CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BREBN (Chaperone protein dnaJ OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFE 497
            ++RD YEVLGV+++    EIK AYRK+A +YHPD N  +  A + FKEV  +Y+ILS+P KR QYD  G +
Sbjct:    1 MKRDLYEVLGVAKDADADEIKKAYRKLARQYHPDVN-KEADAEEKFKEVKDAYDILSEPQKRAQYDRFGHQ 70          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ALCBS (Chaperone protein dnaJ OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLG +++ + Q++K AYR++A+KYHPD+N +D  A   FKE   +Y +L+D  KR  YD  G   V
Sbjct:    3 KRDYYEVLGAAKDASAQDLKKAYRRLAMKYHPDRNPDDKEALAKFKEAKEAYEVLADEQKRAAYDQFGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ACTSZ (Chaperone protein dnaJ OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++D YE+LGV R   ++ IK AY+++A+KYHPD+   D  + + FKE+  +Y ILSD +KR  YD  G  A
Sbjct:    3 KQDYYEILGVERGADEKAIKKAYKRLAMKYHPDRTKGDKTSEEKFKEINEAYEILSDKEKRAAYDQYGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: XDJ1_YEAST (DnaJ protein homolog XDJ1 OS=Saccharomyces cerevisiae GN=XDJ1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 3
Query:  267 TDAGKQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNAND---PVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            +D G +L    Y+VLGV+R+ T QEIK+AYRK+ALK+HPDK  +     V    FKE+T +Y ILSDP+K+  YD  G
Sbjct:    4 SDRGDRL----YDVLGVTRDATVQEIKTAYRKLALKHHPDKYVDQDSKEVNEIKFKEITAAYEILSDPEKKSHYDLYG 77          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNJA3_MOUSE (DnaJ homolog subfamily A member 3, mitochondrial OS=Mus musculus GN=Dnaja3 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 3
Query:  294 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYD---TAGFE 497
            D Y++LGV RN + ++IK AY ++A KYHPD N +DP A + F ++  +Y +LSD  KR+QYD   +AGF+
Sbjct:   93 DYYQILGVPRNASQKDIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFD 163          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_WIGBR (Chaperone protein dnaJ OS=Wigglesworthia glossinidia brevipalpis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 31/71 (43.66%), Postives = 50/71 (70.42%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            + D Y++LG+S+N +D+EIK+AY+++A+K+HPD+N  +  A   FKE+  +Y +L DP KR  Y+  G  A
Sbjct:    3 KSDYYDILGISKNASDREIKTAYKRLAVKFHPDRNPGNLEAESKFKEIKEAYEVLLDPKKRAAYNQYGHTA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_THEEB (Chaperone protein dnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            + RD YE+LGVSR+   +E+K AYR++A KYHPD N  +P A + FKE+  +Y +LSDP  R  YD  G
Sbjct:    1 MARDFYEILGVSRSADAEELKRAYRRLARKYHPDVN-KEPGAEEKFKEINRAYEVLSDPQARANYDRFG 68          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_RHOBA (Chaperone protein dnaJ OS=Rhodopirellula baltica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 3
Query:  300 YEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            YEVL V R  T Q++  AYRK+A+KYHPD N +D  A   FKE T +Y +LSD +KR +YD  G   V
Sbjct:    8 YEVLKVERTATKQQVDRAYRKLAIKYHPDSNRDDGSATAKFKEATEAYEVLSDANKRARYDQYGHAGV 75          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_ORITB (Chaperone protein dnaJ OS=Orientia tsutsugamushi (strain Boryong) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 48/139 (34.53%), Postives = 62/139 (44.60%), Query Frame = 3
Query:  294 DPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA------------------VXXXXXXXXXXXXXXGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGMVTV 656
            D Y+VLGVSR  + +EIK AYRK+ LKYHPD N  D  A    K +  +Y+IL D  KR  YD  G +A                  +              GA  +   A   K G  +K  +S T LEEA  G+  +
Sbjct:    5 DYYQVLGVSRTASQEEIKRAYRKLVLKYHPDHNPGDKNAEQKIKNINEAYDILKDEKKRSAYDQLGHQAFKNSGGGNYQQHHGFTGGIDPNDIFENIFGDFMGARRSSKTAFSKKAGANLKYDISLT-LEEAFYGVTKI 142          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_METPP (Chaperone protein dnaJ OS=Methylibium petroleiphilum (strain PM1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPV--AADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YE LGV++N ++++IK AYRK+A+K+HPD+N  D    A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYETLGVAKNASEEDIKKAYRKLAMKHHPDRNQGDGAKKAEESFKEAKEAYEMLSDAQKRAAYDQYGHAGV 76          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BREBN1.351e-1252.11Chaperone protein dnaJ OS=Brevibacillus brevis (st... [more]
DNAJ_ALCBS1.351e-1245.83Chaperone protein dnaJ OS=Alcanivorax borkumensis ... [more]
DNAJ_ACTSZ1.351e-1245.07Chaperone protein dnaJ OS=Actinobacillus succinoge... [more]
XDJ1_YEAST1.765e-1251.28DnaJ protein homolog XDJ1 OS=Saccharomyces cerevis... [more]
DNJA3_MOUSE1.765e-1247.89DnaJ homolog subfamily A member 3, mitochondrial O... [more]
DNAJ_WIGBR1.765e-1243.66Chaperone protein dnaJ OS=Wigglesworthia glossinid... [more]
DNAJ_THEEB1.765e-1250.72Chaperone protein dnaJ OS=Thermosynechococcus elon... [more]
DNAJ_RHOBA1.765e-1251.47Chaperone protein dnaJ OS=Rhodopirellula baltica G... [more]
DNAJ_ORITB1.765e-1234.53Chaperone protein dnaJ OS=Orientia tsutsugamushi (... [more]
DNAJ_METPP1.765e-1247.30Chaperone protein dnaJ OS=Methylibium petroleiphil... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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