CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_AERS4 (Chaperone protein dnaJ OS=Aeromonas salmonicida (strain A449) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12
Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGVS+   ++EIK AY+ +A+K+HPD+N  D  + + FKEV  +Y IL+D + R +YD  G   V
Sbjct:    3 KRDFYEVLGVSKGADEREIKKAYKPLAMKFHPDRNQGDAASEEKFKEVKEAYEILTDENLRARYDQYGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACICJ (Chaperone protein dnaJ OS=Acidiphilium cryptum (strain JF-5) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            + D YE+LGVSR  +  E+K AYRK+A++YHPD+N  D  A   FK++  +Y++L D  KR  YD  G  A
Sbjct:    3 KTDYYELLGVSRGASADELKKAYRKLAMQYHPDRNPGDAAAEQKFKDINEAYDVLKDEQKRAAYDRFGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACAM1 (Chaperone protein dnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12
Identity = 40/102 (39.22%), Postives = 53/102 (51.96%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLG 590
            + RD Y++LGVSR+    E+K +YR++A KYHPD N  +P A D FKE+  +Y  LSDP  R +YD  G   V              G    +F   FS  G
Sbjct:    1 MARDYYDILGVSRSADPDELKRSYRRLARKYHPDVN-KEPGAEDKFKEINKAYETLSDPQMRGRYDQFGEAGVSSAAGAGYQDFGDFGGFADIFETFFSGFG 101          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  300 YEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            Y++LGV    ++ E+K AYRK+A +YHPDKN N   A D FKE++F+Y +LS+P+KR  YD  G
Sbjct:   10 YDILGVPPGASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLSNPEKRELYDRYG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  300 YEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            Y++LGV    ++ E+K AYRK+A +YHPDKN N   A D FKE++F+Y +LS+P+KR  YD  G
Sbjct:   10 YDILGVPPGASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLSNPEKRELYDRYG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  300 YEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            Y++LGV    ++ E+K AYRK+A +YHPDKN N   A D FKE++F+Y +LS+P+KR  YD  G
Sbjct:   10 YDILGVPPGASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLSNPEKRELYDRYG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3
Query:  300 YEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            Y++LGV    ++ E+K AYRK+A +YHPDKN N   A D FKE++F+Y +LS+P+KR  YD  G
Sbjct:   10 YDILGVPPGASENELKKAYRKLAKEYHPDKNPN---AGDKFKEISFAYEVLSNPEKRELYDRYG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLSU (Chaperone protein dnaJ OS=Wolinella succinogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 3
Query:  294 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            D YE+L + R+ + +EIK AYRKMA+KYHPD+N     A ++FK V  +Y +LSD  KR+ YD  G
Sbjct:    5 DYYEILEIERSASGEEIKKAYRKMAMKYHPDRNEGSSEAEEMFKRVNEAYQVLSDEGKRQLYDRYG 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_SHIFL (Chaperone protein dnaJ OS=Shigella flexneri GN=dnaJ PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++D YE+LGVS+   ++EI+ AY+++A+KYHPD+N  D  A   FKE+  +Y +L+D  KR  YD  G  A
Sbjct:    3 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_SHIF8 (Chaperone protein dnaJ OS=Shigella flexneri serotype 5b (strain 8401) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 32/71 (45.07%), Postives = 48/71 (67.61%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++D YE+LGVS+   ++EI+ AY+++A+KYHPD+N  D  A   FKE+  +Y +L+D  KR  YD  G  A
Sbjct:    3 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 73          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_AERS41.035e-1247.22Chaperone protein dnaJ OS=Aeromonas salmonicida (s... [more]
DNAJ_ACICJ1.035e-1246.48Chaperone protein dnaJ OS=Acidiphilium cryptum (st... [more]
DNAJ_ACAM11.035e-1239.22Chaperone protein dnaJ OS=Acaryochloris marina (st... [more]
DNJA2_RAT1.351e-1251.56DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE1.351e-1251.56DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_HUMAN1.351e-1251.56DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN1.351e-1251.56DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNAJ_WOLSU1.351e-1250.00Chaperone protein dnaJ OS=Wolinella succinogenes G... [more]
DNAJ_SHIFL1.351e-1245.07Chaperone protein dnaJ OS=Shigella flexneri GN=dna... [more]
DNAJ_SHIF81.351e-1245.07Chaperone protein dnaJ OS=Shigella flexneri seroty... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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