CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_THETN (Chaperone protein dnaJ OS=Thermoanaerobacter tengcongensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.306e-15
Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++D YE+LGV RN + +EIK AYR++A KYHPD N  D  A   FKE+  +Y ILSDP KR QYD  G  A
Sbjct:    3 KKDLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_METTE (Chaperone protein dnaJ OS=Methanosarcina thermophila GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.306e-15
Identity = 38/71 (53.52%), Postives = 54/71 (76.06%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            RD YE+LG+SR+ T ++IK +YRK+ALKYHPD+N  +P A + FKE++ +Y +LSDP+KR QYD  G   +
Sbjct:    5 RDYYEILGLSRDATPEDIKKSYRKLALKYHPDRN-KEPGAEEKFKEISEAYAVLSDPEKRAQYDRFGHAGI 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_HERAR (Chaperone protein dnaJ OS=Herminiimonas arsenicoxydans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.306e-15
Identity = 41/101 (40.59%), Postives = 57/101 (56.44%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAVXXXXXXXXXXXXXXGAVNTMFAALFSKLG 590
            +RD YE+LG+ +N +D+EIK AYRK+A+K+HPD+N +   A D FKE   +Y +LSDP KR  YD  G   V               A   +F  +F + G
Sbjct:    3 KRDFYEILGLGKNASDEEIKKAYRKLAMKHHPDRNPDSKGAEDKFKEAKEAYEMLSDPQKRDAYDRYGHAGVDPNMGGGGGGGGFADAFGDIFGDIFGQAG 103          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.706e-15
Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV +N +D EIK AYRK+A+K+HPD+N ++  A + FKEV  +Y +LSDP+K+  YD  G   V
Sbjct:    3 KRDYYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDNKEAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_METSS (Chaperone protein dnaJ OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.706e-15
Identity = 37/72 (51.39%), Postives = 52/72 (72.22%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            ++D YEVLGV+R+ +D+EIK +YRK+A+KYHPD+N ++P A + FKE   +Y +LSD  KR  YD  G   V
Sbjct:    3 KKDYYEVLGVNRDASDEEIKKSYRKLAMKYHPDRNPDNPKAEESFKEAKEAYEVLSDEQKRAAYDQYGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_HAHCH (Chaperone protein dnaJ OS=Hahella chejuensis (strain KCTC 2396) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.706e-15
Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGVSR+   +E+K AYR++A+KYHPD+N  D  A ++FKE T +Y++LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVSRDVDGKEVKKAYRRLAMKYHPDRNPGDASAEEMFKEATEAYDVLSDDQKRAAYDQFGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHY (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain Y51) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.706e-15
Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++RD YEVLGVS++  +QEIK AYRK+A +YHPD N  D  A + FKE T +Y++LSD +KR +YD  G  A
Sbjct:    1 MKRDYYEVLGVSKSADEQEIKKAYRKLARQYHPDVNPGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSA 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHD (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.706e-15
Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 3
Query:  285 LRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++RD YEVLGVS++  +QEIK AYRK+A +YHPD N  D  A + FKE T +Y++LSD +KR +YD  G  A
Sbjct:    1 MKRDYYEVLGVSKSADEQEIKKAYRKLARQYHPDVNPGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSA 72          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CALS8 (Chaperone protein dnaJ OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.706e-15
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            ++D YE+LGV RN T +EIK AYR++A +YHPD N  +  A + FKE+  +Y +LSDP+KRR+YD  G  A
Sbjct:    4 KKDYYEILGVPRNATQEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRRKYDQFGHAA 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNJC7_SCHPO (DnaJ homolog subfamily C member 7 homolog OS=Schizosaccharomyces pombe GN=SPBC543.02c PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.228e-15
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 3
Query:  279 KQLRRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDT 485
            K  R+D Y++LGVS+  TD EIK AYRK+AL YHPDKNA +  A   FKEV  +Y ILSDP+ RR++D+
Sbjct:  344 KSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRRRFDS 412          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_THETN1.306e-1554.93Chaperone protein dnaJ OS=Thermoanaerobacter tengc... [more]
DNAJ_METTE1.306e-1553.52Chaperone protein dnaJ OS=Methanosarcina thermophi... [more]
DNAJ_HERAR1.306e-1540.59Chaperone protein dnaJ OS=Herminiimonas arsenicoxy... [more]
DNAJ_RALME1.706e-1552.78Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]
DNAJ_METSS1.706e-1551.39Chaperone protein dnaJ OS=Methylovorus sp. (strain... [more]
DNAJ_HAHCH1.706e-1552.78Chaperone protein dnaJ OS=Hahella chejuensis (stra... [more]
DNAJ_DESHY1.706e-1554.17Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]
DNAJ_DESHD1.706e-1554.17Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]
DNAJ_CALS81.706e-1552.11Chaperone protein dnaJ OS=Caldicellulosiruptor sac... [more]
DNJC7_SCHPO2.228e-1557.97DnaJ homolog subfamily C member 7 homolog OS=Schiz... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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