = 78/166 (46.99%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASF----AAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD    S+QR  +  + D + ++ + +G+  L++G S++V   +I  A+    YD  K      G++ D    H+  S+    +   VA + S P D +  R+M      G D  Y G +DC  K  + EG  A +KG    + R   G F +VL+
Sbjct:  133 PLDFARTRLAADVGKGSSQRE-FNGLGDCLTKIFKSDGLKGLYQGFSVSVQGIIIYRAAYFGVYDTAK------GMLPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGRKAFFKGAWSNVLRGMGGAFVLVLY 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 44/149 (29.53%), Postives = 70/149 (46.98%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTI 498
            P D   V MQ  G           ++     QM+++ GV SLWRG+   V +    TA +   Y+Q K+++ ++G  + G      +   AG  A     P++V+ TR+       G+   Y G  DCA K ++ EG  A YKG++P +
Sbjct:  214 PLDRLKVMMQVHGS-------KSMNIFGGFRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQYKKLLTEEG-QKIGTFERFISGSMAGATAQTFIYPMEVMKTRL-----AVGKTGQYSGIYDCAKKILKYEGFGAFYKGYVPNL 349          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: CMC1_CAEEL (Probable calcium-binding mitochondrial carrier K02F3.2 OS=Caenorhabditis elegans GN=K02F3.2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGR--DPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLE 543
            NP ++  +R+Q  G +  A ++        +  +L++ G   L++GS     R +  +A     Y   K     +  M    GT   ++F AG+ A+    P DVI TR+     VA R     Y G +DCA K ++ EGPM+L+KG    + R  P   V  +T E
Sbjct:  487 NPLEIVKIRLQTAGEVQQAGKKI------GVFTVLKELGFLGLYKGSRACFLRDIPFSAIYFPAYAHAKLASADEDGMNSP-GTLFASAFIAGVPAAGLVTPADVIKTRLQ----VAARAGQTTYNGVIDCARKLIKEEGPMSLWKGTAARVCRSSPQFAVTLLTYE 642          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: MCFE_DICDI (Mitochondrial substrate carrier family protein E OS=Dictyostelium discoideum GN=mcfE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 43/173 (24.86%), Postives = 80/173 (46.24%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGT--HVTASFAAGLVASVASNPVDVIMTRVM---NMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            +P D    R+Q +       +  YK   +A+ Q+++ EGV+ L++G  +     +   A     Y+  K+ +  +   + G  T  H +A F A  + S+   P+D+I  R+    N + +      YKG+       ++ EG   LY+GF+P ++  GPF  + F   E+ +
Sbjct:   27 HPVDTVRARVQIE----KVGKSQYKGTFNALNQIIKNEGVSYLYKGFPIVATATVPAHALYFLGYEYSKQWVTDRYGKKWGESTITHFSAGFVADALGSLIWVPMDIIKQRLQVQTNTQKLNPNQTYYKGSFHAGKIILQEEGIRGLYRGFMPALATYGPFVGIYFSVYEKCK 195          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: HDMCP_MOUSE (Hepatocellular carcinoma down-regulated mitochondrial carrier homolog OS=Mus musculus GN=Hdmcp PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 50/191 (26.18%), Postives = 84/191 (43.98%), Query Frame = 1
Query:   49 NPADVAMVRMQADGRLPSAQRRN------------------------YKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQV 549
            +P +VA VR+Q   +  + QRR+                        Y   +  +  + R+EG+  L++GSS  + R     A+   +Y  + E +   G  +  +   + A   AG++A   + P+DVI +R   ++        Y+G L C + +VR EGP  L+KG      R  P  +V+FV  E V
Sbjct:  114 SPTEVAKVRLQTQTQAQTQQRRSSASWTSGAPALCPTPTACLEPRPKYSGPLHCLVTVAREEGLRGLYKGSSALLLREGHSFATYFLSYAMLCEWLTPAGHSQPDVLGVLVAGGCAGVLAWAVATPMDVIKSR---LQADGQGQHRYRGLLHCVVTSVREEGPRVLFKGLALNCCRAFPVNMVVFVAYEAV 301          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT1_HUMAN (ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 PE=1 SV=4)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 48/166 (28.92%), Postives = 78/166 (46.99%), Query Frame = 1
Query:   52 PADVAMVRMQADGRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASF----AAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD    +AQR  +  + D I ++ + +G+  L++G +++V   +I  A+    YD  K      G++ D    H+  S+    +   VA + S P D +  R+M      G D  Y G +DC  K  + EG  A +KG    + R   G F +VL+
