CK934576

Overview
NameCK934576
Unique NameCK934576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 7.356e-66
Identity = 126/221 (57.01%), Postives = 149/221 (67.42%), Query Frame = 3
Query:   60 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKFI 722
            MK   FL               +DP  LQD CV +N P DGVFVNGKFCKDPKL   EDFFF+GL +      + G + T  NV  +PGLNTLGIS  RIDY  YGQ PPH HPRA+++  V  GTL+VGFVTS+   N L +K L +GDVFVFP+GLIHFQ N+GK  A A++ L+SQ PG +TIADTVFG+NP I+P FL  AF +DPKIV DLQ KFI
Sbjct:    1 MKSFSFLAVLSILAITLSLSKASDPSSLQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNP-ENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQIDPSFLASAFQVDPKIVMDLQTKFI 220          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 8.133e-65
Identity = 128/222 (57.66%), Postives = 153/222 (68.92%), Query Frame = 3
Query:   54 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            + MK + FL               +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFFSGL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRAT+I +V +GTL VGFVTS+  +N L +KVLN+GDVFVFP GLIHFQ NIGK  A A++AL+SQ PG +TIA+TVFGANP+INP  L KAF L+P++V DLQ KF
Sbjct:    1 MAMKSLSFLAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.036e-64
Identity = 127/222 (57.21%), Postives = 150/222 (67.57%), Query Frame = 3
Query:   54 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            + MK + FL               +DP  LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFF GL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRAT+I +V  GTL VGFVTS+  +N L  KVLN+GDVFVFP GLIHFQ NIGK  A A++AL+SQ PG +TIA TVFGANP+INP+ L KAF +DP++V DLQ KF
Sbjct:    1 MAMKSLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIAPTVFGANPAINPNILAKAFQVDPRVVMDLQTKF 221          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.416e-62
Identity = 118/199 (59.30%), Postives = 144/199 (72.36%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            +DP  LQD C+ +N P + +FVNGKFCKDPKL  A+DF+FSGL K   T ++ +G + T  NV QIPGLNTLGIS  RIDY   GQ PPH HPRAT+I LV EGTL+VGF +S    N L  K LNKGDVFVFP GLIHFQ NIGK  A A+++L+SQ PG + I +T+FG+ P I+P+ L KAF LDPK++  LQ KF
Sbjct:   25 SDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKF 222          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.073e-60
Identity = 117/197 (59.39%), Postives = 140/197 (71.07%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            DP  LQD CVA N   + VFVNGKFCKDPKL  A DFF+SGL  PGNT+NRLG   TD +V +IPGLNTLGI+  R+D+AP GQ PPHIHPRA++I LVL+G L VGFV+S+  N TL +K+L  GDVF FP GL+ F  N GKT+A A   + SQ PG + I D VFG+NP I+P  L KAF LD  IV+ +Q  F
Sbjct:   26 DPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAFALDVNIVRHVQRVF 221          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.877e-60
Identity = 120/198 (60.61%), Postives = 139/198 (70.20%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            +DP  LQD CVA  D    V VNG  CKDP     EDFFFSGL   GNT+NR G   T  NV QI GLNTLGIS  R+DYAPYG  PPHIHPRAT+I  +LEG+LYVGFVTS+   N L  KVLNKGDVFVFP+GLIHFQFN G  +  A +AL+SQ PG +TIA+ VFG+ P I+ D L KAF ++ KIV  +Q +F
Sbjct:   22 SDPSQLQDFCVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAFQVEKKIVDRIQAQF 216          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.993e-59
Identity = 118/198 (59.60%), Postives = 140/198 (70.71%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            +DP HLQD+CVA  D    V VNG  CKD +   AEDFFFSGL   GNT N+ G   T  NV Q+PGLNTLGIS  RIDYA +G  PPH HPRAT+I  VLEG+LYVGFVTS+   N L  KV+NKGDVFVFP+GL+HFQFN G T+A A  AL+SQ PG +T+A+ VFG+ PSI  D L KAF ++  +V  +Q KF
Sbjct:   29 SDPSHLQDLCVA--DKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNP-ENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAKAFQVEKTVVDQIQAKF 223          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.152e-57
Identity = 116/198 (58.59%), Postives = 137/198 (69.19%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            +DPG LQD CV   D    V VNG  CKD K   A DFFFSGL   GNT N+ G + T  NV QIPGLNT+G+S  RIDYAP G  PPH HPRAT+I  VLEG+LYVGFV S+   N L  KVLNKGDVFVFP+GL+HFQFN G  NA A +AL+SQ PG +T+ + VFG+ PSI+ D L KAF +D  I+  +Q +F
Sbjct:   29 SDPGLLQDFCVV--DKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVISNP-ENKLFTKVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAVFGSKPSISDDILAKAFQVDKNIIDRIQAQF 223          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.391e-56
Identity = 113/197 (57.36%), Postives = 138/197 (70.05%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            DP  LQD CVA ++  + VFVNGKFCKDPK   A DF +SGL    NT N LG + T  +V +IPGLNTLG+S  R+D+A  GQ PPHIHPRAT+I +V +G L VGFV+S+Q NN L  KVL +GDVFVFP GLIHFQ N+ +T A A++   SQ PG + IAD VFG+NPSI  + L KAF LD K+V+ L   F
Sbjct:   27 DPNPLQDFCVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQLDVKLVRFLHIVF 222          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.901e-56
Identity = 113/197 (57.36%), Postives = 138/197 (70.05%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            DP  LQD CVA+ + K+GVFVNG+FCKDPKL  ++DFF SGL  PGNT  RLG     AN   IPGLNTLG+   RID+AP G  PPHIHPRA++I LV++G L VGFV+S+  N TL +K+L  GDVFV P GL+ F  NIGKTNA A  A+ SQ PG +++ D VFG+ P I+P  L KAF LD  IV+ L+  F
Sbjct:   26 DPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPAN---IPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVRYLRKVF 218          
The following BLAST results are available for this feature:
BLAST of CK934576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL19_ARATH7.356e-6657.01Putative germin-like protein subfamily 1 member 9 ... [more]
GL111_ARATH8.133e-6557.66Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL110_ARATH4.036e-6457.21Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL112_ARATH8.416e-6259.30Putative germin-like protein subfamily 1 member 12... [more]
GL12_ARATH2.073e-6059.39Putative germin-like protein subfamily 1 member 2 ... [more]
GL21_ORYSJ7.877e-6060.61Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL23_ORYSJ2.993e-5959.60Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL22_ORYSJ8.152e-5758.59Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GL16_ARATH1.391e-5657.36Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL13_ARATH6.901e-5657.36Germin-like protein subfamily 1 member 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934576 ID=CK934576; Name=CK934576; organism=Citrus sinensis; type=EST; length=722bp
GGGGAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGAC
TTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGC
TTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATG
TCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAG
TTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGG
GCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAG
ATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCA
TTCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCC
CCGTGCCACCAAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTT
TTGTGACATCACACCAACTGAATAACACACTCATCGCAAAAGTTCTAAAT
AAGGGAGATGTTTTTGTGTTTCCACGAGGTTTGATTCACTTCCAATTCAA
CATTGGAAAAACAAATGCATCTGCCTATTCTGCTCTAAACAGCCAATTCC
CGGGTGAAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATC
AATCCCGATTTTCTTGGCAAGGCATTCCACTTGGACCCAAAGATAGTGAA
AGATCTTCAAAATAAGTTCATT
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