CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO27 (Chaperone protein dnaJ OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.067e-13
Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++D YE+LGVS+   ++EIK AY+++A+KYHPD+N  D  A   FKE+  +Y +L+D  KR  YD  G  A
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ECO24 (Chaperone protein dnaJ OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.067e-13
Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++D YE+LGVS+   ++EIK AY+++A+KYHPD+N  D  A   FKE+  +Y +L+D  KR  YD  G  A
Sbjct:    3 KQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMHC (Chaperone protein dnaJ OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.067e-13
Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 3
Query:  294 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            D YE+LGV ++    EIK A+RK+ALKYHPD+NA D  A + FKE+  +Y +L + ++R+ YD  G E +
Sbjct:    3 DYYEILGVPKDADSDEIKKAFRKLALKYHPDRNAGDKEAEEKFKEINEAYQVLGNDERRQTYDRYGKEGL 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNJ5B_MOUSE (DnaJ homolog subfamily C member 5B OS=Mus musculus GN=Dnajc5b PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13
Identity = 38/84 (45.24%), Postives = 56/84 (66.67%), Query Frame = 3
Query:  240 PAQRSKSERTDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            P QR ++  T +G+ L    YE+LG+ +  + +EIK  YRK+AL++HPDKN +DP AA+ FKE+  ++ IL+D  KR  YD  G
Sbjct:    6 PNQRQRTLST-SGESL----YEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDTSKRNIYDKYG 84          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJA (Chaperone protein dnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13
Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            + RD YE+LGVSR+ + +EIK AYR++A KYHPD N  +P A D FKE+  +Y +LSD + R +YD  G
Sbjct:    1 MARDYYEILGVSRDSSKEEIKRAYRRLARKYHPDVN-KEPGAEDRFKEINRAYEVLSDDELRARYDRFG 68          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_OCHA4 (Chaperone protein dnaJ OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13
Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++ D YE LGV R   D+ +K+A+RK+A++YHPD+N N+P A   FKE+  +Y  L DP KR  YD  G  A
Sbjct:    1 MKIDYYEALGVERTADDKVLKTAFRKLAMEYHPDRNPNNPEAERKFKEIGEAYETLKDPQKRAAYDRFGHAA 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_MESSB (Chaperone protein dnaJ OS=Mesorhizobium sp. (strain BNC1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13
Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++ D YE L VSRN  ++E+KSA+RK+A++YHPD+N  D  A   FKE+  +Y  L DP KR  YD  G  A
Sbjct:    1 MKADFYETLCVSRNADEKELKSAFRKLAMQYHPDRNPGDMEAEKKFKEINEAYETLRDPQKRAAYDRFGHAA 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_FUSNN (Chaperone protein dnaJ OS=Fusobacterium nucleatum subsp. nucleatum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13
Identity = 38/76 (50.00%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDK--NANDPVAADI---FKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLG+ ++ ++ +IK AYRK A+KYHPDK  NA+D    D    FKE+  +Y ILSD  K++QYD  G  A
Sbjct:    3 KRDYYEVLGIDKSASENDIKKAYRKAAMKYHPDKFANASDAEKKDAEEKFKEINEAYQILSDSQKKQQYDQFGHAA 78          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ2_SYNY3 (Chaperone protein dnaJ 2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGF 494
            R+ Y++LGV RN T +EIK ++RK+A +YHPD N ND  A + FK++  +Y++LSD  KRR+ D+  F
Sbjct:    5 RNYYQILGVPRNATAEEIKKSFRKLARQYHPDVNPNDKTAEEKFKDINEAYDVLSDETKRRELDSRLF 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13
Identity = 35/71 (49.30%), Postives = 53/71 (74.65%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +D Y VLG++RN  D +IK AYR++ALK+HP K +N+P +A+IF+++  +Y++LSDP KR  YD  G E +
Sbjct:    3 QDYYSVLGITRNSEDAQIKQAYRRLALKHHPLK-SNEPSSAEIFRQIAEAYDVLSDPMKRGIYDKFGEEGL 72          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ECO276.067e-1346.48Chaperone protein dnaJ OS=Escherichia coli O127:H6... [more]
DNAJ_ECO246.067e-1346.48Chaperone protein dnaJ OS=Escherichia coli O139:H2... [more]
DNAJ_CAMHC6.067e-1347.14Chaperone protein dnaJ OS=Campylobacter hominis (s... [more]
DNJ5B_MOUSE7.923e-1345.24DnaJ homolog subfamily C member 5B OS=Mus musculus... [more]
DNAJ_SYNJA7.923e-1352.17Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_OCHA47.923e-1347.22Chaperone protein dnaJ OS=Ochrobactrum anthropi (s... [more]
DNAJ_MESSB7.923e-1348.61Chaperone protein dnaJ OS=Mesorhizobium sp. (strai... [more]
DNAJ_FUSNN7.923e-1350.00Chaperone protein dnaJ OS=Fusobacterium nucleatum ... [more]
DNAJ2_SYNY37.923e-1348.53Chaperone protein dnaJ 2 OS=Synechocystis sp. (str... [more]
DJB13_HUMAN7.923e-1349.30DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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