Sbjct:  133 PLDFARTRLAADVGKGAAQRE-FHGLGDCIIKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAK------GMLPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGGAFVLVLY 291          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: ADT4_BOVIN (ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = 1
Query:   52 PADVAMVRMQAD-GRLPSAQRRNYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASN----PVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISR--QGPFTVVLF 531
            P D A  R+ AD G+ P  + R +K + D I ++ + +G+  L++G  ++V   ++  AS    YD VK      G++     TH   SF    V +  S     P D +  R+M     A R   YKG LDC +K  + EG  A ++G    I R   G   +VL+
Sbjct:  149 PLDFARTRLGADIGKGP--EERQFKGLGDCIMKIAKSDGIVGLYQGFGVSVQGIIVYRASYFGAYDTVK------GLLPKPKETHFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQSGEAERQ--YKGTLDCFMKIYQQEGIGAFFRGAFSNILRGTGGALVLVLY 305          
BLAST of CK934562 vs. ExPASy Swiss-Prot
Match: S2540_XENTR (Solute carrier family 25 member 40 OS=Xenopus tropicalis GN=slc25a40 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 40/146 (27.40%), Postives = 76/146 (52.05%), Query Frame = 1
Query:  115 NYKSVIDAIAQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGLVASVASNPVDVIMTRVMNMKVVAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVR 552
            +++   DA  Q++R EG+ SLW G   T+  A+  T      YDQ+++++++    R  + + + A   A L ++   +P+++I T++        R   YK    C   +V  +G +AL+KG+ PT+ R  PF+ + +   E V+
Sbjct:   84 HFRGTTDAFVQIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLRDILIRSMPERAEIAS-LVAGATARLWSATLISPLELIRTKMQY------RPLSYKELRQCIQSSVAKDGWLALWKGWGPTVLRDVPFSALYWHNYELVK 222          
The following BLAST results are available for this feature:
BLAST of CK934562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
ADT1_BOVIN1.471e-1128.92ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=... [more]
HDMCP_RAT1.921e-1126.18Hepatocellular carcinoma down-regulated mitochondr... [more]
ADT1_RAT1.921e-1128.92ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc2... [more]
SCMC1_RABIT3.276e-1129.53Calcium-binding mitochondrial carrier protein SCaM... [more]
CMC1_CAEEL3.276e-1129.34Probable calcium-binding mitochondrial carrier K02... [more]
MCFE_DICDI4.279e-1124.86Mitochondrial substrate carrier family protein E O... [more]
HDMCP_MOUSE4.279e-1126.18Hepatocellular carcinoma down-regulated mitochondr... [more]
ADT1_HUMAN4.279e-1128.92ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 P... [more]
ADT4_BOVIN7.299e-1130.54ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE... [more]
S2540_XENTR9.533e-1127.40Solute carrier family 25 member 40 OS=Xenopus trop... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_E04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934562 ID=CK934562; Name=CK934562; organism=Citrus sinensis; type=EST; length=751bp
GGGGTAGCGGCCGGTTTGATCGCCGGAGCAGTTGGGGCCACCGTTGGCAA
CCCCGCTGACGTGGCAATGGTCCGCATGCAAGCCGACGGCCGCCTCCCAT
CGGCTCAGCGGCGTAACTACAAGAGCGTAATCGACGCGATCGCGCAAATG
TTGAGGCAAGAGGGGGTCGCCAGTCTTTGGCGCGGGTCATCGCTGACGGT
GAACCGGGCGATGATCGTGACGGCGTCGCAGCTGGCGACGTACGATCAGG
TGAAGGAGATGATTCTGAAGAAGGGGGTGATGAGGGACGGACTGGGGACG
CACGTGACGGCGAGTTTTGCGGCGGGGCTTGTGGCGTCGGTGGCGTCGAA
TCCGGTGGACGTGATTATGACGAGGGTCATGAATATGAAGGTTGTGGCGG
GGAGGGACCCACCGTATAAGGGGGCCTTAGATTGCGCGCTGAAGACAGTG
AGAGCTGAAGGGCCCATGGCCCTTTATAAAGGGTTCATTCCAACCATTTC
GAGGCAGGGCCCTTTCACTGTAGTGTTGTTTGTGACATTAGAGCAAGTGA
GGAAGCTGCTCAAAGAGTTTTGATTATTTTAGGACGATGATGAATGATGA
TGCAAATTTAATGTTATTATTGTAACTTTTAGCAGTTGTTTTGGTTAGTG
AATGATTTTTTCATTGTTTTGTCACTGAGCTGCAAGGAAGCGGCACAAGC
AAACCTTGGATTTCTTAGCAACTACATAAAACGCGTAAACGAATCTTTTA
T
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