CK934573

Overview
NameCK934573
Unique NameCK934573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_BURM1 (Chaperone protein dnaJ OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV++N +D EIK AYRK+A+KYHPD+N ++  A + FKEV  +Y +LSD  KR  YD  G   V
Sbjct:    3 KRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEVKEAYEMLSDSQKRAAYDQYGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DJB12_MOUSE (DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.909e-15
Identity = 40/80 (50.00%), Postives = 61/80 (76.25%), Query Frame = 3
Query:  258 SERTDAGKQLR--RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            SE+  A K+++  +D YE+LGVSR+ +D+++K AYRK+ALK+HPDKN + P A + FK +  +Y +LS+P+KR+QYD  G
Sbjct:   97 SEQVAAVKRVKQCKDYYEILGVSRSASDEDLKKAYRKLALKFHPDKN-HAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG 175          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBHB (Chaperone protein dnaJ OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGV R+ ++++IK AY+++A+K+HPD+N  D  AAD FKEV  +Y IL+DP K+  YD  G  A
Sbjct:    3 KRDFYEVLGVGRDASERDIKKAYKRLAMKFHPDRNQGDESAADKFKEVKEAYEILTDPQKKAAYDQYGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_STRMK (Chaperone protein dnaJ OS=Stenotrophomonas maltophilia (strain K279a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGV+R  TD E+K AYR+ A+K+HPD+N  D  A   FKE   +Y +LSD +KRR YD+ G  A
Sbjct:    3 KRDYYEVLGVARTATDDELKKAYRRCAMKFHPDRNPGDAAAEASFKECKEAYEVLSDGNKRRMYDSHGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRCJ (Chaperone protein dnaJ OS=Ehrlichia canis (strain Jake) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15
Identity = 39/71 (54.93%), Postives = 50/71 (70.42%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            + D YE+LGVS+N T +EIK AYRKMALKYHPD N  +  A + FKE++ +Y++L D DKR  YD  G  A
Sbjct:    3 KSDYYELLGVSKNATSEEIKKAYRKMALKYHPDTNPGNKEAEEKFKELSEAYDVLIDQDKRAAYDKYGHNA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTH (Chaperone protein dnaJ OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.800e-15
Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YE+LGV R  +D EIK AYRK+A +YHPD N  D  A   FKE+  +Y +LSDP KR +YD  G  A
Sbjct:    4 KRDYYEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKRARYDQFGHSA 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_VIBF1 (Chaperone protein dnaJ OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEA 500
            +RD YEVLGVSR+ ++++IK AY+++A+K+HPD+N  D  AA+ FKEV  +Y IL+D  KR  YD  G  A
Sbjct:    3 KRDFYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDDTAAEKFKEVKVAYEILTDAQKRSAYDQYGHAA 73          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_RALSO (Chaperone protein dnaJ OS=Ralstonia solanacearum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV +N +D EIK AYRK+A+KYHPD+N +   A + FKE   +Y +LSD DK+  YD  G   V
Sbjct:    3 KRDYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEMLSDADKKAAYDQYGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_RALPJ (Chaperone protein dnaJ OS=Ralstonia pickettii (strain 12J) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 38/72 (52.78%), Postives = 49/72 (68.06%), Query Frame = 3
Query:  288 RRDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAGFEAV 503
            +RD YEVLGV +N +D EIK AYRK+A+KYHPD+N +   A D FKE   +Y +LSD +K+  YD  G   V
Sbjct:    3 KRDYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDSKEAEDKFKEAKEAYEMLSDAEKKAAYDQYGHAGV 74          
BLAST of CK934573 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPIN (Chaperone protein dnaJ OS=Leptospira interrogans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.963e-15
Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 3
Query:  291 RDPYEVLGVSRNCTDQEIKSAYRKMALKYHPDKNANDPVAADIFKEVTFSYNILSDPDKRRQYDTAG 491
            R  Y++LGVS++  D+EIKSAYRK+A+KYHPDKN  +  + + FKE T +Y IL DP KR+ YD  G
Sbjct:    4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFG 70          
The following BLAST results are available for this feature:
BLAST of CK934573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_BURM12.909e-1554.17Chaperone protein dnaJ OS=Burkholderia multivorans... [more]
DJB12_MOUSE2.909e-1550.00DnaJ homolog subfamily B member 12 OS=Mus musculus... [more]
DNAJ_VIBHB3.800e-1552.11Chaperone protein dnaJ OS=Vibrio harveyi (strain A... [more]
DNAJ_STRMK3.800e-1553.52Chaperone protein dnaJ OS=Stenotrophomonas maltoph... [more]
DNAJ_EHRCJ3.800e-1554.93Chaperone protein dnaJ OS=Ehrlichia canis (strain ... [more]
DNAJ_CLOTH3.800e-1553.52Chaperone protein dnaJ OS=Clostridium thermocellum... [more]
DNAJ_VIBF14.963e-1552.11Chaperone protein dnaJ OS=Vibrio fischeri (strain ... [more]
DNAJ_RALSO4.963e-1552.78Chaperone protein dnaJ OS=Ralstonia solanacearum G... [more]
DNAJ_RALPJ4.963e-1552.78Chaperone protein dnaJ OS=Ralstonia pickettii (str... [more]
DNAJ_LEPIN4.963e-1555.22Chaperone protein dnaJ OS=Leptospira interrogans G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934573 ID=CK934573; Name=CK934573; organism=Citrus sinensis; type=EST; length=897bp
GGGGGCTTTTGTCCTCTTCAGCAACAGCTTGGATGTTCCATCAAGTCTAG
TCTAGGGTTTCCTTATTCTTTTCTCACCAGTCTGTTATTTTTCCGAGAAA
AGATTAAGAAAAAAAATGCGAGAGAATTTGGGAGGAGTAATTGTTTGTTT
TTCGTTTTCGTCTAAAAAAAATTTTCTGTCTCGGTAGTGGTTTCTAGGGC
CTTTGAGTGGAGTTTTTTCACGTTCTTTTATTGAAAATGCCGGCTCAACG
ATCCAAGTCCGAGAGAACCGATGCGGGAAAGCAGCTCCGGCGGGATCCCT
ACGAGGTTCTCGGCGTCTCCAGGAACTGTACGGATCAAGAAATCAAGAGC
GCCTACAGGAAAATGGCTCTCAAGTACCATCCTGATAAGAATGCAAATGA
CCCTGTAGCAGCTGATATTTTTAAGGAGGTTACATTTTCCTATAATATCT
TGTCAGATCCTGACAAAAGACGACAGTATGACACTGCTGGTTTTGAGGCT
GTTGAATCAGAAAGTCAAGAATTGGAGCTAGATCTTTCTAGTTTGGGAGC
TGTGAACACCATGTTTGCTGCACTTTTTAGTAAACTTGGTGTGCCAATCA
AGACCACTGTATCGGCTACTGTCTTGGAGGAGGCACTTAATGGCATGGTT
ACTGTTCGTCCACTACTGTTTGATCAACATATAACCAGGAAGGTTGAAAA
GCAATGTGCTCACTTCTATTCTGTTACAATAACAGAAGAGGAAGCACGGG
CTGGATTCGTGTGCCGAGTGCAATCATCTGACAAAAGCAAATTCAAGTTA
TTGTACTTTGATCGGGAAGGGACTGGTGGACTGAGCCTTGCACTTCANGG
AGATTGCACAAAAACTGGGAAGGGTACATNNNNNGGCATGTATTTTC
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