CK934576

Overview
NameCK934576
Unique NameCK934576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30
Identity = 73/190 (38.42%), Postives = 112/190 (58.95%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPK-DGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGK-TNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLD 686
            +DP  LQD CV+        +F+NGK CKDP  A   DF  S L +PGNT  +   ++ T      +PGLNT+G++  R+D+   G  PPH+HPRA+++ + L+G L VGFV +   +  +  + L+ G+ FVFP+GLIHF +NI   ++A A S L+SQ PG   ++ + F + P    + L  A+ ++
Sbjct:   18 SDPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDIN 204          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.472e-29
Identity = 82/190 (43.16%), Postives = 103/190 (54.21%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQ 710
            +QD CVA  + K      G  C  P   +A DF FSGLG PGNT N +    T A   Q PGLN LG+S  R+D AP G  P H HP A+++  VL G++  GFV+S    N +  + L  G V VFP+GL+HFQ N GK++ASA    NS  PG + I D    AN       +G  F LD   VK L+
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSS---ANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPG-LQILDFALFANSLPTELVVGTTF-LDATTVKKLK 201          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.472e-29
Identity = 79/195 (40.51%), Postives = 104/195 (53.33%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQ 710
            T    +QD CVA     DG    G  CK P +    DF +SGLG  GNT N      T A   Q PG+N LGIS  R+D  P G  P H HP A+++ LV++GT+  GFV S   +NT   K L KGD+ VFP+GL+HFQ N G T A A+ + +S  PG + I D     N  +  + + +   LD   +K L+
Sbjct:   15 TSHASVQDFCVADYKAPDGPA--GYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVAS---DNTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPG-LQIVDFALFKN-DLATELIAQTTLLDAPQIKKLK 202          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.392e-29
Identity = 78/190 (41.05%), Postives = 103/190 (54.21%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQ 710
            +QD CVA     DG    G  CK P      DF +SGLG  GNT N +    T A   Q PG+N LGIS  R+D  P G  P H HP A+++ LV++GT+  GFV S   +NT   K L KGD+ VFP+GL+HFQ N G T A A+ + +S  PG + I D     N  +  + + +   LD   +K L+
Sbjct:   20 VQDFCVADYKAPDGPA--GYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVAS---DNTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPG-LQILDFALFKN-DLPTELIAQTTFLDAAQIKKLK 202          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27
Identity = 70/169 (41.42%), Postives = 98/169 (57.99%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFG 635
            D  ++QD C      +   F+NG  CK+P    A+DF  + L + G+T N L  + T     + PGLNTLG+S  R D    G  P H HPR++++  V++G ++ GFV +   NN +   VL KGDVFVFP+GL+HF  + G   A+A+S  NSQ PG V I + VFG
Sbjct:   19 DSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDT---NNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNIGE-VFG 183          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27
Identity = 76/190 (40.00%), Postives = 105/190 (55.26%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQ 710
            +QD CVA     +G    G  CK P   +  DF FSGLG  GNT+N +    T A V Q PG+N LGIS  R+D A  G  P H HP A+++ +V +GT+  GFV S   +NT   + L KGD+ VFP+GL+HFQ N G+  A A+++  S  PG + I D     N  +  + + +   LD   +K L+
Sbjct:   25 VQDFCVADLAAPEGPA--GFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVAS---DNTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPG-LQILDFALFKN-DLPTEVIAQTTFLDAAQIKKLK 207          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.021e-27
Identity = 67/155 (43.23%), Postives = 90/155 (58.06%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPG 605
            +QD CVA  DPK     +G  CK+P      DF F+GLG  GNT+N +    T A      G+N LG+S  R+D A  G  P H HP A+++ +V++GT+  GF++S    N +  K LN+GD  VFP+GL+HFQ N GK  A A+ A  S  PG
Sbjct:   22 VQDFCVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPG 171          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.946e-27
Identity = 68/155 (43.87%), Postives = 90/155 (58.06%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPG 605
            +QD CVA  DPK     +G  CK+P      DF FSGLGK GNT+N +    T A      GLN L +S  R+D A  G  P H HP A+++ +V++GT+  GF++S    N +  K L++GD  VFP+GL+HFQ N GK  A A+ A  S  PG
Sbjct:   22 VQDFCVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISS---ANKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPG 171          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27
Identity = 77/190 (40.53%), Postives = 104/190 (54.74%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQ 710
            +QD CVA  + K      G  C  P   +A DF FS LG PGNT N +    T   V Q P LN LGIS  R+D AP G  P H HP A+++  VL+G++  GF++S    N++  + L  G V VFP+GL+HFQ N GKT A+A    +S  PG + I D    AN +++ + +     L P  VK L+
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISS---ANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPG-LQILDFALFAN-TLSTELVSATTFLPPATVKTLK 200          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26
Identity = 69/175 (39.43%), Postives = 90/175 (51.43%), Query Frame = 3
Query:  126 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSI 650
            +D   LQDVC      +  +F+NG FCK P    A DF    L   G+  N +          + PGLNTLGIS  R D A  G   PH HPRA+++  V  G++  GF  +      L  K L +GDVF+FPRGL+HF  N G   A+ +S LNSQ PG V I   +F  +  +
Sbjct:   23 SDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAPDSEV 194          
The following BLAST results are available for this feature:
BLAST of CK934576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL11_ARATH1.311e-3038.42Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GL31_ARATH2.472e-2943.16Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
AB19B_PRUPE2.472e-2940.51Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
AB19A_PRUPE9.392e-2941.05Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL34_ARATH1.356e-2741.42Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
ABP20_PRUPE1.771e-2740.00Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GL33_ARATH3.021e-2743.23Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GLP1_SINAL3.946e-2743.87Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GLP1_BRANA6.731e-2740.53Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
GL111_ORYSJ1.958e-2639.43Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934576 ID=CK934576; Name=CK934576; organism=Citrus sinensis; type=EST; length=722bp
GGGGAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGAC
TTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGC
TTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATG
TCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAG
TTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGG
GCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAG
ATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCA
TTCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCC
CCGTGCCACCAAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTT
TTGTGACATCACACCAACTGAATAACACACTCATCGCAAAAGTTCTAAAT
AAGGGAGATGTTTTTGTGTTTCCACGAGGTTTGATTCACTTCCAATTCAA
CATTGGAAAAACAAATGCATCTGCCTATTCTGCTCTAAACAGCCAATTCC
CGGGTGAAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATC
AATCCCGATTTTCTTGGCAAGGCATTCCACTTGGACCCAAAGATAGTGAA
AGATCTTCAAAATAAGTTCATT
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