CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPC (Chaperone protein dnaJ OS=Legionella pneumophila (strain Corby) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKL 587
            +RD YE+L VSRN +D EIK AYR++A+KYHPD+N  D  A + FKE+  +YNILSD  KR  YD  G   V              G    +F  +F  +
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGFGGFGDVFEDIFENI 102          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEGPA (Chaperone protein dnaJ OS=Legionella pneumophila (strain Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 43/100 (43.00%), Postives = 56/100 (56.00%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKL 587
            +RD YE+L VSRN +D EIK AYR++A+KYHPD+N  D  A + FKE+  +YNILSD  KR  YD  G   V              G    +F  +F  +
Sbjct:    3 QRDYYELLEVSRNASDAEIKKAYRRLAMKYHPDRNPGDTSAEEKFKEIQKAYNILSDKQKRAAYDQFGHAGVDPSMGGGPGGFGGFGGFGDVFEDIFENI 102          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTE (Chaperone protein dnaJ OS=Clostridium tetani GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            ++D YEVLGV +   D EIK A+RK+ALKYHPDKNA +  A + FKE+  +Y +LSDP KR QYD  G
Sbjct:    3 KKDFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKRAQYDQFG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLP8 (Chaperone protein dnaJ OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            ++RD YE+LGVSR+    EIK AYRK+ALKYHPDKN ++  A + FKE   +Y +LS+ DKRR+YD  G   V
Sbjct:    1 MKRDYYEILGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGV 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAD (Chaperone protein dnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.489e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVS+  +D EIK AYRK+A+KYHPD+N ++  A D FKE + +Y +LSD +KR  YD  G  A
Sbjct:    3 KRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEDKFKEASEAYEVLSDSEKRSMYDRMGHNA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNFM (Chaperone protein dnaJ OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.862e-16
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YE+LGV+R  +++EIK AYRK+ALKYHPD+N  D  + ++FKE   +Y +L D  K+R YDT G E +
Sbjct:    3 KRDYYEILGVTRQASEEEIKKAYRKLALKYHPDRNPGDKDSEELFKEAAEAYEVLHDAQKKRIYDTYGHEGL 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_PSYA2 (Chaperone protein dnaJ OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.862e-16
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YE+LGVS+   ++E+K AYRK+A+KYHPD+N++DP A D FKE + +Y +LS  +KR  YD  G  A
Sbjct:    3 KRDFYEILGVSKTADNKEVKRAYRKLAMKYHPDRNSDDPDAEDKFKEASMAYEVLSSEEKRSAYDRMGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOPE (Chaperone protein dnaJ OS=Clostridium perfringens GN=dnaJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.862e-16
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLG+ +  +D EIK A+RKMA+KYHPD+N  D  A + FKEV  +Y++L DPDK+ +YD  G  A
Sbjct:    3 KRDYYEVLGLQKGASDDEIKRAFRKMAMKYHPDRNPGDKEAEENFKEVNEAYDVLKDPDKKAKYDQFGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRRW (Chaperone protein dnaJ OS=Ehrlichia ruminantium (strain Welgevonden) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.656e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            + D Y++LG+S+N T +EIK AYRKMALKYHPDKN  D  A + FKE++ +Y++L D DKR  YD  G  A
Sbjct:    3 KSDYYDLLGLSKNATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRAAYDRYGHSA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRRG (Chaperone protein dnaJ OS=Ehrlichia ruminantium (strain Gardel) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.656e-16
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            + D Y++LG+S+N T +EIK AYRKMALKYHPDKN  D  A + FKE++ +Y++L D DKR  YD  G  A
Sbjct:    3 KSDYYDLLGLSKNATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRAAYDRYGHSA 73          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LEGPC4.489e-1643.00Chaperone protein dnaJ OS=Legionella pneumophila (... [more]
DNAJ_LEGPA4.489e-1643.00Chaperone protein dnaJ OS=Legionella pneumophila (... [more]
DNAJ_CLOTE4.489e-1657.35Chaperone protein dnaJ OS=Clostridium tetani GN=dn... [more]
DNAJ_CHLP84.489e-1654.79Chaperone protein dnaJ OS=Chlorobaculum parvum (st... [more]
DNAJ_ACIAD4.489e-1654.93Chaperone protein dnaJ OS=Acinetobacter sp. (strai... [more]
DNAJ_SYNFM5.862e-1651.39Chaperone protein dnaJ OS=Syntrophobacter fumaroxi... [more]
DNAJ_PSYA25.862e-1652.11Chaperone protein dnaJ OS=Psychrobacter arcticus (... [more]
DNAJ_CLOPE5.862e-1653.52Chaperone protein dnaJ OS=Clostridium perfringens ... [more]
DNAJ_EHRRW7.656e-1654.93Chaperone protein dnaJ OS=Ehrlichia ruminantium (s... [more]
DNAJ_EHRRG7.656e-1654.93Chaperone protein dnaJ OS=Ehrlichia ruminantium (s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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