CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_HYPNA (Chaperone protein dnaJ OS=Hyphomonas neptunium (strain ATCC 15444) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-16
Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGV R   ++ +KSAYRK+A+KYHPD+NA D  A D FKEV  +Y ILSDP KR  YD  G  A
Sbjct:    3 KRDYYEVLGVERGVDEKALKSAYRKLAMKYHPDQNAGDTAAEDKFKEVGEAYAILSDPQKRAAYDRYGHGA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein dnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-16
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +D YE+LGVSR+   +EIK AYR++A KYHPD N +DP A + FKE++ +Y ILSDPDKR +YD  G   +
Sbjct:    5 KDYYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDPDKRARYDQYGHAGI 75          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-16
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            ++RD YE+LGV+R+    EIK AYRK+ALKYHPDKN ++  A + FKEV  +Y +LS+ DKRR+YD  G   V
Sbjct:    1 MKRDYYEILGVARSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLL2 (Chaperone protein dnaJ OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.437e-16
Identity = 46/104 (44.23%), Postives = 62/104 (59.62%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAV--NTMFAALFSKLG 590
            +++D YEVLGVSR+ +  EIK AYRK+AL+YHPDKN ++  A + FKEV  +Y +LS+ DKRR+YD  G   V              GA   N +F+A     G
Sbjct:    1 MKKDYYEVLGVSRSASKDEIKKAYRKLALQYHPDKNPDNKDAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGAGGAYAGGATDFNDIFSAFNDMFG 104          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PROVI (Chaperone protein dnaJ OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +++D YE+LGV R+    EIK AYRK+ALKYHPDKN ++  A D FKEV  +Y +LS+ DKRR+YD  G   V
Sbjct:    1 MKKDYYEILGVGRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBP (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            R  YEVLGVS+  +D EIKSAYRK+A+KYHPDKN  D  A + FKE T +Y +L DP KR+ YD  G
Sbjct:    4 RGYYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBA (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            R  YEVLGVS+  +D EIKSAYRK+A+KYHPDKN  D  A + FKE T +Y +L DP KR+ YD  G
Sbjct:    4 RGYYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPN (Chaperone protein dnaJ OS=Legionella pneumophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKL 587
            +RD YE+L VSRN +D EIK AYR++A+KYHPD+N  D  A + FKE+  +YNILSD  KR  YD  G   V              G    +F  +F  +
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGFGGFGDVFEDIFENI 102          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPL (Chaperone protein dnaJ OS=Legionella pneumophila (strain Lens) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKL 587
            +RD YE+L VSRN +D EIK AYR++A+KYHPD+N  D  A + FKE+  +YNILSD  KR  YD  G   V              G    +F  +F  +
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGFGGFGDVFEDIFENI 102          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPH (Chaperone protein dnaJ OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKL 587
            +RD YE+L VSRN +D EIK AYR++A+KYHPD+N  D  A + FKE+  +YNILSD  KR  YD  G   V              G    +F  +F  +
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGFGGFGDVFEDIFENI 102          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_HYPNA3.437e-1659.15Chaperone protein dnaJ OS=Hyphomonas neptunium (st... [more]
DNAJ_HALOH3.437e-1654.93Chaperone protein dnaJ OS=Halothermothrix orenii (... [more]
DNAJ_CHLTE3.437e-1654.79Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
DNAJ_CHLL23.437e-1644.23Chaperone protein dnaJ OS=Chlorobium limicola (str... [more]
DNAJ_PROVI4.489e-1654.79Chaperone protein dnaJ OS=Prosthecochloris vibriof... [more]
DNAJ_LEPBP4.489e-1659.70Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_LEPBA4.489e-1659.70Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_LEGPN4.489e-1643.00Chaperone protein dnaJ OS=Legionella pneumophila G... [more]
DNAJ_LEGPL4.489e-1643.00Chaperone protein dnaJ OS=Legionella pneumophila (... [more]
DNAJ_LEGPH4.489e-1643.00Chaperone protein dnaJ OS=Legionella pneumophila s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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